Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / sappelhoff/pyprep issues and pull requests
#148 - Fixes for Numpy 2
Pull Request -
State: open - Opened by sappelhoff 13 days ago
- 2 comments
#147 - CI: Fixes needed for Numpy 2.0
Issue -
State: open - Opened by sappelhoff 13 days ago
#146 - add channels in raw.info['bads'] to unusable channels in Reference class
Issue -
State: open - Opened by john-veillette 30 days ago
- 2 comments
#145 - Add bad_by_PSD()
Pull Request -
State: open - Opened by nabilalibou 3 months ago
- 1 comment
#144 - ADD flat_threshold argument in find_bad_by_nan_flat method from NoisyChannels
Pull Request -
State: closed - Opened by nabilalibou 5 months ago
- 6 comments
#143 - Add to NoisyChannel a bad_by_psd method to tackle low-frequency artefacts
Issue -
State: open - Opened by nabilalibou 5 months ago
- 8 comments
#142 - Possible to add an argument in find_bad_by_nan_flat() to change FLAT_THRESHOLD ?
Issue -
State: closed - Opened by nabilalibou 5 months ago
- 2 comments
Labels: enhancement
#141 - Bump actions/cache from 3 to 4
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
- 1 comment
Labels: dependencies, github_actions
#140 - Bump codecov/codecov-action from 3 to 4
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies, github_actions
#139 - Bump actions/upload-artifact from 3 to 4
Pull Request -
State: open - Opened by dependabot[bot] 6 months ago
- 1 comment
Labels: dependencies, github_actions
#138 - Bump actions/setup-python from 4 to 5
Pull Request -
State: closed - Opened by dependabot[bot] 6 months ago
- 1 comment
Labels: dependencies, github_actions
#137 - DOC: clarify ref_chs vs reref_chs
Pull Request -
State: closed - Opened by sappelhoff 8 months ago
- 1 comment
#136 - New release?
Issue -
State: closed - Opened by hoechenberger 8 months ago
- 4 comments
#135 - How to include the prep output in my preprocessing pipeline?
Issue -
State: closed - Opened by m4sp3 9 months ago
- 1 comment
#134 - Bump actions/checkout from 3 to 4
Pull Request -
State: closed - Opened by dependabot[bot] 9 months ago
- 1 comment
Labels: dependencies, github_actions
#133 - [Feature suggestion] Allow for relevant annotation selection during processing.
Issue -
State: open - Opened by Gvanderl 11 months ago
#132 - maint: bump versions
Pull Request -
State: closed - Opened by sappelhoff about 1 year ago
#131 - Documentation for Noisy Channels Algorithms' stand-alone use
Issue -
State: open - Opened by yjmantilla over 1 year ago
- 1 comment
Labels: documentation/example
#130 - Add check for channel positions
Pull Request -
State: closed - Opened by sappelhoff over 1 year ago
#129 - find_all_bads throws inf/nan error after filtering/detrending?
Issue -
State: closed - Opened by sunshineinsandiego over 1 year ago
- 12 comments
#128 - use get_data instead of ._data
Pull Request -
State: closed - Opened by sappelhoff over 1 year ago
- 4 comments
#127 - Issue with RawBrainVision
Issue -
State: closed - Opened by Sam54000 over 1 year ago
- 2 comments
#126 - Question: using pyprep.NoisyChannels on numpy arrays
Issue -
State: closed - Opened by sunshineinsandiego over 1 year ago
- 1 comment
#125 - Computation of window size based on cutoff frequency in local detrend method
Issue -
State: open - Opened by danibene over 1 year ago
- 1 comment
Labels: Matlab PREP
#124 - update issue/pr templates
Issue -
State: closed - Opened by sappelhoff almost 2 years ago
- 1 comment
#123 - migrate from `.zenodo.json` to `CITATION.cff`
Issue -
State: closed - Opened by sappelhoff almost 2 years ago
- 1 comment
#122 - Bump actions/setup-python from 2 to 4
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#121 - Bump codecov/codecov-action from 2 to 3
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#120 - Bump actions/checkout from 2 to 3
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#119 - Bump actions/upload-artifact from 2 to 3
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#118 - Bump actions/cache from 2 to 3
Pull Request -
State: closed - Opened by dependabot[bot] almost 2 years ago
- 1 comment
Labels: dependencies
#117 - convert chn labels from list to array
Pull Request -
State: closed - Opened by OleBialas almost 2 years ago
- 5 comments
#116 - List of channel names causes TypeError in find_bad_by_ransac
Issue -
State: closed - Opened by OleBialas almost 2 years ago
- 2 comments
Labels: bug
#115 - ensure raw is loaded when pyprep is used
Pull Request -
State: closed - Opened by sappelhoff about 2 years ago
#114 - MNE-Python 1.0 fixes
Pull Request -
State: closed - Opened by sappelhoff over 2 years ago
- 2 comments
#113 - Saving prep.raw give error " ValueError: Measurement infos are inconsistent for dig"
Issue -
State: closed - Opened by walkerped over 2 years ago
- 4 comments
#112 - MRG: Add mne logger
Pull Request -
State: closed - Opened by mscheltienne over 2 years ago
- 5 comments
#111 - Passing a custom montage to the PrepPipeline(raw, montage=?)?
Issue -
State: closed - Opened by neerajww over 2 years ago
- 5 comments
#110 - Improve documentation for PyPREP/MatPREP highpass differences
Pull Request -
State: closed - Opened by a-hurst over 2 years ago
- 6 comments
#109 - pyprep.utils._filter_design throws error for large sampling rates
Issue -
State: open - Opened by john-veillette over 2 years ago
- 4 comments
Labels: bug
#108 - Add a "reject_by_annotation" parameter for finding bad channels
Issue -
State: open - Opened by sappelhoff over 2 years ago
- 1 comment
Labels: enhancement
#107 - filt vs filtfilt (MATLAB implementation)
Issue -
State: closed - Opened by sappelhoff over 2 years ago
#106 - Make pyprep load MNE raw data for object, if not already loaded
Issue -
State: closed - Opened by SebastianSpeer over 2 years ago
- 3 comments
#105 - Use the MNE logger to set the verbosity
Issue -
State: closed - Opened by mscheltienne over 2 years ago
- 6 comments
#104 - add flake8 to pre.commit-config
Pull Request -
State: closed - Opened by joDancker almost 3 years ago
- 2 comments
#103 - Adding flake8 to pre-commit-config
Issue -
State: closed - Opened by joDancker almost 3 years ago
#102 - Always keep EEG data in Volts instead of converting to mV
Pull Request -
State: closed - Opened by a-hurst almost 3 years ago
- 2 comments
#101 - Release 0.4
Issue -
State: closed - Opened by sappelhoff almost 3 years ago
- 4 comments
#100 - Strange PyPrep/Ransac outputs
Issue -
State: closed - Opened by golnousha almost 3 years ago
- 1 comment
#99 - [WIP] Split PrepPipeline into separate methods, make final interpolation optional
Pull Request -
State: open - Opened by a-hurst almost 3 years ago
- 8 comments
#98 - Real-world benchmarking for (Py)PREP
Issue -
State: open - Opened by a-hurst about 3 years ago
Labels: enhancement
#97 - Bad-by-dropout channels sometimes ignored during Reference
Issue -
State: open - Opened by a-hurst about 3 years ago
#96 - Implement EEGLAB-style interpolation in Reference for matlab_strict
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 6 comments
#95 - Improved API for PREP configuration
Issue -
State: open - Opened by a-hurst about 3 years ago
- 6 comments
Labels: API, refactor
#94 - Weird handling of initial bad-by-SNR channels during robust referencing
Issue -
State: open - Opened by a-hurst about 3 years ago
- 1 comment
#93 - Make noisy channel exclusion during Reference compatible with MATLAB PREP
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 6 comments
#92 - Ensure all reference channels are used during final average referencing
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#91 - PyPREP interpolates more channels than MATLAB PREP during re-referencing
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#90 - PyPREP excludes interpolated NaN/flat/low-SNR channels from average referencing
Issue -
State: closed - Opened by a-hurst about 3 years ago
Labels: bug
#89 - Use identical RNG state across RANSAC runs when matlab_strict enabled
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#88 - Refactor & improved documentation of NoisyChannels
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#87 - fill up .zenodo.json before Release
Issue -
State: closed - Opened by sappelhoff about 3 years ago
- 11 comments
Labels: documentation/example
#86 - Fix large performance regression in _mat_quantile
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#85 - CI: enforce black style
Pull Request -
State: closed - Opened by sappelhoff about 3 years ago
- 3 comments
#84 - Refactor of NoisyChannels tests and split into separate methods
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#83 - PREP can't always flag low amplitude channels as bad-by-deviation
Issue -
State: open - Opened by a-hurst about 3 years ago
- 4 comments
#82 - Adaptive line noise removal differs between PyPREP and Matlab PREP
Issue -
State: open - Opened by a-hurst about 3 years ago
- 6 comments
Labels: MNE-Python
#81 - Fix handling of channels with dropouts (intermittent flat regions) within NoisyChannels
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#80 - Dropout channel detection broken in PyPREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#79 - Add initial tests for removeTrend & NoisyChannels
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 5 comments
#78 - Change initial re-referencing state in Reference to match Matlab PREP
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#77 - Interpolation of bad channels differs numerically between PyPREP and MatPREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 10 comments
#76 - PyPREP starts re-referencing with more 'bad' channels than Matlab PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#75 - First-pass average referencing differs between PyPREP and Matlab PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#74 - RANSAC random seeds work differently in PyPREP than in MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 8 comments
#73 - Extend PrepPipeline to allow performing PREP in stages
Issue -
State: open - Opened by a-hurst about 3 years ago
- 11 comments
#72 - Skip RANSAC predictions for channels already confirmed as bad
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 1 comment
#71 - Make removeTrend output identical to MATLAB PREP
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 10 comments
#70 - Add matlab_strict API for matching MATLAB PREP's correlations and medians during RANSAC
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 7 comments
#69 - RANSAC docstring improvements & related cleanup
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#68 - Retain detailed info about calculations during NoisyChannels
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 1 comment
#67 - Fix RANSAC-breaking bug in RANSAC correlation window chunking code
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#66 - Add window-wise RANSAC to reduce RAM requirements
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 17 comments
#65 - RANSAC correlations (and logic) differ between PyPREP and MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 16 comments
#64 - Retain HF noise channels during RANSAC when not bad by any other metric
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
#63 - PyPREP excludes more channels from RANSAC than MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 4 comments
#62 - Make PyPREP's random channel picks match MATLAB PREP's for the same random seeds
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#61 - RANSAC channel picks differ between MATLAB PREP and PyPREP using the same seed
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 7 comments
#60 - Changed bad-by-flat threshold to match MATLAB PREP
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 2 comments
#59 - "Bad by flat" threshold differs between PyPREP and Matlab PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 1 comment
#58 - Numeric equivalence with MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 12 comments
#57 - Add MATLAB-style implementations of the quantile and IQR functions
Pull Request -
State: closed - Opened by a-hurst about 3 years ago
- 4 comments
#56 - Bad channels by correlation differ between PyPREP and MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 3 comments
#55 - removeTrend produces different values in PyPREP than MATLAB PREP
Issue -
State: closed - Opened by a-hurst about 3 years ago
- 10 comments
#54 - Minimum of three NoisyChannels iterations?
Issue -
State: open - Opened by a-hurst over 3 years ago
- 2 comments
Labels: Matlab PREP
#53 - Ransac Comparison Example
Pull Request -
State: open - Opened by yjmantilla over 3 years ago
- 16 comments
Labels: documentation/example
#52 - "Undefined label" warning using intersphinx and numpydoc
Issue -
State: closed - Opened by sappelhoff over 3 years ago
- 8 comments
#51 - Functional ransac
Pull Request -
State: closed - Opened by yjmantilla over 3 years ago
- 9 comments
#50 - use MNE public API for interpolation
Issue -
State: closed - Opened by sappelhoff over 3 years ago
- 18 comments
#49 - Testing Matlab PREP in our CI? Directly comparing with pyprep
Issue -
State: closed - Opened by sappelhoff over 3 years ago
- 26 comments