Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / qupath/qupath-extension-instanseg issues and pull requests

#100 - Explore handling multiple outputs

Pull Request - State: open - Opened by petebankhead 5 months ago

#99 - Using `Pixel Width` and `Pixel Height` is not enough

Issue - State: closed - Opened by lacan 5 months ago - 1 comment

#99 - Using `Pixel Width` and `Pixel Height` is not enough

Issue - State: closed - Opened by lacan 5 months ago - 1 comment

#98 - Need to escape (or reverse) slashes in model path for Windows scripts

Issue - State: closed - Opened by petebankhead 5 months ago
Labels: bug

#97 - Optimize post-processing / resolving overlaps

Issue - State: open - Opened by petebankhead 5 months ago

#96 - Report when measuring objects

Pull Request - State: closed - Opened by petebankhead 5 months ago

#96 - Report when measuring objects

Pull Request - State: closed - Opened by petebankhead 5 months ago

#95 - brightfield nuclei and cells model?

Issue - State: closed - Opened by r100gs 5 months ago - 1 comment

#95 - brightfield nuclei and cells model?

Issue - State: closed - Opened by r100gs 5 months ago - 1 comment

#94 - Use TaskRunner for measurements

Pull Request - State: closed - Opened by petebankhead 5 months ago

#94 - Use TaskRunner for measurements

Pull Request - State: closed - Opened by petebankhead 5 months ago

#93 - download error

Issue - State: closed - Opened by r100gs 5 months ago - 2 comments

#93 - download error

Issue - State: closed - Opened by r100gs 5 months ago - 2 comments

#92 - Running instanseg script for whole project

Issue - State: closed - Opened by mikemcka 5 months ago - 2 comments

#92 - Running instanseg script for whole project

Issue - State: closed - Opened by mikemcka 5 months ago - 2 comments

#91 - System properties for debugging

Pull Request - State: closed - Opened by petebankhead 5 months ago - 1 comment

#91 - System properties for debugging

Pull Request - State: closed - Opened by petebankhead 5 months ago - 1 comment

#90 - Update PruneObjectOutputHandler.java

Pull Request - State: closed - Opened by petebankhead 5 months ago

#90 - Update PruneObjectOutputHandler.java

Pull Request - State: closed - Opened by petebankhead 5 months ago

#88 - PruneObjectOutputHandler can be unusably slow for complex parent ROIs

Issue - State: closed - Opened by petebankhead 5 months ago - 3 comments

#88 - PruneObjectOutputHandler can be unusably slow for complex parent ROIs

Issue - State: closed - Opened by petebankhead 5 months ago - 3 comments

#87 - Update README for v0.6.0-rc1

Pull Request - State: closed - Opened by petebankhead 5 months ago

#87 - Update README for v0.6.0-rc1

Pull Request - State: closed - Opened by petebankhead 5 months ago

#86 - Multiple prompts to download PyTorch

Issue - State: open - Opened by petebankhead 5 months ago

#85 - Fix PyTorch downloads when required

Pull Request - State: closed - Opened by petebankhead 5 months ago

#84 - Reduce property change eagerness

Pull Request - State: closed - Opened by petebankhead 5 months ago

#83 - Update DetectionMeasurer.java

Pull Request - State: closed - Opened by petebankhead 5 months ago

#83 - Update DetectionMeasurer.java

Pull Request - State: closed - Opened by petebankhead 5 months ago

#82 - Inherit secrets

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#82 - Inherit secrets

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#81 - Move env variables and bump action versions

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#81 - Move env variables and bump action versions

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#80 - Use gradle setup action instead of validate and build

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#80 - Use gradle setup action instead of validate and build

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#79 - Add license, maven publish

Pull Request - State: closed - Opened by petebankhead 5 months ago

#79 - Add license, maven publish

Pull Request - State: closed - Opened by petebankhead 5 months ago

#78 - Refactor actions

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#78 - Refactor actions

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#77 - Update README.md

Pull Request - State: closed - Opened by petebankhead 5 months ago

#76 - Add pixel size warning and minor linting

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#75 - Improve Model.toString()

Pull Request - State: closed - Opened by petebankhead 5 months ago - 3 comments

#75 - Improve Model.toString()

Pull Request - State: closed - Opened by petebankhead 5 months ago - 3 comments

#74 - Handle stain updates

Pull Request - State: closed - Opened by petebankhead 5 months ago

#74 - Handle stain updates

Pull Request - State: closed - Opened by petebankhead 5 months ago

#73 - Minor typos

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#73 - Minor typos

Pull Request - State: closed - Opened by alanocallaghan 5 months ago

#72 - Create readme

Pull Request - State: closed - Opened by petebankhead 5 months ago

#72 - Create readme

Pull Request - State: closed - Opened by petebankhead 5 months ago

#71 - Color deconvolution stains are never updated

Issue - State: closed - Opened by petebankhead 5 months ago
Labels: bug

#71 - Color deconvolution stains are never updated

Issue - State: closed - Opened by petebankhead 5 months ago
Labels: bug

#70 - Add tile padding as an option

Pull Request - State: closed - Opened by petebankhead 5 months ago

#70 - Add tile padding as an option

Pull Request - State: closed - Opened by petebankhead 5 months ago

#69 - Move model dir choice to top of dialog

Pull Request - State: closed - Opened by petebankhead 6 months ago - 4 comments

#68 - Fix model downloading bug

Pull Request - State: closed - Opened by petebankhead 6 months ago

#68 - Fix model downloading bug

Pull Request - State: closed - Opened by petebankhead 6 months ago

#67 - Local and downloaded models

Issue - State: open - Opened by petebankhead 6 months ago - 8 comments

#67 - Local and downloaded models

Issue - State: open - Opened by petebankhead 6 months ago - 8 comments

#66 - Figure out preferred interTileBounds value

Issue - State: open - Opened by petebankhead 6 months ago

#65 - Don't report error when user cancels...

Pull Request - State: closed - Opened by petebankhead 6 months ago

#64 - Support specifying output channels

Pull Request - State: closed - Opened by petebankhead 6 months ago - 1 comment

#64 - Support specifying output channels

Pull Request - State: closed - Opened by petebankhead 6 months ago - 1 comment

#63 - Avoid storing the ImageData in InstanSeg

Pull Request - State: closed - Opened by petebankhead 6 months ago - 4 comments

#63 - Avoid storing the ImageData in InstanSeg

Pull Request - State: closed - Opened by petebankhead 6 months ago - 4 comments

#62 - Option improvements

Pull Request - State: closed - Opened by petebankhead 6 months ago

#61 - Specify output channels (in scripts)

Pull Request - State: closed - Opened by petebankhead 6 months ago

#61 - Specify output channels (in scripts)

Pull Request - State: closed - Opened by petebankhead 6 months ago

#60 - Fix pixel size/downsample inconsistency

Pull Request - State: closed - Opened by petebankhead 6 months ago

#60 - Fix pixel size/downsample inconsistency

Pull Request - State: closed - Opened by petebankhead 6 months ago

#59 - Refactoring

Pull Request - State: closed - Opened by petebankhead 6 months ago

#59 - Refactoring

Pull Request - State: closed - Opened by petebankhead 6 months ago

#58 - Increase padding

Pull Request - State: closed - Opened by alanocallaghan 6 months ago

#57 - Increase padding, skip variance

Pull Request - State: closed - Opened by petebankhead 6 months ago

#57 - Increase padding, skip variance

Pull Request - State: closed - Opened by petebankhead 6 months ago

#56 - Performance improvement

Pull Request - State: closed - Opened by petebankhead 6 months ago - 4 comments

#55 - Parallel stream geometryToFilledRoi

Pull Request - State: closed - Opened by alanocallaghan 6 months ago

#54 - Download models

Pull Request - State: closed - Opened by alanocallaghan 6 months ago - 7 comments

#54 - Download models

Pull Request - State: closed - Opened by alanocallaghan 6 months ago - 7 comments

#53 - Improve colors and types

Pull Request - State: closed - Opened by petebankhead 6 months ago - 1 comment

#52 - Update gradle.yml

Pull Request - State: closed - Opened by alanocallaghan 6 months ago

#51 - Embrace Java 21

Pull Request - State: closed - Opened by petebankhead 6 months ago

#51 - Embrace Java 21

Pull Request - State: closed - Opened by petebankhead 6 months ago

#49 - Parallel stream geometryToFilledRoi

Pull Request - State: closed - Opened by alanocallaghan 6 months ago

#46 - Ensure directory watching works as expected

Issue - State: closed - Opened by alanocallaghan 6 months ago

#45 - Add option to make measurements

Pull Request - State: closed - Opened by alanocallaghan 6 months ago

#44 - Leos comments

Pull Request - State: closed - Opened by alanocallaghan 7 months ago

#44 - Leos comments

Pull Request - State: closed - Opened by alanocallaghan 7 months ago

#43 - Remove colouring

Issue - State: closed - Opened by alanocallaghan 7 months ago - 1 comment

#43 - Remove colouring

Issue - State: closed - Opened by alanocallaghan 7 months ago - 1 comment

#42 - Minor fixes

Pull Request - State: closed - Opened by Rylern 7 months ago - 3 comments

#42 - Minor fixes

Pull Request - State: closed - Opened by Rylern 7 months ago - 3 comments

#41 - Current image data setter

Pull Request - State: closed - Opened by alanocallaghan 7 months ago

#41 - Current image data setter

Pull Request - State: closed - Opened by alanocallaghan 7 months ago