ropensci/mcbette issues and pull requests

#45 - Reduce dependencies of package

Pull Request - State: closed - Opened by olivroy about 1 month ago - 1 comment

#44 - Fix floating point error

Issue - State: closed - Opened by richelbilderbeek almost 2 years ago

#43 - Feature request: speed up calculation

Issue - State: open - Opened by richelbilderbeek almost 4 years ago - 1 comment

#42 - How to run for all combinations of models?

Issue - State: closed - Opened by richelbilderbeek almost 4 years ago - 2 comments

#41 - Error: dir.exists(examples_folder) is not TRUE, due to not having installed BEAST2

Issue - State: closed - Opened by dksam almost 4 years ago - 6 comments

#40 - install.packages("mcbette") failed due to "ERROR: configuration failed for package ‘Rmpfr’".

Issue - State: closed - Opened by cjwoodruff50 almost 4 years ago - 5 comments

#39 - Error: dir.exists(examples_folder) is not TRUE on Windows: mcbette does not work under Windows

Issue - State: closed - Opened by stefaniebutland almost 4 years ago - 7 comments

#38 - Write blog post about mcbette before 2020-11-22 23:59

Issue - State: closed - Opened by richelbilderbeek almost 4 years ago - 3 comments

#37 - Process feedback JOSS

Issue - State: closed - Opened by richelbilderbeek almost 4 years ago - 3 comments

#36 - Process last rOpenSci feedback

Issue - State: closed - Opened by richelbilderbeek almost 4 years ago - 4 comments
Labels: medium

#35 - Submit to CRAN

Issue - State: closed - Opened by richelbilderbeek about 4 years ago - 4 comments

#34 - Add 'interpret_marg_lik_estimates' to interpret the results of 'est_marg_liks'

Issue - State: closed - Opened by richelbilderbeek about 4 years ago - 1 comment

#33 - Add `interpret_bayes_factor_log_lik`

Issue - State: closed - Opened by richelbilderbeek about 4 years ago - 1 comment

#32 - beastier dependency issue

Issue - State: closed - Opened by thijsjanzen about 4 years ago - 2 comments

#31 - Mention NS tutorial

Issue - State: open - Opened by richelbilderbeek over 4 years ago

#30 - Process feedback rOpenSci review

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 4 comments

#29 - 'mcbette_report' must show Java version

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#28 - mcbette_report must use cat

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#27 - Improve JOSS paper

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#26 - Add mcbette_self_test

Issue - State: closed - Opened by richelbilderbeek over 4 years ago

#25 - Estimate evidence for primates

Issue - State: open - Opened by richelbilderbeek over 4 years ago - 4 comments
Labels: depends

#24 - Use README.Rmd?

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#23 - Check setup

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#22 - goodpractice is right

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 12 comments

#21 - babette is on CRAN

Issue - State: closed - Opened by richelbilderbeek over 4 years ago

#20 - Document dependencies more explicitly

Issue - State: closed - Opened by richelbilderbeek over 4 years ago

#19 - Create mcbette_run

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#18 - Use https in links to BEAST2 in all packages

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 2 comments

#17 - https link for BEAST2

Pull Request - State: closed - Opened by maelle over 4 years ago - 3 comments

#16 - fix pkg name

Pull Request - State: closed - Opened by maelle over 4 years ago - 2 comments

#15 - Add 'paper.md' for JOSS

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 10 comments

#14 - Complete vignette again

Issue - State: closed - Opened by richelbilderbeek almost 5 years ago - 1 comment

#13 - Add 'update_mcbette'

Issue - State: closed - Opened by richelbilderbeek about 5 years ago - 1 comment

#12 - Can mcbette run on Peregrine?

Issue - State: closed - Opened by richelbilderbeek about 5 years ago - 4 comments

#11 - Give proper error message when running CBS with less than 6 taxa

Issue - State: closed - Opened by richelbilderbeek about 5 years ago - 3 comments

#10 - Allow use of 1 model

Issue - State: closed - Opened by richelbilderbeek about 5 years ago

#9 - Support Windows when using BEAST2 packages

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 1 comment

#8 - No warning if no internet connection, yet all packages needed are present

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 1 comment

#7 - Bug: in max(stats::na.omit(pir_out$inference_model_weight)) : no non-missing arguments to max; returning -Inf

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 2 comments

#6 - Only NA results

Issue - State: closed - Opened by thijsjanzen over 5 years ago - 11 comments

#5 - Installation on cluster, issue with Rmpfr

Issue - State: closed - Opened by thijsjanzen over 5 years ago - 3 comments

#4 - BEAST related error

Issue - State: closed - Opened by thijsjanzen over 5 years ago - 6 comments

#3 - Seperate BEAST2 options params in experiment

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 1 comment

#2 - Use 'inference_params' instead of lists of site models and clock models etc.

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 1 comment
Labels: high, depends

#1 - Calculate weights of likelihoods

Issue - State: closed - Opened by richelbilderbeek almost 6 years ago

GitHub / ropensci/mcbette issues and pull requests