Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / qupath/qupath issues and pull requests
#1652 - Javadoc jars are missing from QuPath installations
Issue -
State: open - Opened by petebankhead 9 days ago
Labels: bug
#1651 - Prepare for v0.6.0-rc2
Pull Request -
State: closed - Opened by petebankhead 9 days ago
#1650 - Support message for TaskRunner
Pull Request -
State: closed - Opened by petebankhead 9 days ago
#1649 - Added Zarr writer GUI command
Pull Request -
State: closed - Opened by Rylern 10 days ago
- 1 comment
#1648 - Delay firing menu items from command list
Pull Request -
State: closed - Opened by petebankhead 11 days ago
#1647 - Some commands cannot be run from Command List
Issue -
State: closed - Opened by petebankhead 11 days ago
Labels: bug
#1646 - RAM is not freed when opening new images within a project
Issue -
State: closed - Opened by GXcells 11 days ago
- 1 comment
Labels: bug
#1645 - BioFormats tile size fix
Pull Request -
State: closed - Opened by Rylern 11 days ago
- 2 comments
#1644 - Shorten Classifications menu for easier access
Issue -
State: open - Opened by lacan 11 days ago
- 1 comment
Labels: enhancement
#1643 - Ensure tests use UTF-8
Pull Request -
State: closed - Opened by petebankhead 13 days ago
#1642 - Update to DJL v0.30.0
Pull Request -
State: closed - Opened by petebankhead 13 days ago
#1641 - Zarr writer and ConvertCommand improvements
Pull Request -
State: closed - Opened by Rylern 13 days ago
- 1 comment
#1640 - Deep Java Library problem
Issue -
State: closed - Opened by RAHoebe 13 days ago
- 4 comments
Labels: bug
#1639 - Speed up object masking
Pull Request -
State: closed - Opened by petebankhead 16 days ago
#1638 - Support remote ome-zarr
Pull Request -
State: closed - Opened by petebankhead 16 days ago
- 1 comment
#1637 - Back to snapshot version
Pull Request -
State: closed - Opened by petebankhead 16 days ago
#1636 - Cannot make DJL pytorch work for instanseg
Issue -
State: closed - Opened by GXcells 17 days ago
- 1 comment
Labels: bug
#1635 - StarDist extension doesn't work with QuPath 0.6
Issue -
State: closed - Opened by ofrag 17 days ago
- 3 comments
Labels: bug
#1634 - No CUDA available in instantseg
Issue -
State: closed - Opened by GXcells 17 days ago
- 1 comment
Labels: bug
#1633 - Update extensions, exclude transitive
Pull Request -
State: closed - Opened by petebankhead 18 days ago
#1632 - Update for rc1
Pull Request -
State: closed - Opened by petebankhead 18 days ago
#1631 - Attempt to bundle extensions
Pull Request -
State: closed - Opened by petebankhead 18 days ago
#1630 - Update ConvertCommand
Pull Request -
State: closed - Opened by petebankhead 18 days ago
#1629 - Improve parsing of timepoints
Pull Request -
State: closed - Opened by petebankhead 18 days ago
#1628 - Timepoint data is rarely available (or correct)
Issue -
State: closed - Opened by petebankhead 18 days ago
Labels: bug
#1627 - Recognize (ome).zarr with drag & drop
Pull Request -
State: closed - Opened by petebankhead 19 days ago
#1626 - Upgrade gradle, dependences
Pull Request -
State: closed - Opened by petebankhead 19 days ago
#1625 - Add Zarr support for convert-ome command
Pull Request -
State: closed - Opened by Rylern 20 days ago
- 4 comments
#1624 - Minor fixes
Pull Request -
State: closed - Opened by petebankhead 23 days ago
#1623 - Change detection line thickness when upsampling
Pull Request -
State: closed - Opened by petebankhead 24 days ago
- 2 comments
#1622 - Fix thumbnail reappearing bug in projects
Pull Request -
State: closed - Opened by petebankhead 24 days ago
#1621 - Introduce ObjectProcessor interface
Pull Request -
State: closed - Opened by petebankhead 25 days ago
- 2 comments
#1620 - Better handle symlinks
Pull Request -
State: closed - Opened by petebankhead 25 days ago
- 5 comments
#1619 - New OverlapFixer class
Pull Request -
State: closed - Opened by petebankhead 27 days ago
#1618 - Add Intersection-over-Minimum merger
Pull Request -
State: closed - Opened by petebankhead 30 days ago
#1617 - Remove ImageServer.finalize()
Pull Request -
State: closed - Opened by petebankhead 30 days ago
#1616 - Update Guava, JTS
Pull Request -
State: closed - Opened by petebankhead 30 days ago
#1615 - Reorder cell measurement names
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1614 - ROI-geometry conversion
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1613 - Right-click to change TMA core classification
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1612 - Use headings in templates
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1611 - Fix spacebar locked on in viewers
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1610 - Spacebar can be locked in an 'on' position within viewers
Issue -
State: closed - Opened by petebankhead about 1 month ago
Labels: bug
#1609 - 有中文汉化包吗
Issue -
State: closed - Opened by wangchen789 about 1 month ago
- 1 comment
Labels: question (please use image.sc!)
#1608 - Fix minor bugs, warnings & update gradlew
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1607 - Fix out-of-bounds cell detection
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1606 - Out-of-bounds tiles can result in detected cells being in the wrong place
Issue -
State: closed - Opened by petebankhead about 1 month ago
Labels: bug
#1605 - Extended Validation Code Signing Certificate
Issue -
State: closed - Opened by ojdeboer about 1 month ago
- 1 comment
Labels: question (please use image.sc!)
#1604 - Reinstate mergedJavadocs
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
- 1 comment
#1603 - Update to Java 21
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
- 2 comments
#1602 - Warn if similar classification & default colors
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1601 - Make viewer options persistent
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
- 3 comments
#1600 - Support temporary selection mode
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1599 - Selection mode improvements
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1598 - Code cleanup
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
- 1 comment
#1597 - Add findNeighbors support to hierarchy
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
- 1 comment
#1596 - Update DelaunayTools.java
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1595 - Fix display of underscores in class names
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1594 - Cleanup, remove deprecated methods
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1593 - Streamline PathObject and simplify working with classifications
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1592 - Improve MeasurementList implementation
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1591 - MeasurementList is not fully thread-safe
Issue -
State: closed - Opened by petebankhead about 1 month ago
- 1 comment
Labels: bug
#1590 - Questionable behavior with Delaunay cluster features
Issue -
State: open - Opened by petebankhead about 1 month ago
- 3 comments
Labels: bug
#1589 - Update dependencies
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1588 - PathClass in TMA grid view
Pull Request -
State: closed - Opened by alanocallaghan about 1 month ago
- 7 comments
#1587 - Improve metadata handling for projects and PathObjects
Pull Request -
State: closed - Opened by petebankhead about 1 month ago
#1586 - QuPath unable to open images using symbolic links
Issue -
State: closed - Opened by Rafael-Silva-Oliveira about 2 months ago
- 1 comment
Labels: bug
#1585 - Simplify PathIO
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1584 - Project sorting improvements
Pull Request -
State: closed - Opened by Rylern about 2 months ago
- 7 comments
#1583 - Added possibility to copy measurement map color map
Pull Request -
State: closed - Opened by Rylern about 2 months ago
- 1 comment
#1582 - Improve object name display in viewer
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1581 - Convert pixel type for BufferedImage and ImageServer
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1580 - Application keeps crashing/not responding
Issue -
State: closed - Opened by spatts14 about 2 months ago
- 3 comments
Labels: bug
#1579 - Avoid server loading during DefaultProject.saveImageData() if it was never loaded before
Pull Request -
State: closed - Opened by carlocastoldi about 2 months ago
- 2 comments
#1578 - Changed fireHierarchyChangedEvent to fireObjectAddedEvent
Pull Request -
State: closed - Opened by Rylern about 2 months ago
- 2 comments
#1577 - Close store if created in RenderedImageServer
Pull Request -
State: closed - Opened by Rylern about 2 months ago
- 2 comments
#1576 - Log less eagerly in DnnModel
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1575 - Use light scrollbars with javadocs
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
- 1 comment
#1574 - Set Javadoc viewer scrollbars to light mode
Pull Request -
State: closed - Opened by Rylern about 2 months ago
#1573 - Make script language fromString ignore case
Pull Request -
State: closed - Opened by alanocallaghan about 2 months ago
#1572 - Support TMA core classification
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1571 - Add GeometryTools.findLargestPolygon(Geometry) method
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1570 - Split unit tests
Pull Request -
State: closed - Opened by alanocallaghan about 2 months ago
#1569 - Dependency updates
Pull Request -
State: closed - Opened by petebankhead about 2 months ago
#1563 - Improved methods to access objects from PathObjectHierarchy
Pull Request -
State: closed - Opened by petebankhead 2 months ago
- 7 comments
#1561 - Thread leak in RenderedImageServer
Issue -
State: closed - Opened by jraufeisen 2 months ago
- 6 comments
Labels: bug
#1558 - Add Collection<ShapeFeatures> method for adding measurements
Pull Request -
State: closed - Opened by alanocallaghan 3 months ago
- 6 comments
#1554 - Core code for stain normalization
Pull Request -
State: closed - Opened by petebankhead 3 months ago
- 3 comments
#1550 - Detection Centroid Distances does not work across detection types (Detections vs Cells)
Issue -
State: open - Opened by lacan 3 months ago
- 4 comments
Labels: bug
#1544 - Implement scatter plot in measurement table & two measure classifier
Pull Request -
State: open - Opened by alanocallaghan 4 months ago
- 3 comments
#1522 - ImageJ macro runner can't transfer both cell nuclei & boundaries
Issue -
State: open - Opened by petebankhead 5 months ago
Labels: bug
#1517 - Make non-collapsible titledpanes not highlight on mouseover
Pull Request -
State: closed - Opened by alanocallaghan 5 months ago
- 6 comments
#1489 - Lazy-load ImageServer from ImageData
Pull Request -
State: closed - Opened by petebankhead 6 months ago
- 9 comments
#1488 - add option to ProjectImageEntry.readImageData() to avoid accessing the file image
Pull Request -
State: closed - Opened by carlocastoldi 6 months ago
- 6 comments
#1487 - Undo/Redo unexpected behavior after importing from file
Issue -
State: closed - Opened by SquidXTV 6 months ago
- 4 comments
Labels: bug
#1466 - Added synchronization to NumericMeasurementList
Pull Request -
State: closed - Opened by Rylern 8 months ago
- 1 comment
#1447 - Change openslide loading behaviour
Pull Request -
State: closed - Opened by alanocallaghan 9 months ago
- 7 comments
#1444 - ConcurrentModificationException when working with measurements
Issue -
State: closed - Opened by petebankhead 9 months ago
- 15 comments
Labels: bug
#1436 - "Hide QuPath" on macOS opens "About" window instead of hiding window
Issue -
State: closed - Opened by tbedau 10 months ago
- 5 comments
Labels: bug, outside-qupath
#1221 - Feature request: Colorbar for measurements maps
Issue -
State: closed - Opened by ofrag over 1 year ago
Labels: enhancement