Ecosyste.ms: Issues

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GitHub / sbg/Mitty issues and pull requests

#16 - Is there a new version available?

Issue - State: closed - Opened by allyssonallan 11 months ago

#15 - GodAligner "IndexError: list index out of range"

Issue - State: closed - Opened by AdrienOliva almost 4 years ago - 1 comment

#14 - 1kg-pcr-free.pkl read model

Issue - State: closed - Opened by yassineS about 4 years ago - 2 comments

#12 - Does Mitty support Windows 10?

Issue - State: closed - Opened by mrpk123 over 5 years ago - 2 comments

#11 - BQ of generated reads do not match model specification

Issue - State: open - Opened by cntrier over 5 years ago - 4 comments
Labels: bug

#10 - Excluding regions with masked reference sequence when simulating reads

Issue - State: open - Opened by ivargr almost 6 years ago - 4 comments

#9 - Alt none check

Pull Request - State: open - Opened by ozemsbg about 6 years ago

#8 - Overlappig deletion check for sample-genome and unit test

Pull Request - State: open - Opened by ozemsbg about 6 years ago

#7 - infra: Set up a CI to run tests on commits and PRs

Issue - State: open - Opened by ghost about 6 years ago

#6 - Add random GT to a given vcf

Pull Request - State: closed - Opened by ozemsbg about 6 years ago - 3 comments

#5 - Issue with reads when template length is shorter than read length

Issue - State: open - Opened by lhomas over 6 years ago - 4 comments
Labels: enhancement

#4 - variant-bearing-reads should have command line option for inclusion criterion

Issue - State: closed - Opened by ghost almost 8 years ago
Labels: enhancement

#3 - variant-bearing-reads.py should filter by actual variant conent, not CIGAR

Issue - State: closed - Opened by ghost almost 8 years ago
Labels: enhancement

#2 - ImportError: No module named 'mitty.benchmarking'

Issue - State: closed - Opened by yassineS almost 8 years ago - 2 comments

#1 - Unusable variants present in VCF

Issue - State: closed - Opened by yassineS almost 8 years ago - 3 comments