scipion-em/scipion-em-aretomo issues and pull requests

#105 - Streaming fixed: updates correctly the new input

Pull Request - State: closed - Opened by danielmarchan3 9 days ago
Labels: bug

#104 - Release 3.10.0

Pull Request - State: closed - Opened by JorMaister 2 months ago

#103 - Fix indirect pointers

Pull Request - State: closed - Opened by JorMaister 2 months ago

#102 - Relax tests angular tolerance

Pull Request - State: closed - Opened by JorMaister 2 months ago

#101 - failing tests

Issue - State: closed - Opened by azazellochg 3 months ago - 2 comments

#100 - remove all old versions

Pull Request - State: closed - Opened by azazellochg 3 months ago

#99 - Jj renew tests add excluded views

Pull Request - State: closed - Opened by JorMaister 4 months ago - 3 comments

#98 - release 3.9.5

Pull Request - State: closed - Opened by azazellochg 4 months ago

#97 - Added missing protocol lock

Pull Request - State: closed - Opened by oierlauzi 4 months ago - 1 comment

#96 - Removed extra indentation level from sleep in stepsGeneratorStep

Pull Request - State: closed - Opened by oierlauzi 4 months ago

#95 - add new version

Pull Request - State: closed - Opened by azazellochg 5 months ago

#94 - add aretomo2 1.1.3 binaries

Issue - State: closed - Opened by azazellochg 5 months ago

#93 - adding logo

Pull Request - State: closed - Opened by Vilax 6 months ago

#92 - Release 3.9.4

Pull Request - State: closed - Opened by JorMaister 6 months ago

#91 - fix #84

Pull Request - State: closed - Opened by azazellochg 6 months ago

#90 - Aretomo is not working in streaming

Issue - State: open - Opened by danielmarchan3 7 months ago - 2 comments
Labels: bug

#89 - Aretomo reconstruction is not working when you enter with Imod alignment

Issue - State: closed - Opened by danielmarchan3 7 months ago - 9 comments
Labels: bug

#88 - hotfix

Pull Request - State: closed - Opened by azazellochg 7 months ago

#87 - Jj fix define var class method

Pull Request - State: closed - Opened by JorMaister 7 months ago

#86 - Protocol failed: All the introduced Tilt Series were not correctly aligned and/or all the corresponding tomograms were not correctly generated.

Issue - State: closed - Opened by TomCrey 7 months ago - 6 comments
Labels: bug

#85 - Tomo reconstruction: ask if reconstruct the tomograms even/odd are desiredto be reconstructed

Issue - State: closed - Opened by JorMaister 7 months ago - 4 comments
Labels: enhancement

#84 - test fails

Issue - State: closed - Opened by azazellochg 7 months ago - 4 comments

#83 - add aretomo3

Issue - State: open - Opened by azazellochg 7 months ago

#82 - force enable DW when saving extra output

Pull Request - State: closed - Opened by azazellochg 8 months ago

#81 - Jj remove decorator

Pull Request - State: closed - Opened by JorMaister 8 months ago - 6 comments

#80 - 3.9.2

Pull Request - State: closed - Opened by azazellochg 8 months ago - 1 comment

#79 - Jj fix in failed ts

Pull Request - State: closed - Opened by JorMaister 8 months ago

#78 - Minor changes.

Pull Request - State: closed - Opened by pconesa 8 months ago

#77 - Jj tolerate failed ts

Pull Request - State: closed - Opened by JorMaister 8 months ago

#76 - Tolerate failing TS

Issue - State: closed - Opened by JorMaister 8 months ago

#75 - release devel

Pull Request - State: closed - Opened by azazellochg 9 months ago - 1 comment

#74 - dose-weighting not working

Issue - State: closed - Opened by azazellochg 9 months ago
Labels: bug

#73 - removing non interpolated from the output

Pull Request - State: closed - Opened by Vilax 9 months ago - 10 comments

#72 - Added option to provide AlignZ value per tilt-series via text file

Pull Request - State: closed - Opened by rdrighetto 9 months ago

#71 - 3.9.1

Pull Request - State: closed - Opened by azazellochg 10 months ago

#70 - Jj back comp patch

Pull Request - State: closed - Opened by JorMaister 10 months ago

#69 - add 1.1.2 binary

Pull Request - State: closed - Opened by azazellochg 10 months ago

#68 - Update the acquisition order in the CTFTomo objects

Pull Request - State: closed - Opened by JorMaister 11 months ago

#67 - Improve tests

Pull Request - State: closed - Opened by JorMaister 11 months ago - 10 comments

#66 - add missing requirements.txt

Pull Request - State: closed - Opened by azazellochg 11 months ago

#65 - Jj acq fixes

Pull Request - State: closed - Opened by JorMaister 12 months ago

#64 - 3.9.0

Pull Request - State: closed - Opened by azazellochg 12 months ago

#63 - fix prerequisites

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#62 - Jj output ctf

Pull Request - State: closed - Opened by JorMaister about 1 year ago - 7 comments

#61 - Snding master 2 devel

Pull Request - State: closed - Opened by pconesa about 1 year ago

#60 - 3.8.2: bugfix: tomograms origin fixed and more robust

Pull Request - State: closed - Opened by pconesa about 1 year ago

#59 - fix aln parsing again :)

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#58 - 3.8

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#57 - add extra output

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#56 - Generate CTF Tomoseries ?

Issue - State: closed - Opened by pconesa about 1 year ago - 3 comments

#55 - fix new max_rows behaviour

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#54 - output aln format changed again in aretomo2

Issue - State: closed - Opened by azazellochg about 1 year ago - 1 comment
Labels: bug

#53 - add aretomo2

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#52 - 3.7.2

Pull Request - State: closed - Opened by azazellochg about 1 year ago

#51 - Fix origin of tomograms when there is binning.

Pull Request - State: closed - Opened by pconesa about 1 year ago

#50 - cannot correct the CTF after Aretomo alignment

Issue - State: closed - Opened by Vilax over 1 year ago - 10 comments

#49 - close #48

Pull Request - State: closed - Opened by azazellochg over 1 year ago

#48 - new requirements.txt file

Issue - State: closed - Opened by albertmena over 1 year ago

#47 - 3.6.6

Pull Request - State: closed - Opened by azazellochg over 1 year ago

#46 - AreTomo in streaming

Pull Request - State: closed - Opened by albertmena over 1 year ago

#45 - 3.6.5

Pull Request - State: closed - Opened by azazellochg over 1 year ago

#44 - Running areTomo with CUDA 10.2

Issue - State: closed - Opened by albertmena almost 2 years ago - 4 comments

#43 - small refactoring

Pull Request - State: closed - Opened by azazellochg almost 2 years ago

#42 - 3.6.2

Pull Request - State: closed - Opened by azazellochg almost 2 years ago

#41 - 3.6.1

Pull Request - State: closed - Opened by azazellochg almost 2 years ago - 2 comments

#40 - 3.6

Pull Request - State: closed - Opened by azazellochg about 2 years ago

#39 - 3.5.1

Pull Request - State: closed - Opened by azazellochg about 2 years ago

#38 - add aretomo 1.3.3

Pull Request - State: closed - Opened by azazellochg about 2 years ago

#37 - add aretomo 1.3.3

Issue - State: closed - Opened by azazellochg about 2 years ago

#36 - aretomo seems to do not align well

Issue - State: closed - Opened by Vilax about 2 years ago - 1 comment
Labels: bug

#35 - Allow unsorted ts

Pull Request - State: closed - Opened by pconesa about 2 years ago - 5 comments

#34 - 3.5

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#33 - refactor output aln parsing

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#32 - always output TS+alignment

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#31 - output TS always

Issue - State: closed - Opened by azazellochg over 2 years ago - 1 comment
Labels: enhancement

#30 - 3.3

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#29 - 3.2

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#28 - 3.1

Pull Request - State: closed - Opened by azazellochg over 2 years ago - 1 comment

#27 - refactor output handling

Pull Request - State: closed - Opened by azazellochg over 2 years ago - 1 comment

#26 - add v1.2.0

Pull Request - State: closed - Opened by azazellochg over 2 years ago - 1 comment