Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / rambaut/figtree issues and pull requests

#214 - Can't open simple trees

Issue - State: open - Opened by AMI-Systems 5 days ago

#212 - Import ColourScheme

Issue - State: open - Opened by salvatolab 3 months ago

#211 - Build and test for Linux/ARM64

Issue - State: closed - Opened by odidev 3 months ago - 1 comment

#210 - Freezing when organizing by node order - 1.4.5_pre

Issue - State: open - Opened by fvfreitas 7 months ago
Labels: bug

#209 - Date on circular tree

Issue - State: open - Opened by jsan4christ 8 months ago

#209 - Date on circular tree

Issue - State: open - Opened by jsan4christ 8 months ago

#208 - Cartoon and Save As... functions not working in v1.4.5_pre

Issue - State: open - Opened by kij93002 9 months ago - 2 comments

#207 - Draw polar tree from command line

Issue - State: open - Opened by dreamfly999 10 months ago - 1 comment

#206 - adding Bare Percent label format option for issue #205

Pull Request - State: open - Opened by zygoballus 10 months ago

#206 - adding Bare Percent label format option for issue #205

Pull Request - State: open - Opened by zygoballus 10 months ago

#205 - Add new branch label format option for bare percent

Issue - State: open - Opened by zygoballus 10 months ago

#205 - Add new branch label format option for bare percent

Issue - State: open - Opened by zygoballus 10 months ago

#203 - How compile from source (linux)

Issue - State: open - Opened by SergioB1983 11 months ago - 1 comment

#202 - fix crash when setting font size to 72

Pull Request - State: open - Opened by NoahNussbaumer 11 months ago

#202 - fix crash when setting font size to 72

Pull Request - State: open - Opened by NoahNussbaumer 11 months ago

#201 - Question on changing background color

Issue - State: open - Opened by manighanipoor 11 months ago

#201 - Question on changing background color

Issue - State: open - Opened by manighanipoor 11 months ago

#200 - Error when saving with version 1.4.5-Pre

Issue - State: open - Opened by safrye 11 months ago - 3 comments

#199 - issue with FigTree v1.4.5_pre.app

Issue - State: open - Opened by marianamateos 11 months ago

#199 - issue with FigTree v1.4.5_pre.app

Issue - State: open - Opened by marianamateos 11 months ago

#198 - unexpected highlighting next to root node

Issue - State: open - Opened by wzq123123 about 1 year ago - 3 comments

#198 - unexpected highlighting next to root node

Issue - State: open - Opened by wzq123123 about 1 year ago - 3 comments

#197 - i want display node and Branch Labels

Issue - State: open - Opened by Noure-bess about 1 year ago - 1 comment

#197 - i want display node and Branch Labels

Issue - State: open - Opened by Noure-bess about 1 year ago - 1 comment

#196 - Exporting tree as newick gives no response.

Issue - State: open - Opened by EyadElbahtety829 about 1 year ago - 2 comments

#195 - Scary warning message when opening in MacOS 11 (Big Sur)

Issue - State: closed - Opened by zygoballus about 1 year ago - 1 comment

#195 - Scary warning message when opening in MacOS 11 (Big Sur)

Issue - State: closed - Opened by zygoballus about 1 year ago - 1 comment

#194 - is this true?

Issue - State: open - Opened by liamxg over 1 year ago - 1 comment

#194 - is this true?

Issue - State: open - Opened by liamxg over 1 year ago - 1 comment

#193 - Cannot open tree with labelled nodes/branches

Issue - State: open - Opened by imogen-foote over 1 year ago - 6 comments

#193 - Cannot open tree with labelled nodes/branches

Issue - State: open - Opened by imogen-foote over 1 year ago - 6 comments

#192 - Cannot open figtree on Mac

Issue - State: closed - Opened by redHurt96 over 1 year ago - 1 comment

#192 - Cannot open figtree on Mac

Issue - State: closed - Opened by redHurt96 over 1 year ago - 1 comment

#190 - Displaying Orthofinder's species Tree

Issue - State: closed - Opened by J-Calvelo almost 2 years ago - 2 comments

#189 - Update univeralJavaApplicationStub 3.2.0 to 3.3.0 (latest).

Pull Request - State: closed - Opened by joelclim almost 2 years ago - 2 comments

#188 - Mac version cannot start

Issue - State: closed - Opened by walterxie almost 2 years ago - 4 comments

#187 - FigTree says "Missing closing ')' in tree" when there isn't one

Issue - State: closed - Opened by shbrainard almost 2 years ago - 1 comment

#186 - Doesn't update list of annotations for legend when loading from file

Issue - State: open - Opened by rambaut almost 2 years ago
Labels: bug

#185 - Figtree v1.4.4 crashes when loading a saved file

Issue - State: closed - Opened by JGLAHE about 2 years ago

#184 - Incorrect matching of tips to annotation

Issue - State: closed - Opened by AntonS-bio over 2 years ago - 1 comment
Labels: bug

#183 - Tip-shape colours

Issue - State: open - Opened by andreas-chrysostomou over 2 years ago - 2 comments
Labels: enhancement

#182 - Add Github Actions based CI for Linux x86_64 and aarch64

Pull Request - State: open - Opened by martin-g over 2 years ago

#181 - Can I setup colour range in this way in figtree

Issue - State: open - Opened by biozhajie over 2 years ago - 3 comments

#180 - [Question] Is ARM64 supported ?

Issue - State: closed - Opened by gancho-ivanov over 2 years ago - 3 comments

#179 - Cannot export tree images on macos

Issue - State: closed - Opened by TAKosch over 2 years ago - 2 comments

#178 - can not export PNG/PDF

Issue - State: closed - Opened by lly1214 over 2 years ago - 1 comment
Labels: bug

#177 - Error: Unable to access jarfile lib/figtree.jar

Issue - State: closed - Opened by B-1991-ing almost 3 years ago - 2 comments

#176 - java exception

Issue - State: closed - Opened by BettyAC about 3 years ago - 1 comment
Labels: invalid

#175 - Enable builds on Java 8

Pull Request - State: closed - Opened by jonchang about 3 years ago

#174 - empty tree

Issue - State: closed - Opened by jumanaghmno9 over 3 years ago

#173 - FigTree 1.4.4 does not find Java on apple M1 Big Sur

Issue - State: closed - Opened by cdoorenweerd over 3 years ago - 5 comments

#172 - dupliated taxa

Issue - State: closed - Opened by dvorikus over 3 years ago

#171 - FigTree fails to run on BigSur 11.3, on M1 CPU

Issue - State: closed - Opened by diekhans over 3 years ago - 1 comment

#170 - Newick files with comma-delimited labels load incorrectly

Issue - State: open - Opened by arendsee almost 4 years ago - 3 comments
Labels: bug

#169 - same MCC tree displays differently

Issue - State: closed - Opened by ctob2 almost 4 years ago - 1 comment

#168 - Cannot save as tree into Pdf and SVG file

Issue - State: closed - Opened by edwinsetiawan671 almost 4 years ago - 4 comments

#167 - Automatically hide scale bars when transforming branches

Issue - State: closed - Opened by MazzaMezze almost 4 years ago
Labels: enhancement

#166 - How FigTree calculates "Node Ages" node labels?

Issue - State: open - Opened by AlesBucek almost 4 years ago - 1 comment

#165 - Inconsistent Features

Issue - State: open - Opened by ninjatacoshell almost 4 years ago

#164 - How to remove bootstrap values that are not robust?

Issue - State: open - Opened by Niv94 about 4 years ago - 1 comment

#163 - Export tree with no branch length

Issue - State: open - Opened by afina-m about 4 years ago

#162 - FigTree unable to open RAxML bootstrap tree

Issue - State: open - Opened by twohrdrive over 4 years ago - 3 comments

#161 - FigTree loads tree, but won't display tree

Issue - State: open - Opened by ghost over 4 years ago - 2 comments

#160 - decimal dot vs decimal comma

Issue - State: open - Opened by aburzynski over 4 years ago - 3 comments

#159 - Rerooting tree doubles length of old outgroup

Issue - State: open - Opened by Hirun over 4 years ago - 1 comment

#158 - Painting different colors within a 'cartoon' triangle in proportion

Issue - State: open - Opened by DuPanxin over 4 years ago - 1 comment
Labels: enhancement

#156 - FigTree 1.4 crashes when collapsing clades with tip annotations

Issue - State: open - Opened by ZooPhy almost 5 years ago

#155 - Compatibility with high resolution monitors?

Issue - State: open - Opened by LysSanzMoreta almost 5 years ago

#154 - Update figtree script for Linux

Pull Request - State: closed - Opened by simonflood almost 5 years ago

#153 - Requires Java 1.6.0?

Issue - State: open - Opened by SilentGene almost 5 years ago - 5 comments

#152 - nwk file which MEGA generated can not open in figtree

Issue - State: open - Opened by ShawnWx2019 almost 5 years ago - 1 comment

#151 - Improve script's flexibility wrt location

Pull Request - State: open - Opened by niemasd almost 5 years ago

#150 - There is no undo?

Issue - State: closed - Opened by janxkoci about 5 years ago - 1 comment

#149 - Grid lines out of field after clicking reverse axis

Issue - State: open - Opened by santiagosnchez about 5 years ago - 3 comments

#148 - FigTree exports empty svg files

Issue - State: open - Opened by ingridole about 5 years ago - 17 comments

#147 - Collapsing branches causes Figtree to freeze

Issue - State: open - Opened by della-fix over 5 years ago - 1 comment

#146 - blurry label on windows

Issue - State: closed - Opened by binzuo142857 over 5 years ago - 1 comment

#145 - Setting origin on scale axis does not work

Issue - State: open - Opened by bjoelle over 5 years ago

#144 - Text in trees displayed as blocks

Issue - State: closed - Opened by DeondeJager over 5 years ago - 2 comments

#143 - HSB sliders for node labels lag

Issue - State: open - Opened by Steven-Kemp over 5 years ago

#142 - "node ages" "node height" "branch times" "branch lengths"

Issue - State: open - Opened by zhaoxvwahaha over 5 years ago - 1 comment

#141 - Lost tree definition after saving

Issue - State: open - Opened by eam12 over 5 years ago - 1 comment

#139 - Multi-line branch labels?

Issue - State: open - Opened by petercombs over 5 years ago - 3 comments

#138 - Provide line number and index on import error.

Issue - State: open - Opened by Dmole over 5 years ago

#137 - Messy output on Ubuntu 18.04

Issue - State: open - Opened by Dmole over 5 years ago - 1 comment

#136 - Number format error in reading a newick tree from SUMTREES

Issue - State: open - Opened by Alexei-Kassian almost 6 years ago - 2 comments

#135 - Branches won't show up in Figtree

Issue - State: closed - Opened by ghost almost 6 years ago - 1 comment

#134 - Paint tip labels as boxes colored by trait value

Pull Request - State: closed - Opened by msuchard almost 6 years ago

#133 - Extra jars aren't needed?

Issue - State: closed - Opened by yurivict almost 6 years ago

#132 - universal figtree bash script

Pull Request - State: open - Opened by schellt almost 6 years ago

#130 - How can I cite Figtree

Issue - State: closed - Opened by freddymonteiro about 6 years ago - 2 comments

#129 - crashes on launch under OS Sierra (10.12.6) and Java 10.0.1

Issue - State: closed - Opened by cmt2 about 6 years ago

#128 - Fails to build with OpenJDK 11

Issue - State: open - Opened by kloetzl about 6 years ago - 2 comments