scikit-image/scikit-image issues and pull requests

#7558 - Hide traceback inside `assert_stacklevel`

Pull Request - State: closed - Opened by lagru 1 day ago
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7557 - Remove unused PYX files in io/_plugins

Pull Request - State: open - Opened by lagru 1 day ago
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7557 - Remove unused PYX files in io/_plugins

Pull Request - State: open - Opened by lagru 1 day ago
Labels: :wrench: type: Maintenance, :rocket: Quick win

#7556 - Don't use deprecated `io.show` and `io.imshow`

Pull Request - State: closed - Opened by lagru 1 day ago - 1 comment
Labels: :wrench: type: Maintenance, :arrow_down_small: Deprecation, :rocket: Quick win

#7555 - Use pytest config in pyroject.toml in CI

Pull Request - State: open - Opened by lagru 2 days ago
Labels: :robot: type: Infrastructure

#7554 - Pytest config in pyproject.toml isn't used in CI

Issue - State: open - Opened by lagru 2 days ago
Labels: :robot: type: Infrastructure, :bug: Bug

#7553 - `io.imread_collection_wrapper` should be private / deprecated

Issue - State: open - Opened by lagru 3 days ago
Labels: :arrow_down_small: Deprecation, :scroll: type: API

#7552 - Preserve value of deprecated parameters without replacement

Pull Request - State: open - Opened by lagru 3 days ago - 1 comment
Labels: :wrench: type: Maintenance

#7551 - Account for empty arrays when counting segments per contour level.

Pull Request - State: open - Opened by mkcor 4 days ago
Labels: :page_facing_up: type: Documentation

#7550 - META Backend dispatching discussion

Issue - State: open - Opened by betatim 5 days ago

#7549 - Render paragraphs in dormant message

Pull Request - State: open - Opened by lagru 5 days ago
Labels: :robot: type: Infrastructure, :rocket: Quick win

#7548 - Improve performance of `peak_local_max` and feature detectors that rely on it

Pull Request - State: open - Opened by grlee77 7 days ago - 1 comment
Labels: :chart_with_upwards_trend: type: Performance

#7547 - MacOS runners seem to have libomp already installed

Pull Request - State: open - Opened by stefanv 11 days ago - 1 comment
Labels: :wrench: type: Maintenance

#7546 - Generate typing stubs with docstub

Pull Request - State: open - Opened by lagru 12 days ago
Labels: :robot: type: Infrastructure

#7545 - Update up/download artifact version

Pull Request - State: closed - Opened by stefanv 13 days ago - 4 comments
Labels: :wrench: type: Maintenance

#7544 - feat: add mask parameter to graycomatrix function for selective computation

Pull Request - State: open - Opened by faisaljayousi 13 days ago - 2 comments
Labels: :baby: type: New feature

#7543 - Back-references for sphinx gallery examples are missing in dev docs

Issue - State: open - Opened by lagru 14 days ago - 1 comment
Labels: :page_facing_up: type: Documentation, :question: Needs info, :bug: Bug

#7542 - CircleCI redirection is broken due to invalid JSON response

Issue - State: open - Opened by lagru 14 days ago - 1 comment
Labels: :robot: type: Infrastructure, :arrow_up: Upstream, :bug: Bug

#7541 - Feature/enhance plot matched features

Pull Request - State: open - Opened by michaelbratsch 15 days ago - 2 comments
Labels: :fast_forward: type: Enhancement, :+1: 1st approval

#7540 - Import `lazy_loader` as private symbol in top-level namespaces

Pull Request - State: closed - Opened by kushaangupta 16 days ago - 3 comments
Labels: :wrench: type: Maintenance

#7539 - Polluted namespace by lazy loader

Issue - State: closed - Opened by kushaangupta 16 days ago
Labels: :bug: Bug

#7538 - Set -DNPY_NO_DEPRECATED_API=NPY_1_23_API_VERSION on build

Pull Request - State: closed - Opened by stefanv 16 days ago - 5 comments
Labels: :wrench: type: Maintenance

#7537 - Update plot_regionprops.py

Pull Request - State: open - Opened by pamitabh 18 days ago
Labels: :page_facing_up: type: Documentation

#7536 - Add SPEC badges to README

Pull Request - State: closed - Opened by stefanv 18 days ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7535 - Allow read-only arrays as input to remap

Pull Request - State: open - Opened by stefanv 20 days ago - 1 comment
Labels: :adhesive_bandage: type: Bug fix

#7534 - Improve stability of `local_minima`

Pull Request - State: closed - Opened by michaelbratsch 22 days ago - 1 comment
Labels: :fast_forward: type: Enhancement, :rocket: Quick win, :+1: 1st approval

#7533 - Measure region properties example has an error that misses hover over label for first mask

Issue - State: open - Opened by abockhughes 23 days ago - 2 comments
Labels: :beginner: Good first issue, :page_facing_up: type: Documentation

#7532 - Update spin (0.12)

Pull Request - State: closed - Opened by jarrodmillman 23 days ago
Labels: :wrench: type: Maintenance

#7531 - Docs: segmentation examples edited to comply with matplotlib oo-style

Pull Request - State: open - Opened by GParolini 23 days ago

#7530 - local_minima output wrong with numpy 2.0.2

Issue - State: closed - Opened by haesleinhuepf 23 days ago - 4 comments
Labels: :bug: Bug

#7529 - Remove deprecated function usage from gallery

Issue - State: open - Opened by stefanv 24 days ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7528 - SSIM Modifications - Documentation Transparency and Return Consistency

Pull Request - State: open - Opened by svarqq 24 days ago - 5 comments
Labels: :fast_forward: type: Enhancement

#7527 - Added fset validator to `keypoints` in `skimage.feature.SIFT`

Pull Request - State: closed - Opened by tamimfatahi 25 days ago - 1 comment

#7526 - Adding descriptor extractors given keypoints to `skimage.feature.SIFT`

Issue - State: open - Opened by tamimfatahi 25 days ago - 6 comments
Labels: :pray: Feature request

#7525 - Fix OpenBLAS `s_cmp` unresolved symbol error, update Emscripten CI testing

Pull Request - State: closed - Opened by agriyakhetarpal 26 days ago - 1 comment
Labels: :robot: type: Infrastructure

#7524 - transform.resize does not necessarily return the same dtype as its input

Issue - State: open - Opened by pozdniakovda 27 days ago - 1 comment
Labels: :people_hugging: Support

#7523 - Improve docstring for Wiener restoration function.

Pull Request - State: open - Opened by mkcor 28 days ago
Labels: :page_facing_up: type: Documentation

#7522 - Tweak advice to new developers; remove AI warning

Pull Request - State: closed - Opened by stefanv 28 days ago
Labels: :page_facing_up: type: Documentation

#7521 - promote 8 and 16-bit integer dtypes to float32

Pull Request - State: open - Opened by grlee77 28 days ago - 1 comment
Labels: :chart_with_upwards_trend: type: Performance

#7520 - Basic infrastructure for dispatching to a backend

Pull Request - State: open - Opened by betatim 29 days ago - 5 comments
Labels: :baby: type: New feature

#7519 - Reorder items in TODO list.

Pull Request - State: closed - Opened by mkcor 29 days ago - 2 comments
Labels: :wrench: type: Maintenance

#7518 - Further document use of regionprops function and fix terms.

Pull Request - State: open - Opened by mkcor about 1 month ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7517 - Fix docstring math rendering in `manders_coloc_coeff`

Pull Request - State: open - Opened by stefanv about 1 month ago - 2 comments
Labels: :page_facing_up: type: Documentation

#7516 - Math display rendering is broken.

Issue - State: open - Opened by mkcor about 1 month ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7515 - Use correct `spin test --coverage` in contribution guide

Pull Request - State: closed - Opened by eriknw about 1 month ago - 1 comment
Labels: :page_facing_up: type: Documentation

#7514 - Add spin install

Pull Request - State: closed - Opened by stefanv about 1 month ago

#7513 - Adding dispatching to scikit-image

Pull Request - State: open - Opened by Schefflera-Arboricola about 1 month ago

#7512 - Ensure only a single label is present

Pull Request - State: closed - Opened by stefanv about 1 month ago - 5 comments
Labels: :robot: type: Infrastructure

#7511 - Update pydata-sphinx-theme

Pull Request - State: closed - Opened by stefanv about 1 month ago - 3 comments
Labels: :robot: type: Infrastructure

#7510 - Fix build dependency

Pull Request - State: closed - Opened by stefanv about 1 month ago - 2 comments
Labels: :wrench: type: Maintenance

#7509 - Don't test thresholding funcs for Dask compatibility

Pull Request - State: closed - Opened by stefanv about 1 month ago - 2 comments
Labels: :wrench: type: Maintenance

#7508 - Deprecate io.{imshow,imshow_collection,show}

Pull Request - State: closed - Opened by stefanv about 1 month ago - 2 comments
Labels: :arrow_down_small: Deprecation, :scroll: type: API

#7507 - Bump spin version to 0.11

Pull Request - State: closed - Opened by mkcor about 1 month ago - 2 comments
Labels: :robot: type: Infrastructure

#7506 - Module Not Found Error

Issue - State: open - Opened by cyberfantics about 1 month ago - 1 comment
Labels: :people_hugging: Support

#7505 - Move from CITATION.bib to CITATION.cff

Pull Request - State: closed - Opened by stefanv about 1 month ago - 5 comments
Labels: :page_facing_up: type: Documentation

#7504 - `io.show` only shows the last image on macOS (M2)

Issue - State: open - Opened by pantheraleo-7 about 1 month ago - 3 comments
Labels: :bug: Bug

#7503 - Use SciPy to create Euler rotation matrices

Pull Request - State: closed - Opened by michaelbratsch about 1 month ago - 4 comments
Labels: :wrench: type: Maintenance

#7502 - Exclude imageio 2.35.0 that forces numpy downgrade

Pull Request - State: closed - Opened by stefanv about 1 month ago - 3 comments
Labels: :wrench: type: Maintenance

#7501 - Update deprecated configuration

Pull Request - State: closed - Opened by stefanv about 1 month ago - 2 comments
Labels: :robot: type: Infrastructure

#7500 - One of our doc dependencies brings in numpy < 2

Issue - State: closed - Opened by stefanv about 1 month ago - 3 comments
Labels: :wrench: type: Maintenance

#7499 - Error in saving the resulting image of denoise wavelet

Issue - State: closed - Opened by ibilgen about 1 month ago - 2 comments
Labels: :bug: Bug

#7498 - About the PyWavelets not installed error

Issue - State: closed - Opened by ibilgen about 1 month ago - 2 comments
Labels: :pray: Feature request

#7497 - `test_ellipse_model_estimate_failers` fails on master for Mac M1 (arm64)

Issue - State: open - Opened by michaelbratsch about 2 months ago - 7 comments
Labels: :bug: Bug

#7496 - Fix dynamic max trials of RANSAC (follow up)

Pull Request - State: closed - Opened by michaelbratsch about 2 months ago - 2 comments
Labels: :adhesive_bandage: type: Bug fix

#7495 - Remove unused and deprecated dependency pytest-runner

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance

#7494 - pytest-runner deprecated?

Issue - State: closed - Opened by stefanv about 2 months ago - 1 comment
Labels: :wrench: type: Maintenance

#7493 - Temporarily exclude Dask 2024.8.0 to fix CI

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :robot: type: Infrastructure, :rocket: Quick win

#7492 - Uncomment `currentmodule` directive again

Pull Request - State: closed - Opened by lagru about 2 months ago
Labels: :robot: type: Infrastructure, :rocket: Quick win

#7491 - `filters.threshold_triangle` fails for Dask 2024.8 with "unkown chunk size"

Issue - State: closed - Opened by lagru about 2 months ago - 2 comments
Labels: :arrow_up: Upstream, :bug: Bug

#7490 - Improve robustness of _dynamic_max_trials used for ransac

Pull Request - State: closed - Opened by michaelbratsch about 2 months ago - 1 comment

#7489 - Strange description in docstring

Issue - State: closed - Opened by patrick-nicodemus about 2 months ago

#7488 - Added option to _not_ normalize the output from the HOG function

Pull Request - State: open - Opened by Klest94 about 2 months ago - 2 comments
Labels: :fast_forward: type: Enhancement

#7487 - Complete deprecation of `plot_matches`

Pull Request - State: closed - Opened by lagru about 2 months ago - 7 comments
Labels: :scroll: type: API, :+1: 1st approval

#7486 - Address autosummary.import_cycle warning

Pull Request - State: closed - Opened by lagru about 2 months ago - 1 comment
Labels: :robot: type: Infrastructure

#7485 - autosummary.import_cycle warning breaks doc build on Windows CI

Issue - State: closed - Opened by lagru about 2 months ago - 4 comments
Labels: :robot: type: Infrastructure, :bug: Bug

#7484 - Backend QtAgg is interactive backend. Turning interactive mode on.

Issue - State: open - Opened by haferburg about 2 months ago - 4 comments
Labels: :question: Needs info, :bug: Bug

#7483 - Fixup conda development installation instructions

Pull Request - State: closed - Opened by hmaarrfk about 2 months ago - 3 comments
Labels: :page_facing_up: type: Documentation

#7482 - FIX Use python3 in Meson version script shebang

Pull Request - State: closed - Opened by lesteve about 2 months ago - 2 comments
Labels: :wrench: type: Maintenance

#7481 - Add CI to release nightly free-threaded wheels

Pull Request - State: closed - Opened by andfoy about 2 months ago - 4 comments
Labels: :robot: type: Infrastructure, :+1: 1st approval

#7480 - Recommend only venv-based dev environment (drop conda)

Pull Request - State: closed - Opened by lagru about 2 months ago - 8 comments
Labels: :page_facing_up: type: Documentation

#7479 - Feature/add rotation to draw ellipsoid

Pull Request - State: closed - Opened by pamitabh 2 months ago - 22 comments
Labels: :fast_forward: type: Enhancement

#7478 - Setting up conda environment for development of skimage throws a package not found error

Issue - State: closed - Opened by pamitabh 2 months ago - 5 comments
Labels: :bug: Bug

#7477 - Improved the documentation of the restoration.richardson_lucy deconvolution function

Pull Request - State: closed - Opened by geeanlooca 2 months ago - 6 comments
Labels: :page_facing_up: type: Documentation

#7476 - Make sure `array(..., copy=True)` returns copies

Issue - State: open - Opened by lagru 2 months ago
Labels: :bug: Bug

#7475 - Explore faster implementations of median filter

Issue - State: open - Opened by lagru 2 months ago - 2 comments
Labels: :chart_with_upwards_trend: type: Performance, :ice_cube: Backburner

#7474 - Unexpected Core Dump When Executing inpaint_biharmonic

Issue - State: closed - Opened by montgomerymao 2 months ago - 8 comments
Labels: :bug: Bug

#7473 - Handle degeneracy in spheroid surface area formula

Pull Request - State: closed - Opened by stefanv 2 months ago - 4 comments
Labels: :adhesive_bandage: type: Bug fix

#7472 - skimage.draw.ellipsoid_stats doesn't give the result for a sphere if a=b=c

Issue - State: closed - Opened by pamitabh 2 months ago - 18 comments
Labels: :bug: Bug

#7471 - Decide on the GitHub Projects

Issue - State: open - Opened by soupault 2 months ago - 5 comments
Labels: :balance_scale: Needs decision

#7470 - Reduce size of PyPi wheels

Issue - State: open - Opened by stefanv 2 months ago - 1 comment
Labels: :pray: Feature request

#7469 - Prevent `skimage.morphology.thin` from modifying input array

Pull Request - State: closed - Opened by decorouz 2 months ago - 3 comments
Labels: :adhesive_bandage: type: Bug fix

#7468 - Create cmake-multi-platform.yml

Pull Request - State: closed - Opened by JoftheV 2 months ago - 1 comment
Labels: :question: Needs info

#7467 - AffineTransform implements no affine specific `estimate` method (but silently applies that inherited from `ProjectiveTransform`)

Issue - State: closed - Opened by m-albert 3 months ago - 1 comment
Labels: :bug: Bug

GitHub / scikit-image/scikit-image issues and pull requests