qurit/PyTomography issues and pull requests

#81 - Development

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#80 - add kornia to required dependencies, fix 2DPET PSF modeling

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#79 - ModuleNotFoundError: No module named 'kornia'

Issue - State: closed - Opened by carluri over 1 year ago
Labels: bug

#78 - Make device CUDA when possible by default

Pull Request - State: closed - Opened by carluri over 1 year ago
Labels: enhancement

#77 - move from 'os' to 'PathLib'

Issue - State: closed - Opened by carluri over 1 year ago
Labels: enhancement

#75 - Update README to improve user engagement

Pull Request - State: closed - Opened by carluri over 1 year ago
Labels: documentation

#74 - Development

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#73 - change SystemMatrix functionality (SystemMatrix now abstract, must sp…

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#72 - PyTomography 0.8.0

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#71 - Updates from Lukework

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#70 - minor_multiple_changes

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#69 - Cardiac SPECT Reorientation

Issue - State: closed - Opened by MaziarSabouri over 1 year ago

#68 - Create DICOM output files from reconstructions on DICOM data

Issue - State: closed - Opened by lukepolson over 1 year ago

#67 - Code for v0.7.0

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#66 - All code for v0.7.0

Pull Request - State: closed - Opened by lukepolson over 1 year ago

#65 - Update lead_attenuation_values with 100-600keV Energy Range and Implement Linear Interpolation

Pull Request - State: closed - Opened by ObedDzik over 1 year ago

#64 - Update to version 0.6.0

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#63 - change version name

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#62 - change datafile names for SPECT collimation

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#61 - add multibed stitching functionality and fix rotation direction DICOM

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#60 - Update Datasheet Names in Data Folder, Create README file

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#59 - Updated `t_dicomdata.py` to use `dicom.get_psfmeta_from_scanner_params()` for `PSFMeta()` object initialization

Pull Request - State: closed - Opened by ahxmeds almost 2 years ago

#58 - Release 0.5.0

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#57 - modify simind/dicom io functions, change tutorials, update pytomograp…

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#56 - update c's to H's in documentation for system matrix

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#55 - Update Callback

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#54 - Create tutorial for creating own prior

Issue - State: closed - Opened by lukepolson almost 2 years ago

#53 - rename call to compute_gradient in prior classes

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#52 - test issue

Issue - State: closed - Opened by lukepolson almost 2 years ago

#51 - Add function in SIMIND section to save files to binary format

Issue - State: closed - Opened by lukepolson almost 2 years ago

#50 - Update DICOM reading code and documentation

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#49 - Test issue Monday #5

Issue - State: closed - Opened by lukepolson almost 2 years ago

#48 - Test Issue Monday.com #4

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#47 - Test issue Monday.com #3

Issue - State: closed - Opened by lukepolson almost 2 years ago - 5 comments

#46 - Test Issue for Monday.com #2

Issue - State: closed - Opened by lukepolson almost 2 years ago

#45 - Test Issue For Monday.com

Issue - State: closed - Opened by lukepolson almost 2 years ago

#44 - Rename Prior `call` method to `gradient`

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#43 - Generate XCat PET Data in SIMSET For Testing 3D PET Recon

Issue - State: closed - Opened by lukepolson almost 2 years ago

#42 - Table / Code to Obtain PSFMeta From DICOM Files Given Scanner Model

Issue - State: closed - Opened by lukepolson almost 2 years ago - 2 comments

#41 - Update Documentation So $c_{ij}$ is replaced with $H_{ij}$ for System Matrix

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#40 - update development to main

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#39 - Updated problem with dicom file

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#38 - Development

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#37 - Update Documentation, Remove Device as Argument, Fix HU2Mu for DICOM Loading

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#36 - updated conventions to match new restructuring

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#35 - big restructuring

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#34 - Remove `Net` from all classes

Issue - State: closed - Opened by lukepolson almost 2 years ago

#33 - Added PET Capabilities (only supports 2D, no scatter for now)

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#32 - fix RDP. Change priors so that quad,logcosh,rdp now inherit from new …

Pull Request - State: closed - Opened by lukepolson almost 2 years ago - 2 comments

#31 - Relative Difference Prior Gradient Not Defined Properly

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#30 - Add from future import annotations to files missing this import

Pull Request - State: closed - Opened by ahxmeds almost 2 years ago

#29 - 26 relativedifferenceprior runs out of memory for images at minimum larger than 256x256x384

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#28 - fix pyproject.toml to include package data

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#27 - `FileNotFoundError:` ../../../data/HU_to_mu.csv not found while using `get_HU2mu_coefficients()`

Issue - State: closed - Opened by ahxmeds almost 2 years ago - 1 comment

#26 - `RelativeDifferencePrior` runs out of memory for images (at minimum) larger than 256x256x384

Issue - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#25 - Update development to current main branch

Pull Request - State: closed - Opened by lukepolson almost 2 years ago - 1 comment

#24 - `from future import annotations` missing in certain files

Issue - State: closed - Opened by ahxmeds almost 2 years ago - 4 comments

#23 - renamed master to main, checking to see if things still work

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#22 - Merge pull request #20 from qurit/lukework

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#21 - Create documentation for developers

Issue - State: closed - Opened by carluri almost 2 years ago
Labels: documentation

#20 - add toml to dependencies for building documentation

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#19 - add github workflow support for building package whenever tagged version is pushed

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#18 - add github workflows for building documentation

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#17 - Lukework

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#16 - Change MIP in the documentation intro page to Coronal and Sagittal view of the reconstructed image

Issue - State: closed - Opened by carluri almost 2 years ago
Labels: documentation

#15 - Installation of PyTorch should be done by installation of PyTomography

Issue - State: closed - Opened by carluri almost 2 years ago - 1 comment
Labels: enhancement

#14 - Add objectives and current supported modalities

Pull Request - State: closed - Opened by carluri almost 2 years ago
Labels: documentation

#13 - update tutorials (data now uploaded)

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#12 - Review documentation intro page

Issue - State: closed - Opened by carluri almost 2 years ago - 2 comments
Labels: documentation

#11 - merge master to development

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#10 - fix tutorials and add global device

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#9 - added source code links to api

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#8 - added required optional dependencies to toml

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#7 - added required optional dependencies to toml

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#6 - update software version on readthedocs

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#5 - changed docs so that notebook code text has color

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#4 - update software version

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#3 - delete license, update dicom so that table is used, update dicom tuto…

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#2 - Delete getosemnet

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

#1 - Renaming corrections to mappings

Pull Request - State: closed - Opened by lukepolson almost 2 years ago

GitHub / qurit/PyTomography issues and pull requests