Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / saezlab/visium_heart issues and pull requests

#19 - reproduce deconvolution spatial trascriptomics

Issue - State: open - Opened by bio-la 3 months ago - 6 comments

#18 - batch lables missing for snRNA-seq integration

Issue - State: closed - Opened by lengfei5 11 months ago - 2 comments

#17 - Rscript (trajectory_ArchR.R) in trajectory analysis

Issue - State: open - Opened by xixiYan722 about 1 year ago

#16 - typos in !is.na(si)

Issue - State: open - Opened by howtofindme over 1 year ago

#15 - incomplete contents in your convert_rds_to_h5ad_visium.ipynb file

Issue - State: open - Opened by howtofindme over 1 year ago - 2 comments

#14 - Where is get_cell_states.R file?

Issue - State: closed - Opened by Fanzwstatis over 1 year ago - 2 comments

#13 - Would you mind releasing scripts related to match ATAC and RNA?

Issue - State: closed - Opened by frucelee over 1 year ago - 2 comments

#12 - Where is ArchRProject files?

Issue - State: open - Opened by wanglu2014 over 1 year ago

#11 - Celltypes for deconvoluion

Issue - State: closed - Opened by wangzlgithub almost 2 years ago - 1 comment

#10 - null for rownames(proj)

Issue - State: open - Opened by ellyhung almost 2 years ago - 6 comments

#9 - Cell type clustering

Issue - State: closed - Opened by Kai6662 over 2 years ago - 2 comments

#8 - About the file annotation.rds in get_states_dea.R

Issue - State: closed - Opened by jianlion over 2 years ago - 2 comments

#6 - Would you mind releasing scripts related to cell cycle score?

Issue - State: closed - Opened by wangyiqing50 over 2 years ago - 1 comment

#5 - Added snRNA_seq analysis of visium data

Pull Request - State: open - Opened by KramannLab about 4 years ago

#4 - Added snRNA_seq analysis of visium data

Pull Request - State: closed - Opened by KramannLab about 4 years ago

#3 - add atac-seq footprinting analysis

Pull Request - State: closed - Opened by lzj1769 over 4 years ago

#2 - add more scripts

Pull Request - State: closed - Opened by lzj1769 over 4 years ago

#1 - add trajectory analysis

Pull Request - State: closed - Opened by lzj1769 over 4 years ago