Ecosyste.ms: Issues

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GitHub / rhshah/iCallSV issues and pull requests

#46 - Can I use merge.txt instead of final.txt?

Issue - State: open - Opened by phoebe-xin-leung 5 months ago

#45 - set MPLCONFIGDIR to tempfile.mkdtemp() cause /tmp dir to fill up

Issue - State: open - Opened by ytidhar over 5 years ago - 2 comments

#44 - SV calling(tumor sample without normal)

Issue - State: closed - Opened by haoziyeung over 6 years ago - 1 comment
Labels: question

#43 - typo fix for dependencies

Pull Request - State: closed - Opened by aflyhorse over 6 years ago - 2 comments
Labels: bug

#42 - task 1 failed - "'unlist' is not an exported object from 'namespace:Biostrings'"

Issue - State: closed - Opened by haoziyeung over 6 years ago - 11 comments
Labels: help wanted, question

#41 - Update to support iAnnotateSV v1.09

Issue - State: open - Opened by rhshah over 6 years ago
Labels: enhancement

#40 - requirement update: pyvcf

Issue - State: closed - Opened by lozybean almost 7 years ago - 3 comments

#39 - Add RELA to genesToInclude and HotSpot List

Issue - State: open - Opened by rhshah over 7 years ago

#38 - Merge From Master

Pull Request - State: closed - Opened by rhshah over 7 years ago

#37 - Release

Pull Request - State: closed - Opened by rhshah over 7 years ago

#36 - Intron Fix

Pull Request - State: closed - Opened by rhshah over 7 years ago

#35 - Merge From Master

Pull Request - State: closed - Opened by rhshah over 7 years ago

#34 - Hot Fix for Event in Intron

Pull Request - State: closed - Opened by rhshah over 7 years ago

#33 - Missed SV

Issue - State: open - Opened by rhshah over 7 years ago

#32 - Release 0.0.7

Pull Request - State: closed - Opened by rhshah over 7 years ago

#31 - Revert "Multiple Bug Fixes and new release"

Pull Request - State: closed - Opened by rhshah over 7 years ago

#30 - Multiple Bug Fixes and new release

Pull Request - State: closed - Opened by rhshah over 7 years ago

#29 - Make Exception when Delly does not find any SV

Issue - State: closed - Opened by rhshah over 7 years ago - 1 comment

#28 - Incorrect breakpoint site description

Issue - State: closed - Opened by andurill over 7 years ago - 1 comment
Labels: invalid

#27 - Indexing SVs based on Chr and pos of the breakpoints

Issue - State: closed - Opened by andurill over 7 years ago - 4 comments
Labels: bug, question

#26 - Filter Deletion within Intron

Issue - State: closed - Opened by rhshah over 7 years ago
Labels: bug

#25 - Update Zenodo to reflect version 0.06

Issue - State: closed - Opened by rhshah almost 8 years ago
Labels: enhancement

#24 - Merge From Master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#23 - Making Release Tags

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#22 - Merge From Release

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#21 - Merge From Master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#20 - Quick Bug Fix

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#19 - Merge From Master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#18 - Workaround NaN

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#17 - Merged From Master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#16 - Float > INT

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#15 - Master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#14 - Development

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#13 - indentation issue

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#12 - indentation issue

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#11 - FLOAT=>INT

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#10 - FLOAT=>INT

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#9 - Merge pull request #1 from rhshah/master

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#8 - Merging from Development with minor issues

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#7 - Bug Fix

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#6 - perl usage bug fix converted "==" to is for matching a string

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#5 - Updated Docs and added color logging

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#4 - Updated config file to be consistent.

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#3 - Bug in final filtering

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#2 - Removing .empty from dataframe creation

Pull Request - State: closed - Opened by rhshah almost 8 years ago

#1 - Remove Comma The Log Statement

Issue - State: closed - Opened by rhshah almost 8 years ago