Ecosyste.ms: Issues

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GitHub / richelbilderbeek/bbbq issues and pull requests

#12 - Redo Bianchi et al., 2017, figure 3 for MHC-II

Issue - State: open - Opened by richelbilderbeek over 2 years ago

#11 - Process lintr-bot feedback

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#10 - Use 13 MHC-II haplotypes

Issue - State: closed - Opened by richelbilderbeek over 4 years ago

#9 - How to get the total rate from two transition rates

Issue - State: closed - Opened by richelbilderbeek over 4 years ago - 1 comment

#8 - Check FLU transitition matrix

Issue - State: closed - Opened by richelbilderbeek almost 5 years ago

#7 - Count epitopes right

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 1 comment

#6 - Do other haplotypes

Issue - State: closed - Opened by richelbilderbeek almost 6 years ago - 3 comments

#5 - 3. Create FASTA with THMs

Issue - State: closed - Opened by richelbilderbeek about 6 years ago - 2 comments

#4 - 5. Predict HLA-binding x-mers

Issue - State: closed - Opened by richelbilderbeek about 6 years ago - 3 comments
Labels: depends

#3 - 4. Measure percentage of proteome that is TMH

Issue - State: closed - Opened by richelbilderbeek about 6 years ago - 1 comment
Labels: depends

#2 - 2. Determine TMH from pathogen proteome

Issue - State: closed - Opened by richelbilderbeek about 6 years ago - 1 comment

#1 - 1. Pick and download pathogen genome

Issue - State: closed - Opened by richelbilderbeek about 6 years ago - 2 comments