scikit-image/scikit-image issues and pull requests

#7608 - Explicitly setup conda on macos for wheel building

Pull Request - State: open - Opened by lagru 3 days ago - 1 comment
Labels: :robot: type: Infrastructure

#7607 - Missing scikit-image nightly wheels on MacOS

Issue - State: open - Opened by phofl 4 days ago - 6 comments
Labels: :warning: Priority, :robot: type: Infrastructure

#7606 - fix typo in morphology doc

Pull Request - State: open - Opened by rickymwalsh 4 days ago

#7605 - Incorrect data range on SSIM metric example code

Issue - State: open - Opened by Gigarrum 5 days ago - 1 comment
Labels: :bug: Bug

#7604 - MCP max_cost and max_cummulative_cost parameters do nothing

Issue - State: open - Opened by helvince 7 days ago
Labels: :bug: Bug

#7603 - Resize calls scipy.ndimage.zoom with prefilter even if already filtered

Issue - State: open - Opened by Aonnghus 10 days ago
Labels: :bug: Bug

#7602 - <skimage resize yields different output shapes for same input shape of different images>

Issue - State: open - Opened by postnubilaphoebus 10 days ago - 1 comment
Labels: :bug: Bug

#7601 - Bump `changelist` to v0.5

Pull Request - State: closed - Opened by Schefflera-Arboricola 12 days ago
Labels: :wrench: type: Maintenance

#7600 - The result of skimage.measure.label is different from the result of bwlabel in MATLAB

Issue - State: closed - Opened by kjz1997 12 days ago - 1 comment
Labels: :people_hugging: Support

#7599 - Update blur effect tests.

Pull Request - State: open - Opened by mkcor 18 days ago
Labels: :adhesive_bandage: type: Bug fix

#7598 - Update _blur_effect.py

Pull Request - State: open - Opened by scrimpys 18 days ago - 8 comments
Labels: :adhesive_bandage: type: Bug fix

#7597 - skimage measure blur only throws a Warning and not an Exception in cases where the image is all zeros

Issue - State: open - Opened by scrimpys 19 days ago - 5 comments
Labels: :beginner: Good first issue, :bug: Bug

#7596 - Unable in install scikit-image in python 3.13 "error while generating package metadata."

Issue - State: open - Opened by tifdes 23 days ago - 2 comments
Labels: :bug: Bug

#7595 - Drop Python 3.10 support

Pull Request - State: open - Opened by jarrodmillman 23 days ago
Labels: :wrench: type: Maintenance

#7594 - Don't check test coverage in CI

Pull Request - State: closed - Opened by lagru 23 days ago
Labels: :robot: type: Infrastructure

#7593 - Build docs in parallel instead of sequentially on Azure

Pull Request - State: open - Opened by lagru 23 days ago
Labels: :robot: type: Infrastructure

#7592 - combine radon and iradon makes the image blurred

Issue - State: open - Opened by argman 24 days ago - 3 comments
Labels: :bug: Bug

#7592 - combine radon and iradon makes the image blurred

Issue - State: open - Opened by argman 24 days ago
Labels: :bug: Bug

#7591 - A simple replacement of matlab imcrop

Issue - State: open - Opened by pskeshu 26 days ago - 6 comments
Labels: :pray: Feature request

#7590 - Update documentation dependencies

Pull Request - State: closed - Opened by jarrodmillman 26 days ago
Labels: :wrench: type: Maintenance

#7589 - [BUG, DOC]: Updated the Image Deconvolution example

Pull Request - State: open - Opened by Schefflera-Arboricola 26 days ago - 3 comments
Labels: :adhesive_bandage: type: Bug fix

#7588 - Update structural similarity

Pull Request - State: closed - Opened by lukasbehammer 26 days ago - 2 comments

#7587 - Update build dependencies

Pull Request - State: closed - Opened by jarrodmillman 27 days ago
Labels: :wrench: type: Maintenance

#7586 - Update minimum supported pyamg

Pull Request - State: closed - Opened by jarrodmillman 27 days ago - 1 comment
Labels: :wrench: type: Maintenance

#7585 - KeyError in _regionprops.py during Documentation Installation (debug) in Python 3.13

Issue - State: open - Opened by ticdenis 27 days ago - 4 comments

#7584 - Implement color quantization (e.g. rgb2ind)

Issue - State: open - Opened by pyrr 29 days ago
Labels: :pray: Feature request

#7583 - macOS 12 runner image will be removed by 2024-03-12

Issue - State: closed - Opened by lagru 29 days ago - 1 comment
Labels: :computer: Arch specific, :robot: type: Infrastructure, :arrow_down_small: Deprecation

#7582 - CI: bump macos image pin from 12 to 13

Pull Request - State: closed - Opened by bsipocz about 1 month ago - 1 comment
Labels: :wrench: type: Maintenance

#7581 - Fix formatting issues

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7580 - Update ruff linter / formatter

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7579 - Build sphinx documentation with parallel jobs

Pull Request - State: closed - Opened by lagru about 1 month ago
Labels: :robot: type: Infrastructure

#7578 - Test Py3.13 on windows

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7577 - Skimage.graph: knight's move neighbourhood

Issue - State: open - Opened by zoran-cuckovic about 1 month ago - 4 comments
Labels: :pray: Feature request

#7576 - Use scipy.sparse arrays

Pull Request - State: open - Opened by jarrodmillman about 1 month ago - 15 comments
Labels: :scroll: type: API

#7575 - Build cp313t linux wheels

Pull Request - State: open - Opened by jarrodmillman about 1 month ago
Labels: :fast_forward: type: Enhancement

#7574 - Remove deprecated gaussian output parameter

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7573 - Update TODO

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7572 - Remove deprecated skeletonize_3d

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :scroll: type: API

#7571 - Build Python 3.13 wheels

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago - 1 comment
Labels: :wrench: type: Maintenance

#7570 - Test NX 3.4rc0

Pull Request - State: closed - Opened by jarrodmillman about 1 month ago
Labels: :wrench: type: Maintenance

#7569 - Ensure that `RegionProperties` can be deserialized with pickle

Pull Request - State: closed - Opened by lagru about 1 month ago - 2 comments
Labels: :adhesive_bandage: type: Bug fix

#7568 - stacklevel used by `deprecate_func` seems wrong

Issue - State: open - Opened by lagru about 1 month ago - 2 comments
Labels: :question: Needs info, :bug: Bug

#7567 - Fix missing minigalleries by using full names in directives

Pull Request - State: closed - Opened by lagru about 1 month ago
Labels: :wrench: type: Maintenance, :warning: Priority

#7566 - Replace `square`, `rectangle`, `cube` with `footprint_rectangular`

Pull Request - State: open - Opened by lagru about 1 month ago - 5 comments
Labels: :arrow_down_small: Deprecation, :scroll: type: API, :hiking_boot: Path to skimage2

#7565 - Support Python 3.13

Pull Request - State: closed - Opened by jarrodmillman about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance

#7564 - Image deconvolution example - fix to make the example code scientifically sensible

Issue - State: open - Opened by jmtayloruk about 2 months ago - 2 comments
Labels: :bug: Bug

#7563 - `skimage.restoration.utf` module should be private

Issue - State: open - Opened by lagru about 2 months ago - 4 comments
Labels: :scroll: type: API

#7562 - Update minimum dependencies (SPEC 0)

Pull Request - State: closed - Opened by jarrodmillman about 2 months ago
Labels: :wrench: type: Maintenance

#7561 - Drop Python 3.9 support

Pull Request - State: closed - Opened by jarrodmillman about 2 months ago
Labels: :wrench: type: Maintenance

#7560 - Update pre-commit versions

Pull Request - State: closed - Opened by jarrodmillman about 2 months ago
Labels: :wrench: type: Maintenance

#7559 - Inquiry About Deploying scikit-image Website in China

Issue - State: closed - Opened by PmcFizz about 2 months ago - 3 comments
Labels: :pray: Feature request

#7558 - Hide traceback inside `assert_stacklevel`

Pull Request - State: closed - Opened by lagru about 2 months ago
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7557 - Remove unused PYX files in io/_plugins

Pull Request - State: open - Opened by lagru about 2 months ago
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7557 - Remove unused PYX files in io/_plugins

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7556 - Don't use deprecated `io.show` and `io.imshow`

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance, :arrow_down_small: Deprecation, :rocket: Quick win

#7555 - Use pytest config in pyroject.toml in CI

Pull Request - State: open - Opened by lagru about 2 months ago
Labels: :robot: type: Infrastructure

#7554 - Pytest config in pyproject.toml isn't used in CI

Issue - State: open - Opened by lagru about 2 months ago
Labels: :robot: type: Infrastructure, :bug: Bug

#7553 - `io.imread_collection_wrapper` should be private / deprecated

Issue - State: open - Opened by lagru about 2 months ago
Labels: :arrow_down_small: Deprecation, :scroll: type: API

#7552 - Preserve value of deprecated parameters without replacement

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance, :+1: 1st approval

#7551 - Account for empty arrays when counting segments per contour level.

Pull Request - State: closed - Opened by mkcor about 2 months ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7550 - META Backend dispatching discussion

Issue - State: open - Opened by betatim about 2 months ago

#7549 - Render paragraphs in dormant message

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :robot: type: Infrastructure, :rocket: Quick win

#7548 - Improve performance of `peak_local_max` and feature detectors that rely on it

Pull Request - State: open - Opened by grlee77 about 2 months ago - 1 comment
Labels: :chart_with_upwards_trend: type: Performance

#7547 - MacOS runners seem to have libomp already installed

Pull Request - State: open - Opened by stefanv about 2 months ago - 2 comments
Labels: :wrench: type: Maintenance

#7546 - Generate typing stubs with docstub

Pull Request - State: open - Opened by lagru 2 months ago
Labels: :robot: type: Infrastructure

#7545 - Update up/download artifact version

Pull Request - State: closed - Opened by stefanv 2 months ago - 4 comments
Labels: :wrench: type: Maintenance

#7544 - feat: add mask parameter to graycomatrix function for selective computation

Pull Request - State: open - Opened by faisaljayousi 2 months ago - 8 comments
Labels: :baby: type: New feature

#7543 - Back-references for sphinx gallery examples are missing in dev docs

Issue - State: closed - Opened by lagru 2 months ago - 1 comment
Labels: :page_facing_up: type: Documentation, :question: Needs info, :bug: Bug

#7542 - CircleCI redirection is broken due to invalid JSON response

Issue - State: open - Opened by lagru 2 months ago - 1 comment
Labels: :robot: type: Infrastructure, :arrow_up: Upstream, :bug: Bug

#7541 - Feature/enhance plot matched features

Pull Request - State: closed - Opened by michaelbratsch 2 months ago - 6 comments
Labels: :fast_forward: type: Enhancement, :+1: 1st approval

#7540 - Import `lazy_loader` as private symbol in top-level namespaces

Pull Request - State: closed - Opened by kushaangupta 2 months ago - 3 comments
Labels: :wrench: type: Maintenance

#7539 - Polluted namespace by lazy loader

Issue - State: closed - Opened by kushaangupta 2 months ago
Labels: :bug: Bug

#7538 - Set -DNPY_NO_DEPRECATED_API=NPY_1_23_API_VERSION on build

Pull Request - State: closed - Opened by stefanv 2 months ago - 5 comments
Labels: :wrench: type: Maintenance

#7537 - Update plot_regionprops.py

Pull Request - State: open - Opened by pamitabh 2 months ago
Labels: :page_facing_up: type: Documentation

#7536 - Add SPEC badges to README

Pull Request - State: closed - Opened by stefanv 2 months ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7535 - Allow read-only arrays as input to remap

Pull Request - State: open - Opened by stefanv 2 months ago - 1 comment
Labels: :adhesive_bandage: type: Bug fix

#7534 - Improve stability of `local_minima`

Pull Request - State: closed - Opened by michaelbratsch 2 months ago - 1 comment
Labels: :fast_forward: type: Enhancement, :rocket: Quick win, :+1: 1st approval

#7533 - Measure region properties example has an error that misses hover over label for first mask

Issue - State: open - Opened by abockhughes 2 months ago - 2 comments
Labels: :beginner: Good first issue, :page_facing_up: type: Documentation

#7532 - Update spin (0.12)

Pull Request - State: closed - Opened by jarrodmillman 2 months ago
Labels: :wrench: type: Maintenance

#7531 - Docs: segmentation examples edited to comply with matplotlib oo-style

Pull Request - State: open - Opened by GParolini 2 months ago
Labels: :page_facing_up: type: Documentation

#7530 - local_minima output wrong with numpy 2.0.2

Issue - State: closed - Opened by haesleinhuepf 2 months ago - 4 comments
Labels: :bug: Bug

#7529 - Remove deprecated function usage from gallery

Issue - State: open - Opened by stefanv 2 months ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7528 - SSIM Modifications - Documentation Transparency and Return Consistency

Pull Request - State: open - Opened by svarqq 2 months ago - 5 comments
Labels: :fast_forward: type: Enhancement

#7527 - Added fset validator to `keypoints` in `skimage.feature.SIFT`

Pull Request - State: closed - Opened by tamimfatahi 2 months ago - 1 comment

#7526 - Adding descriptor extractors given keypoints to `skimage.feature.SIFT`

Issue - State: open - Opened by tamimfatahi 2 months ago - 6 comments
Labels: :pray: Feature request

#7525 - Fix OpenBLAS `s_cmp` unresolved symbol error, update Emscripten CI testing

Pull Request - State: closed - Opened by agriyakhetarpal 3 months ago - 1 comment
Labels: :robot: type: Infrastructure

#7524 - transform.resize does not necessarily return the same dtype as its input

Issue - State: open - Opened by pozdniakovda 3 months ago - 1 comment
Labels: :people_hugging: Support

#7523 - Improve docstring for Wiener restoration function.

Pull Request - State: open - Opened by mkcor 3 months ago
Labels: :page_facing_up: type: Documentation

#7522 - Tweak advice to new developers; remove AI warning

Pull Request - State: closed - Opened by stefanv 3 months ago
Labels: :page_facing_up: type: Documentation

#7521 - promote 8 and 16-bit integer dtypes to float32

Pull Request - State: open - Opened by grlee77 3 months ago - 1 comment
Labels: :chart_with_upwards_trend: type: Performance

#7520 - Basic infrastructure for dispatching to a backend

Pull Request - State: open - Opened by betatim 3 months ago - 26 comments
Labels: :baby: type: New feature

#7519 - Reorder items in TODO list.

Pull Request - State: closed - Opened by mkcor 3 months ago - 2 comments
Labels: :wrench: type: Maintenance

#7518 - Further document use of regionprops function and fix terms.

Pull Request - State: open - Opened by mkcor 3 months ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7517 - Fix docstring math rendering in `manders_coloc_coeff`

Pull Request - State: open - Opened by stefanv 3 months ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7516 - Math display rendering is broken.

Issue - State: open - Opened by mkcor 3 months ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7515 - Use correct `spin test --coverage` in contribution guide

Pull Request - State: closed - Opened by eriknw 3 months ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7514 - Add spin install

Pull Request - State: closed - Opened by stefanv 3 months ago

#7513 - Adding dispatching to scikit-image

Pull Request - State: open - Opened by Schefflera-Arboricola 3 months ago

#7512 - Ensure only a single `type:` label is present in PRs

Pull Request - State: closed - Opened by stefanv 3 months ago - 5 comments
Labels: :robot: type: Infrastructure

#7511 - Update pydata-sphinx-theme

Pull Request - State: closed - Opened by stefanv 3 months ago - 3 comments
Labels: :robot: type: Infrastructure

GitHub / scikit-image/scikit-image issues and pull requests