Ecosyste.ms: Issues

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GitHub / rvlenth/emmeans issues and pull requests

#507 - invert OR option

Issue - State: open - Opened by consultfiv 26 days ago - 4 comments
Labels: enhancement, wontfix

#506 - Transformations for covariates

Issue - State: open - Opened by wdkrnls 28 days ago - 9 comments
Labels: question

#505 - Unexpected result when using emmeans on coxph object

Issue - State: closed - Opened by lang-benjamin 2 months ago - 5 comments
Labels: bug

#504 - Log transform is not detected when applying emmeans to a list of models

Issue - State: closed - Opened by qdread 2 months ago - 6 comments
Labels: bug

#503 - Bug with nuisance factors in multivariate models

Issue - State: closed - Opened by rvlenth 3 months ago - 1 comment
Labels: bug

#502 - Adding the following function for pooling ready emmeans objects to the emmeans package

Issue - State: closed - Opened by Generalized 3 months ago - 1 comment
Labels: question

#500 - Inconsistency when `emmeans()` is used along with `fct_na_value_to_level()`

Issue - State: closed - Opened by anna-doizy 3 months ago - 5 comments
Labels: bug

#499 - How to pass own degrees of freedom under multiple imputation?

Issue - State: closed - Opened by Generalized 3 months ago - 3 comments
Labels: question

#497 - Building from github fails on Windows

Issue - State: closed - Opened by Generalized 3 months ago - 3 comments
Labels: bug

#496 - Degrees of freedom with Gaussian model fit via geepack and glmtoolbox

Issue - State: closed - Opened by Generalized 3 months ago - 5 comments
Labels: question

#493 - Github action workflow for pkgdown deployment

Pull Request - State: closed - Opened by jpiaskowski 4 months ago

#492 - GHA workflow for pkgdown

Pull Request - State: closed - Opened by jpiaskowski 4 months ago

#491 - add gha for pkgdown build

Pull Request - State: closed - Opened by jpiaskowski 4 months ago - 3 comments

#490 - MVT-adjusted estimates "jump" even after assigned to a variable

Issue - State: closed - Opened by adrianolszewski 5 months ago - 3 comments
Labels: question

#489 - Bump minimum needed R version to 4.3

Issue - State: closed - Opened by IndrajeetPatil 5 months ago - 5 comments
Labels: bug

#488 - Update re-engineering-clds.rmd

Pull Request - State: closed - Opened by retodomax 5 months ago - 1 comment

#487 - Lost trend (ordered factor) when using qdrg in the multiple imputation context.

Issue - State: closed - Opened by Generalized 5 months ago - 1 comment
Labels: question

#486 - emmeans seems to be losing the information about trend in multiple imputation setting

Issue - State: closed - Opened by Generalized 5 months ago - 1 comment
Labels: question

#485 - Feature request

Issue - State: closed - Opened by jpiaskowski 5 months ago - 15 comments

#484 - Update transformations.Rmd

Pull Request - State: closed - Opened by retodomax 5 months ago - 1 comment

#483 - Statistical test used to calculate p-values for Poisson regression

Issue - State: closed - Opened by gevro 5 months ago - 5 comments
Labels: question

#480 - as.data.frame collapses groups and recalculates values

Issue - State: closed - Opened by gevro 5 months ago - 19 comments
Labels: question

#479 - Change `exclude` in .update.options()

Pull Request - State: closed - Opened by banfai 6 months ago - 1 comment

#478 - Passing `exclude` argument of emmc functions in `emmeans` clashes with .update.options

Issue - State: closed - Opened by banfai 6 months ago - 1 comment
Labels: bug

#477 - emmeans() for {ordbetareg} models only reports output on the log odds scale

Issue - State: closed - Opened by mz555 6 months ago - 6 comments

#476 - standardization of slopes

Issue - State: closed - Opened by samyogita-hardikar 6 months ago - 2 comments
Labels: question

#475 - are emtrends adjusted for covariates in the model?

Issue - State: closed - Opened by karan-ganguly 6 months ago - 8 comments
Labels: question

#473 - Emmeans no longer recognizes stratified factors in Survival

Issue - State: closed - Opened by mdjpe 6 months ago - 9 comments
Labels: bug, question

#472 - How to display p-values adjusted across multiple groups of comparisons with pwpp()?

Issue - State: closed - Opened by qdread 6 months ago - 7 comments
Labels: question

#471 - Comparing each group slope to the slope of all other observations w/ del.eff

Issue - State: closed - Opened by walrossker 6 months ago - 9 comments
Labels: question

#470 - how to compute contrasts between groups?

Issue - State: closed - Opened by saotts 7 months ago - 3 comments
Labels: question

#469 - Comparing each level to a weighted mean of all other levels

Issue - State: closed - Opened by walrossker 7 months ago - 5 comments
Labels: question

#468 - Emmeans package fails to load

Issue - State: closed - Opened by munizdiezclara 7 months ago - 3 comments
Labels: question

#467 - adjustment method for contrast(combine = TRUE)

Issue - State: closed - Opened by gevro 8 months ago - 1 comment
Labels: question

#466 - Adjusting p value across models

Issue - State: closed - Opened by gevro 8 months ago - 2 comments
Labels: question

#465 - Using lsmeans() with gls() object closes R gui when using mode = "satterthwaite"

Issue - State: closed - Opened by jdbible 8 months ago - 10 comments
Labels: bug

#464 - fix partial argument match: just -> justify

Pull Request - State: closed - Opened by pawelru 9 months ago - 1 comment

#463 - Partial argument patch of `just` to `justify`

Issue - State: closed - Opened by pawelru 9 months ago - 3 comments

#462 - Combining 'make.tran' transformations?

Issue - State: closed - Opened by a-hurst 9 months ago - 4 comments
Labels: question

#460 - emmeans over geepack::geeglm accepts "vcov" but glmtoolbox::glmgee does not

Issue - State: closed - Opened by Generalized 9 months ago - 6 comments
Labels: bug

#459 - Understanding the effect's direction through the "eff_size" function

Issue - State: closed - Opened by JulianGaviriaL 10 months ago - 7 comments
Labels: question

#458 - better support for quantile regression?

Issue - State: closed - Opened by yuryzablotski 10 months ago - 32 comments
Labels: question

#457 - New error when estimating emmeans with mode mean.class from clmm fit

Issue - State: closed - Opened by qdread 11 months ago - 5 comments
Labels: bug

#456 - Error in t(OO[[rr]]) : object 'unpackedMatrix_transpose' not found

Issue - State: closed - Opened by Florentin85 11 months ago - 9 comments
Labels: question

#455 - Error with model-averaged binomial GLMM (with glmmTMB): subscript out of bounds

Issue - State: closed - Opened by MarcRieraDominguez 11 months ago - 2 comments
Labels: bug

#454 - Considerations on adding a more complete support for GEE thrugh the glmtoolbox::glmgee()

Issue - State: closed - Opened by Generalized 11 months ago - 4 comments
Labels: question

#453 - emmeans gives too high SEs for lme model

Issue - State: closed - Opened by certara-mtomashevskiy 11 months ago - 5 comments

#452 - Pairwise comparisons for a continuous x continuous interaction produce identical t- and p-values

Issue - State: closed - Opened by Tsode 11 months ago - 2 comments
Labels: question

#451 - Inquiry about Mathematical Proof for "cells"-weighted EMMs equal to Marginal Means

Issue - State: closed - Opened by cuhuajialiang 11 months ago - 8 comments
Labels: question

#450 - unadjusted p-value for pairwise emtrends contrasts

Issue - State: closed - Opened by samyogita-hardikar 11 months ago - 2 comments
Labels: question

#449 - Error with model-averaged objects with poly() in the model formula

Issue - State: closed - Opened by MarcRieraDominguez 12 months ago - 4 comments
Labels: bug

#448 - emtrends odd behavior with nuisance variables

Issue - State: closed - Opened by jnugentkp 12 months ago - 6 comments
Labels: bug

#447 - How does/should rbind interact with dunnettx adjustment?

Issue - State: closed - Opened by qdread about 1 year ago - 4 comments
Labels: question

#446 - qdrg with MICE (as.mira) - is there any way to marry them?

Issue - State: closed - Opened by Generalized about 1 year ago - 4 comments
Labels: question

#444 - emmeans with multgee - discussion of the result

Issue - State: closed - Opened by Generalized about 1 year ago - 1 comment
Labels: question

#443 - Is there a way to incorporate sampling weights when using emmeans

Issue - State: closed - Opened by lydiazhangnyspi about 1 year ago - 3 comments
Labels: question

#442 - Error with model-averaged hurdle models fitted through pscl

Issue - State: closed - Opened by MarcRieraDominguez about 1 year ago - 6 comments
Labels: bug

#441 - [Feature request] support for fixest models

Issue - State: closed - Opened by albertostefanelli about 1 year ago - 13 comments

#440 - Hurdle models in pscl package: how to get truncated counts and binomial probabilities?

Issue - State: closed - Opened by MarcRieraDominguez about 1 year ago - 2 comments
Labels: question

#439 - Is there support for `nnet::multinom` when the LHS of the formula is a matrix of counts?

Issue - State: closed - Opened by TylerSagendorf about 1 year ago - 5 comments
Labels: question

#438 - joint_tests omits covariate transformed with asin(sqrt()) via make.tran()

Issue - State: closed - Opened by hnguyen19 about 1 year ago - 8 comments
Labels: question

#437 - Update of the list of supported models (mmrm)

Issue - State: closed - Opened by Generalized about 1 year ago - 3 comments
Labels: question

#435 - Feature request: joint_tests to recognize asin.sqrt transformation via make.tran()

Issue - State: closed - Opened by hnguyen19 about 1 year ago - 5 comments
Labels: question

#434 - math formatting in messy data vignette

Pull Request - State: closed - Opened by bbolker about 1 year ago - 3 comments

#433 - Add Pull Request Template

Issue - State: closed - Opened by SaarthakMaini about 1 year ago - 1 comment
Labels: enhancement

#432 - Cannot produce estimates from GLM fit with brms when quadratic term is included in predictors

Issue - State: closed - Opened by qdread about 1 year ago - 4 comments
Labels: bug

#431 - How to reproduce behavior of adjdfe=source in SAS lsmeans or slice statement

Issue - State: closed - Opened by qdread about 1 year ago - 6 comments
Labels: question

#430 - emmeans gives wrong results for `afex_aov`s if the `at = ` argument is reversed

Issue - State: closed - Opened by Joao-O-Santos about 1 year ago - 4 comments
Labels: bug

#428 - Issue with specifying power transformation

Issue - State: closed - Opened by lainem11 over 1 year ago - 2 comments
Labels: bug

#427 - Parallelization of emmeans() for gls models is not supported

Issue - State: closed - Opened by FehrAaron over 1 year ago - 3 comments
Labels: bug

#426 - Why is `eff_size` output different than a paired samples cohen's d?

Issue - State: closed - Opened by walrossker over 1 year ago - 6 comments
Labels: question

#425 - Optional configurable delimiter in the column means of as.mcmc() output

Issue - State: closed - Opened by wlandau over 1 year ago - 7 comments
Labels: question

#424 - The long, sad saga of offset handling in emmeans

Issue - State: closed - Opened by rvlenth over 1 year ago - 1 comment

#423 - emtrends in a model with two interacting categorical predictors and one (or more) numeric

Issue - State: closed - Opened by samyogita-hardikar over 1 year ago - 2 comments
Labels: question

#422 - Metafor rma.mv() degree of freedom question

Issue - State: closed - Opened by mahonmb over 1 year ago - 4 comments
Labels: question

#421 - pwpp x-axis adjustment: help needed

Issue - State: closed - Opened by davidsimondavis over 1 year ago - 5 comments
Labels: question

#420 - Regridding outcome of interrupted time series

Issue - State: closed - Opened by jrahilly14 over 1 year ago - 2 comments
Labels: question

#419 - pwpp and "within-subject confidence intervals"

Issue - State: closed - Opened by dhalpern over 1 year ago - 1 comment
Labels: question

#418 - Error in UseMethod("cld") : no applicable method for 'cld' applied to an object of class "emmGrid"

Issue - State: closed - Opened by Easonchen12 over 1 year ago - 4 comments
Labels: question

#417 - Problematic output using the contrast() and pairs() functions

Issue - State: closed - Opened by camillesouama over 1 year ago - 6 comments

#416 - Data imputation (MICE) and joint_tests() - does it use D1, D2 or D3?

Issue - State: closed - Opened by Generalized over 1 year ago - 1 comment
Labels: question

#415 - Adding (new) interaction using emmeans

Issue - State: closed - Opened by Dallak over 1 year ago - 2 comments
Labels: question

#414 - hyperlink

Pull Request - State: closed - Opened by wibeasley over 1 year ago - 1 comment

#413 - emtrends() fails with class "averaging": unable to find the data

Issue - State: closed - Opened by MarcRieraDominguez over 1 year ago - 3 comments
Labels: bug

#412 - singular/plural

Pull Request - State: closed - Opened by wibeasley over 1 year ago - 1 comment

#411 - package ‘emmeans’ is not available (for R version 3.6.2)

Issue - State: closed - Opened by ShenTTT over 1 year ago - 1 comment
Labels: question

#410 - mvcontrast returns list, not emm_list

Issue - State: closed - Opened by WillemSleegers over 1 year ago - 4 comments
Labels: question

#409 - emmeans is giving oposite results for averaging than for each of the 8 models

Issue - State: closed - Opened by derek-corcoran-barrios over 1 year ago - 11 comments
Labels: bug, question

#408 - Erroneous labelling of output of emmeans() when levels() is used in workflow

Issue - State: closed - Opened by Dr-Robert-Mason over 1 year ago - 6 comments
Labels: question