Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / rs-station/reciprocalspaceship issues and pull requests
#287 - Pandas Deprecation Warnings
Issue -
State: open - Opened by kmdalton 2 months ago
#286 - add hkls attribute rs.DataSet
Pull Request -
State: closed - Opened by kmdalton 2 months ago
- 2 comments
#285 - Deprecated `DataSet.to_reciprocalgrid()` should call `DataSet.to_reciprocal_grid()`
Pull Request -
State: closed - Opened by JBGreisman 3 months ago
- 1 comment
Labels: API
#284 - chore(deps): update dependency gemmi to >=0.5.5, <=0.7.0
Pull Request -
State: open - Opened by renovate[bot] 3 months ago
- 8 comments
Labels: version
#283 - Add cifdump CLI utility
Pull Request -
State: closed - Opened by jrobsontull 3 months ago
- 4 comments
#282 - Proposal: `Map` object
Issue -
State: open - Opened by tjlane 3 months ago
- 3 comments
Labels: wishlist
#281 - Update codecov/codecov-action action to v5
Pull Request -
State: closed - Opened by renovate[bot] 3 months ago
Labels: version
#280 - add python 3.13 to build workflow
Pull Request -
State: open - Opened by kmdalton 3 months ago
- 2 comments
#279 - Fix is_isomorphous
Pull Request -
State: closed - Opened by kmdalton 4 months ago
- 4 comments
#278 - codecov is broken
Issue -
State: closed - Opened by kmdalton 4 months ago
- 1 comment
Labels: bug
#277 - bug in `is_isomorphous` cell comparison
Issue -
State: closed - Opened by tjlane 4 months ago
- 3 comments
Labels: bug
#276 - pyproject.toml
Pull Request -
State: closed - Opened by tjlane 4 months ago
- 2 comments
#275 - Documentation Build Failing
Issue -
State: closed - Opened by kmdalton 4 months ago
- 2 comments
#274 - bump version
Pull Request -
State: closed - Opened by kmdalton 4 months ago
#273 - add python 3.12 support
Pull Request -
State: closed - Opened by kmdalton 4 months ago
- 2 comments
Labels: bug
#272 - `pkg_resources` no longer in `python3.12+`
Issue -
State: closed - Opened by tjlane 4 months ago
- 2 comments
#271 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 4 months ago
#270 - Update dependency pandas to >=2.2.2, <=2.2.3
Pull Request -
State: closed - Opened by renovate[bot] 5 months ago
Labels: version
#269 - Update dependency gemmi to >=0.5.5, <=0.6.7
Pull Request -
State: closed - Opened by renovate[bot] 5 months ago
Labels: version
#268 - Add description of columns returned by `rs.read_crystfel()`
Pull Request -
State: closed - Opened by JBGreisman 6 months ago
Labels: documentation
#267 - Refactor Ray contextmanager
Issue -
State: open - Opened by kmdalton 6 months ago
#266 - Update `rs.DataSet.reset_index()` call signature to matches `pandas >v1.5`
Pull Request -
State: closed - Opened by JBGreisman 6 months ago
- 2 comments
Labels: bug, API, version
#265 - Add support for range indexed data in `DataSet.write_mtz()` and `DataSet.to_gemmi()`
Pull Request -
State: closed - Opened by JBGreisman 6 months ago
- 1 comment
Labels: bug
#264 - adds script to import cctbx data to rs
Pull Request -
State: closed - Opened by dermen 6 months ago
- 21 comments
#263 - Bump version to 1.0.2 to prepare for release
Pull Request -
State: closed - Opened by JBGreisman 7 months ago
Labels: version
#262 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 7 months ago
#261 - Restore Numpy v1 Support
Pull Request -
State: closed - Opened by kmdalton 8 months ago
#260 - Parallel Stream File Parsing with ray.io
Pull Request -
State: closed - Opened by kmdalton 8 months ago
- 9 comments
Labels: performance
#259 - Is numeric na
Pull Request -
State: closed - Opened by kmdalton 8 months ago
- 2 comments
#258 - enable numpy 2.0 support
Pull Request -
State: closed - Opened by kmdalton 8 months ago
#257 - add manual trigger for build
Pull Request -
State: closed - Opened by kmdalton 8 months ago
- 2 comments
#256 - set maximum numpy version to <2.0
Pull Request -
State: closed - Opened by kmdalton 8 months ago
- 2 comments
#255 - RS requires set_index(["H","K","L"]) to create a multi_index using rs.DataSet
Issue -
State: closed - Opened by DHekstra 9 months ago
- 5 comments
Labels: bug
#254 - Failure to correctly read Miller indices from cctbx-generated MTZ
Issue -
State: closed - Opened by DHekstra 9 months ago
- 8 comments
#253 - Update dependency gemmi to >=0.5.5, <=0.6.6
Pull Request -
State: closed - Opened by renovate[bot] 9 months ago
Labels: version
#252 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 10 months ago
#251 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 10 months ago
#250 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 11 months ago
#249 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 11 months ago
#248 - write_mtz SettingWithCopyWarning
Issue -
State: closed - Opened by DHekstra 11 months ago
- 2 comments
#247 - support **kwargs in gemmification decoratored fn
Pull Request -
State: closed - Opened by kmdalton 11 months ago
Labels: bug
#246 - Use einsum in weighted_pearsonr
Pull Request -
State: closed - Opened by kmdalton 12 months ago
Labels: enhancement, performance
#245 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] 12 months ago
#244 - Update dependency gemmi to >=0.5.5, <=0.6.5
Pull Request -
State: closed - Opened by renovate[bot] about 1 year ago
Labels: version
#243 - Update codecov/codecov-action action to v4
Pull Request -
State: closed - Opened by renovate[bot] about 1 year ago
Labels: version
#242 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
- 1 comment
#241 - Update dependency pandas to support pandas v2.2.2
Pull Request -
State: closed - Opened by renovate[bot] about 1 year ago
- 2 comments
Labels: version
#240 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
- 1 comment
#239 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
- 1 comment
#238 - mean_intensity_by_miller_index should use a grid
Issue -
State: open - Opened by kmdalton about 1 year ago
- 1 comment
#237 - Support clipping Sigma to avoid negative values in French-Wilson method
Pull Request -
State: closed - Opened by DHekstra about 1 year ago
- 10 comments
Labels: API, enhancement
#236 - Update dependency gemmi to >=0.5.5, <=0.6.4
Pull Request -
State: closed - Opened by renovate[bot] about 1 year ago
- 1 comment
Labels: version
#235 - clip I for Sigma calc
Pull Request -
State: closed - Opened by DHekstra about 1 year ago
- 3 comments
#234 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 1 year ago
#233 - Update actions/setup-python action to v5
Pull Request -
State: closed - Opened by renovate[bot] about 1 year ago
- 1 comment
Labels: version
#232 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
- 1 comment
#231 - No documentation of CrystFEL columns
Issue -
State: closed - Opened by kmdalton over 1 year ago
- 1 comment
Labels: good first issue, documentation
#230 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
- 1 comment
#229 - A `rs.cifdump` utility?
Issue -
State: closed - Opened by dennisbrookner over 1 year ago
- 2 comments
Labels: good first issue, enhancement
#228 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
#227 - Used pandas.core.ops attribute does not appear to exist
Issue -
State: open - Opened by PrinceWalnut over 1 year ago
- 3 comments
#226 - Update codecov/codecov-action action to v4 - autoclosed
Pull Request -
State: closed - Opened by renovate[bot] over 1 year ago
Labels: version
#225 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
- 1 comment
#224 - Update dependency gemmi to >=0.5.5, <=0.6.3
Pull Request -
State: closed - Opened by renovate[bot] over 1 year ago
- 1 comment
Labels: version
#223 - `rs.DataSet.reset_index()` call signature does not match pandas >1.5
Issue -
State: closed - Opened by kmdalton over 1 year ago
- 1 comment
Labels: bug, API, version
#222 - Update actions/checkout action to v4
Pull Request -
State: closed - Opened by renovate[bot] over 1 year ago
Labels: version
#221 - Update dependency pandas to >=2.0.0, <=2.1.4
Pull Request -
State: closed - Opened by renovate[bot] over 1 year ago
- 8 comments
Labels: version
#220 - Add python 3.11 to build tests
Pull Request -
State: closed - Opened by JBGreisman over 1 year ago
- 1 comment
Labels: version
#219 - Fixes #194: Update rs.utils.in_asu() docstring to clarify behavior
Pull Request -
State: closed - Opened by JBGreisman over 1 year ago
- 1 comment
Labels: documentation
#218 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 1 year ago
- 1 comment
#217 - Added .read_cif() function and test file test_cif.py
Pull Request -
State: closed - Opened by LuisA92 over 1 year ago
- 1 comment
Labels: API
#216 - Faster parser for CrystFEL stream files
Pull Request -
State: closed - Opened by kmdalton over 1 year ago
- 12 comments
Labels: performance
#215 - add_rfree() does not consider Friedel mates
Issue -
State: closed - Opened by DHekstra over 1 year ago
- 2 comments
Labels: enhancement
#214 - Update dependency gemmi to >=0.5.5, <=0.6.2
Pull Request -
State: closed - Opened by renovate[bot] over 1 year ago
- 1 comment
Labels: version
#213 - Return keys of dictionary in crystfel.py
Issue -
State: open - Opened by DHekstra almost 2 years ago
- 8 comments
#212 - Update dependency gemmi to >=0.5.5, <=0.6.1
Pull Request -
State: closed - Opened by renovate[bot] almost 2 years ago
- 1 comment
Labels: version
#211 - Update dependency pandas to v2
Pull Request -
State: closed - Opened by renovate[bot] almost 2 years ago
- 3 comments
Labels: version
#210 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] almost 2 years ago
#209 - Update dependency gemmi to >=0.5.5, <=0.6.0
Pull Request -
State: closed - Opened by renovate[bot] almost 2 years ago
Labels: version
#208 - Upgrade sphinx version by removing sphinx_panels dependency
Pull Request -
State: closed - Opened by JBGreisman almost 2 years ago
- 2 comments
Labels: documentation
#207 - Add GitHub Action for testing documentation build during pull requests
Pull Request -
State: closed - Opened by JBGreisman almost 2 years ago
- 1 comment
Labels: documentation
#206 - API reference website display
Issue -
State: closed - Opened by DHekstra about 2 years ago
Labels: documentation
#205 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] about 2 years ago
- 1 comment
#204 - unstack_anomalous makes data that phenix cannot interpret
Issue -
State: open - Opened by kmdalton about 2 years ago
- 3 comments
#203 - Update dependency jinja2 to <3.1.3
Pull Request -
State: closed - Opened by renovate[bot] about 2 years ago
- 2 comments
Labels: version
#202 - Fix documentation build by lowering jinja2 version
Pull Request -
State: closed - Opened by JBGreisman about 2 years ago
- 2 comments
Labels: bug, documentation
#201 - Update dependency gemmi to >=0.5.5, <=0.5.8
Pull Request -
State: closed - Opened by renovate[bot] about 2 years ago
- 1 comment
Labels: version
#200 - support for read_precognition() for hkl without anomalous columns
Issue -
State: closed - Opened by DHekstra about 2 years ago
- 6 comments
#199 - Update broken MIT license badge in README.md
Pull Request -
State: closed - Opened by JBGreisman about 2 years ago
- 1 comment
Labels: documentation
#198 - `hkl_to_asu` does not annotate M/ISYM field correctly
Issue -
State: closed - Opened by ziyuanzhao2000 about 2 years ago
- 2 comments
#197 - Update example interactive maps to point to rs-station
Pull Request -
State: closed - Opened by JBGreisman over 2 years ago
Labels: bug, documentation
#196 - Update all links in reciprocalspaceship for transfer to rs-station org
Pull Request -
State: closed - Opened by JBGreisman over 2 years ago
Labels: documentation
#195 - function for cif file IO and possible support for multi-dataset files
Issue -
State: closed - Opened by minhuanli over 2 years ago
- 3 comments
Labels: API, wishlist
#194 - rs.utils.asu.in_asu() does not use the 'anomalous ASU' for stacked anomalous data.
Issue -
State: closed - Opened by DHekstra over 2 years ago
- 1 comment
Labels: documentation
#193 - Unstack anomalous taking into account Careless repeats
Issue -
State: closed - Opened by DHekstra over 2 years ago
- 10 comments
#192 - `stack_anomalous` inside `groupby` breaks `as_index=False`
Issue -
State: open - Opened by kmdalton over 2 years ago
- 1 comment
#191 - groupby apply drops cell and spacegroup
Issue -
State: open - Opened by kmdalton over 2 years ago
- 2 comments
Labels: bug
#190 - Cannot unstack_anomalous with other columns in index
Issue -
State: open - Opened by kmdalton over 2 years ago
#189 - add `rs.utils.weighted_pearsonr` and tests
Pull Request -
State: closed - Opened by kmdalton over 2 years ago
- 1 comment
#188 - [pre-commit.ci] pre-commit autoupdate
Pull Request -
State: closed - Opened by pre-commit-ci[bot] over 2 years ago
- 1 comment