Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / sbgn/libsbgn issues and pull requests
#65 - Improve Usability with SBML models
Issue -
State: open - Opened by shoepfl almost 2 years ago
- 4 comments
#64 - Bump xalan from 2.7.0 to 2.7.2
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#63 - Bump xercesImpl from 2.11.0 to 2.12.2
Pull Request -
State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies
#62 - Use `emptyset` rather than `source and sink`
Issue -
State: open - Opened by fbergmann over 3 years ago
#61 - Bump junit from 4.12 to 4.13.1
Pull Request -
State: closed - Opened by dependabot[bot] about 4 years ago
Labels: dependencies
#60 - Bump xercesImpl from 2.11.0 to 2.12.0
Pull Request -
State: closed - Opened by dependabot[bot] over 4 years ago
- 1 comment
Labels: dependencies
#59 - Encoding issue
Pull Request -
State: closed - Opened by piotr-gawron over 4 years ago
- 4 comments
#58 - Saxon upgrade
Pull Request -
State: closed - Opened by piotr-gawron over 4 years ago
- 5 comments
#57 - Conflicting library version in maven dependency.
Issue -
State: open - Opened by piotr-gawron almost 5 years ago
#56 - Switch to Github Packages
Issue -
State: open - Opened by cannin about 5 years ago
Labels: enhancement
#55 - Extension: added new Equivalence operator from PD L1V2.0 spec
Pull Request -
State: closed - Opened by tczauderna over 5 years ago
- 2 comments
#54 - Incorrect SBGN file format following writing the render information
Issue -
State: open - Opened by ibalaur over 5 years ago
- 5 comments
#53 - Problems writing render extension, set DocumentBuilderFactory in SbgnUtil.addAnnotation namespace aware?
Issue -
State: open - Opened by tczauderna over 5 years ago
- 2 comments
Labels: question
#52 - Suggestion: Font style property to be exposed via the RenderUtil class
Issue -
State: closed - Opened by ibalaur over 5 years ago
- 3 comments
Labels: enhancement
#51 - Question on high level validation, ruleId=pd10112: if there are compartments defined, top-level glyphs must have a compartmentRef.
Issue -
State: open - Opened by ibalaur over 5 years ago
- 2 comments
#50 - Suggestion: function to convert from 3.0 to 2.0 to be provided
Issue -
State: open - Opened by ibalaur over 5 years ago
#49 - SbgnUtil.readFrom(InputStream is) fails when conversion from Milestone 1 or 2 necessary
Issue -
State: open - Opened by tczauderna over 5 years ago
- 2 comments
#48 - Added exception handling when getting JAXB context
Pull Request -
State: closed - Opened by tczauderna over 5 years ago
#47 - Proposal to allow double colon (i.e. "::") to be used inside a glyph id
Issue -
State: closed - Opened by ibalaur over 5 years ago
- 4 comments
#46 - maven build not working on some systems
Issue -
State: open - Opened by fbergmann over 5 years ago
- 1 comment
#45 - port ant script to maven
Issue -
State: closed - Opened by fbergmann over 5 years ago
- 3 comments
Labels: help wanted
#44 - utility classes for creating / accessing render elements
Issue -
State: open - Opened by fbergmann almost 6 years ago
Labels: Milestone 3
#43 - clone / notes examples
Issue -
State: open - Opened by fbergmann almost 6 years ago
Labels: Milestone 3
#42 - Schema not found
Issue -
State: open - Opened by yun-vis over 6 years ago
- 1 comment
#41 - Compile problem: error: Source option 1.5 is no longer supported. Use 1.6 or later
Issue -
State: closed - Opened by ibalaur about 7 years ago
- 1 comment
#40 - Update annotation.sbgn
Pull Request -
State: closed - Opened by haleyyew over 7 years ago
- 2 comments
#39 - More flexible parse functions with support for InputStreams
Issue -
State: closed - Opened by draeger about 8 years ago
- 1 comment
Labels: help wanted
#38 - Ant tests failing
Issue -
State: closed - Opened by matthiaskoenig about 8 years ago
- 3 comments
Labels: Milestone 3
#37 - Specification documentation & javadocs for v0.3
Pull Request -
State: closed - Opened by matthiaskoenig about 8 years ago
#36 - Updated documentation & build instructions
Pull Request -
State: closed - Opened by matthiaskoenig about 8 years ago
#35 - v0.3-SNAPSHOT
Issue -
State: closed - Opened by matthiaskoenig about 8 years ago
- 3 comments
#34 - Create specification docs for v0.3-SNAPSHOT
Issue -
State: closed - Opened by matthiaskoenig about 8 years ago
- 1 comment
#33 - Create javadocs for v0.2 and v0.3-SNAPSHOT & host somewhere
Issue -
State: closed - Opened by matthiaskoenig about 8 years ago
- 1 comment
#32 - Develop
Pull Request -
State: closed - Opened by matthiaskoenig about 8 years ago
#31 - Add license
Issue -
State: closed - Opened by matthiaskoenig about 8 years ago
- 2 comments
#30 - Serializations not created in C++ bindings
Issue -
State: closed - Opened by cannin about 12 years ago
- 5 comments
Labels: sourceforge, auto-migrated, Milestone 2, Library
#29 - phenotype / observable class for ER maps
Issue -
State: closed - Opened by cannin about 13 years ago
- 1 comment
Labels: Markup Language, sourceforge, auto-migrated, Milestone 2
#28 - Custom Annotations warrant higher priority
Issue -
State: closed - Opened by cannin over 13 years ago
- 1 comment
Labels: Markup Language, sourceforge, auto-migrated, Milestone 2
#27 - drawing order of overlapping compartments in PD
Issue -
State: closed - Opened by cannin over 13 years ago
- 6 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 2
#26 - enum with string constants
Issue -
State: closed - Opened by cannin over 13 years ago
- 2 comments
Labels: sourceforge, auto-migrated, Milestone 2, Library
#25 - ids on arcs?
Issue -
State: closed - Opened by cannin over 13 years ago
- 6 comments
Labels: sourceforge, auto-migrated, Milestone 2
#24 - STAT1 alpha get's converted to STAT1α
Issue -
State: closed - Opened by cannin almost 14 years ago
- 6 comments
Labels: sourceforge, auto-migrated, Milestone 2, Library
#23 - Compartment containment
Issue -
State: closed - Opened by cannin almost 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 2
#22 - Unit of information label = prefix + value
Issue -
State: open - Opened by cannin about 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#21 - Proposal for text styles
Issue -
State: open - Opened by cannin about 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#20 - definition of starting point / end point for arcs
Issue -
State: closed - Opened by cannin about 14 years ago
- 3 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#19 - mismatch betw. def. of bounding box in schema and test files
Issue -
State: closed - Opened by cannin about 14 years ago
- 3 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#18 - Recommend a mime type
Issue -
State: open - Opened by cannin about 14 years ago
- 1 comment
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#17 - Complex Glyphs depicting elements on the inside
Issue -
State: closed - Opened by cannin about 14 years ago
- 3 comments
Labels: sourceforge, auto-migrated, Milestone 1
#16 - Bug in compartments.xml or how to do associations
Issue -
State: closed - Opened by cannin about 14 years ago
- 5 comments
Labels: Markup Language, sourceforge, auto-migrated
#15 - Proposal for Label bounds
Issue -
State: closed - Opened by cannin about 14 years ago
- 4 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#14 - Second notation for state variables
Issue -
State: closed - Opened by cannin about 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#13 - Implement submaps
Issue -
State: open - Opened by cannin about 14 years ago
- 10 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#12 - Port position information duplicated
Issue -
State: closed - Opened by cannin over 14 years ago
- 4 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 2
#11 - Submap is missing
Issue -
State: closed - Opened by cannin over 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#10 - All logical operators are missing
Issue -
State: closed - Opened by cannin over 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#9 - State variables: 3rd notation not supported
Issue -
State: open - Opened by cannin over 14 years ago
- 4 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#8 - Underdefined glyphs
Issue -
State: open - Opened by cannin over 14 years ago
- 2 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3
#7 - Discussion xsd Process Description
Issue -
State: closed - Opened by cannin over 14 years ago
- 3 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#6 - The value "perturbating agent" should be "perturbing agent".
Issue -
State: closed - Opened by cannin over 14 years ago
- 3 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#5 - Missing glyphs for Process Description
Issue -
State: closed - Opened by cannin over 14 years ago
- 3 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#4 - Explicit bounding box for (some/all?) labels
Issue -
State: closed - Opened by cannin over 14 years ago
- 5 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#3 - Label of clone marker
Issue -
State: closed - Opened by cannin over 14 years ago
- 5 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#2 - Curved arcs
Issue -
State: closed - Opened by cannin over 14 years ago
- 9 comments
Labels: Markup Language, sourceforge, auto-migrated, Milestone 1
#1 - Size of clone marker
Issue -
State: open - Opened by cannin over 14 years ago
- 1 comment
Labels: Markup Language, sourceforge, auto-migrated, Milestone 3