quaquel/EMAworkbench issues and pull requests

#258 - Switch to Ruff linter

Issue - State: open - Opened by EwoutH over 1 year ago
Labels: ci

#257 - init.py: Set version to 2.5.0-dev

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 2 comments
Labels: ignore-for-release

#256 - init.py: Set version to 2.4.0 for release

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 1 comment
Labels: ignore-for-release

#255 - Fix pretty print for RealParameter and IntegerParameter

Pull Request - State: closed - Opened by quaquel over 1 year ago - 1 comment
Labels: bug

#253 - Enable documentation of connectors

Issue - State: open - Opened by quaquel over 1 year ago
Labels: docs

#252 - Fix bug in AutoadaptiveOutputSpaceExploration with wrong default probabilities

Pull Request - State: closed - Opened by quaquel over 1 year ago - 2 comments
Labels: bug

#251 - conf.py: Handle .ipynb and .py files separately

Pull Request - State: closed - Opened by EwoutH over 1 year ago
Labels: docs

#250 - change default value of um_p to be consistent with Borg documentation

Pull Request - State: closed - Opened by irene-sophia over 1 year ago - 2 comments
Labels: bug

#249 - Parallexaxis doc

Pull Request - State: closed - Opened by quaquel over 1 year ago - 3 comments
Labels: docs

#248 - Fix `pynetlogo` imports by decapitalizing `pyNetLogo`

Pull Request - State: closed - Opened by quaquel over 1 year ago - 4 comments
Labels: bug

#247 - Fix for stalling tests

Pull Request - State: closed - Opened by quaquel over 1 year ago - 2 comments
Labels: maintenance

#246 - Request: Sobol bubble plots

Issue - State: open - Opened by steipatr over 1 year ago

#245 - EMA cannot find pyNetLogo module - name change issue?

Issue - State: closed - Opened by steipatr over 1 year ago - 4 comments

#244 - Examples added to the docs

Pull Request - State: closed - Opened by quaquel over 1 year ago - 6 comments
Labels: docs

#243 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 2 comments
Labels: ci, maintenance, ignore-for-release

#242 - readthedocs: Add search ranking and use latest Python version

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 10 comments
Labels: docs

#241 - test for get_results and categorical fix

Pull Request - State: closed - Opened by quaquel over 1 year ago - 1 comment
Labels: bug, maintenance

#239 - Use `multiprocessing.shared_memory` to reduce pickling overhead in MultiprocessingEvaluator

Issue - State: open - Opened by EwoutH over 1 year ago
Labels: performance

#238 - Exploring potential of surrogate models

Issue - State: open - Opened by EwoutH over 1 year ago

#237 - Automatic single-parameter sensitivity analysis

Issue - State: open - Opened by EwoutH over 1 year ago - 2 comments

#236 - Pairs plotting dependent on load_results

Issue - State: closed - Opened by steipatr over 1 year ago - 2 comments
Labels: bug

#235 - Fix deprecation warning and dtype issue in flu_example.py

Pull Request - State: closed - Opened by quaquel over 1 year ago
Labels: bug

#234 - bugfix for warning on number of processes and max_processes

Pull Request - State: closed - Opened by quaquel over 1 year ago
Labels: bug

#233 - util: Speed up `combine` by ~8x

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 6 comments
Labels: enhancement, performance

#232 - callbacks: Improve performance of _store_outcomes by ~35x

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 20 comments
Labels: enhancement, performance

#231 - Add "How to cite" to README.md

Issue - State: closed - Opened by mikhailsirenko over 1 year ago - 2 comments

#230 - CI: Set the timeout specifically for the pytest step

Pull Request - State: closed - Opened by EwoutH over 1 year ago - 1 comment
Labels: ci, ignore-for-release

#229 - optional preallocation in callback based on outcome shape and type

Pull Request - State: closed - Opened by quaquel over 1 year ago
Labels: feature

#228 - fixes a bug where Prim modifies the experiments array

Pull Request - State: closed - Opened by quaquel over 1 year ago
Labels: bug

#227 - Fix Matplotlib and SciPy deprecations

Pull Request - State: closed - Opened by EwoutH over 1 year ago
Labels: maintenance

#226 - GitHub actions stalling on Ubuntu?

Issue - State: closed - Opened by quaquel over 1 year ago - 6 comments
Labels: maintenance

#225 - Altair missing as dependency

Issue - State: closed - Opened by quaquel over 1 year ago - 2 comments

#224 - fixes broken link to installation instructions

Pull Request - State: closed - Opened by quaquel over 1 year ago
Labels: bug, docs

#223 - Import Error: epsilon_nondominated

Issue - State: closed - Opened by SnuggleBug91 over 1 year ago - 8 comments

#222 - add `metric` argument to allow for other linkages

Pull Request - State: closed - Opened by mikhailsirenko over 1 year ago - 6 comments

#221 - CI: Timeout build job after 20 minutes

Pull Request - State: closed - Opened by EwoutH almost 2 years ago
Labels: ci, ignore-for-release

#220 - Docs: Fix developer installation commands by removing a space

Pull Request - State: closed - Opened by EwoutH almost 2 years ago
Labels: bug, docs

#219 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: ci, maintenance, ignore-for-release

#218 - clusterer: Update AgglomerativeClustering keyword to fix deprecation

Pull Request - State: closed - Opened by EwoutH almost 2 years ago - 3 comments
Labels: maintenance, dependency

#217 - CI: Add job that runs tests with pre-release dependencies

Pull Request - State: closed - Opened by EwoutH almost 2 years ago - 8 comments
Labels: ci

#216 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment
Labels: maintenance, ignore-for-release

#215 - version bump to 2.4.0-dev

Pull Request - State: closed - Opened by quaquel about 2 years ago - 1 comment
Labels: ignore-for-release

#214 - pyproject.toml: Install stable statsmodels on Python 3.11 again

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: maintenance, dependency, ignore-for-release

#213 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment
Labels: ci, ignore-for-release

#212 - Add Dependabot configuration for GitHub Actions update check

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: ci, ignore-for-release, meta

#211 - Replace deprecated `saltelli` with `sobol` SALib 1.4.6+.

Pull Request - State: closed - Opened by quaquel about 2 years ago - 2 comments
Labels: maintenance, dependency

#210 - release of version 2.3

Pull Request - State: closed - Opened by quaquel about 2 years ago - 13 comments

#209 - Adds CITATION.cff

Pull Request - State: closed - Opened by quaquel about 2 years ago - 1 comment

#208 - Make changelog work again

Pull Request - State: closed - Opened by quaquel about 2 years ago - 3 comments
Labels: bug

#207 - Restore changelog in Read the Docs

Issue - State: closed - Opened by EwoutH about 2 years ago
Labels: docs

#206 - release CI: pypa/gh-action-pypi-publish version

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: ci, maintenance, ignore-for-release

#205 - Re-run notebooks periodically to catch warnings and errors

Issue - State: open - Opened by EwoutH about 2 years ago
Labels: maintenance

#204 - changelog in two places

Issue - State: closed - Opened by quaquel about 2 years ago
Labels: docs

#203 - Improve unittests for em_framework

Issue - State: open - Opened by EwoutH about 2 years ago - 1 comment
Labels: testing

#202 - Fix Matplotlib, ipyparallel and dict deprecation warnings

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 2 comments
Labels: maintenance, dependency

#201 - Fix future/deprecation warning

Issue - State: open - Opened by EwoutH about 2 years ago - 10 comments
Labels: maintenance, dependency

#200 - Update Contributing.md with instructions how to merge PRs

Pull Request - State: closed - Opened by EwoutH about 2 years ago
Labels: docs, meta

#199 - Update Readme with an introduction and documentation, installation and contribution sections

Pull Request - State: closed - Opened by EwoutH about 2 years ago
Labels: docs, meta

#198 - Provide instructions how to cite the EMAworkbench

Issue - State: closed - Opened by EwoutH about 2 years ago - 4 comments
Labels: docs

#197 - Enable GitHub Discussions

Issue - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: meta

#196 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 2 comments

#195 - Fix spelling mistakes

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 5 comments
Labels: docs, maintenance

#194 - Improved directed search tutorial

Pull Request - State: closed - Opened by quaquel about 2 years ago - 12 comments
Labels: docs

#193 - Convergence tracking

Pull Request - State: closed - Opened by quaquel about 2 years ago - 5 comments
Labels: enhancement, feature

#192 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment
Labels: ci, maintenance, ignore-for-release

#191 - Run optimization for multiple seeds through evaluator.optimize

Issue - State: open - Opened by quaquel about 2 years ago
Labels: enhancement

#190 - 2.2.1 release: Cherry picks, update changelog and bump version

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 3 comments
Labels: bug, docs, ignore-for-release

#187 - convergence tracking of optimization

Issue - State: closed - Opened by quaquel about 2 years ago
Labels: enhancement

#184 - Rhodium docs

Pull Request - State: closed - Opened by quaquel about 2 years ago - 9 comments
Labels: docs

#180 - [pre-commit.ci] auto fixes from pre-commit.com hooks

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: maintenance, ignore-for-release

#176 - use masked arrays for storing outcomes

Pull Request - State: closed - Opened by quaquel about 2 years ago - 4 comments
Labels: bug

#175 - enable passing shape as keyword argument in outcomes

Issue - State: closed - Opened by quaquel about 2 years ago
Labels: feature

#172 - Discuss and document GitHub merge strategies

Issue - State: closed - Opened by EwoutH about 2 years ago - 1 comment
Labels: maintenance

#170 - Output space exploration

Pull Request - State: closed - Opened by quaquel about 2 years ago - 17 comments
Labels: feature

#164 - Create templates for sorting issues into bug reports, feature requests, etc.

Issue - State: open - Opened by EwoutH about 2 years ago - 1 comment
Labels: meta

#158 - Update Readme.md and create changelog.md and contributing.md docs

Issue - State: closed - Opened by EwoutH about 2 years ago
Labels: docs

#157 - Create overview/docs of examples

Issue - State: closed - Opened by EwoutH about 2 years ago - 5 comments
Labels: docs

#156 - CI: Start testing on Python 3.11

Pull Request - State: closed - Opened by EwoutH about 2 years ago - 4 comments
Labels: ci, dependency

#152 - Create release.yml file for automatic release notes generation

Pull Request - State: closed - Opened by EwoutH over 2 years ago - 1 comment
Labels: ci, meta

#150 - optimization.py: Fix "epsilons" keyword argument in `_optimize()`

Pull Request - State: closed - Opened by EwoutH over 2 years ago - 6 comments
Labels: bug, testing

#149 - Docs: Expand on HyperVolume minimum and maximum parameters

Issue - State: closed - Opened by EwoutH over 2 years ago - 1 comment
Labels: docs

#147 - Docs: Expand Robust Search tutorial

Issue - State: closed - Opened by EwoutH over 2 years ago - 7 comments
Labels: docs

#141 - Allow changing the figure size of a `parcoords.ParallelAxes()` plot

Issue - State: closed - Opened by EwoutH over 2 years ago - 3 comments
Labels: docs

#124 - [Feature] Support inputting multiple points (in a list) with PrimBox.inspect()

Issue - State: closed - Opened by EwoutH over 2 years ago - 4 comments
Labels: enhancement

#120 - Consider using Scipy stats.qmc module for Quasi-Monte Carlo samplers

Issue - State: open - Opened by EwoutH over 2 years ago - 3 comments

#102 - MESA example

Issue - State: closed - Opened by TabernaA over 3 years ago - 28 comments
Labels: enhancement, docs

#99 - WIP: KDE pairplot in PRIM analysis

Pull Request - State: closed - Opened by jasonrwang over 3 years ago - 2 comments
Labels: enhancement

#98 - KDE/Contour plot option in PRIM show_pairs

Issue - State: closed - Opened by jasonrwang over 3 years ago - 12 comments
Labels: enhancement

#82 - Plot ticklabels for KDE over time

Issue - State: open - Opened by alexanderdrent over 4 years ago - 4 comments

#73 - Prim pairs scatter plot figure configuration

Issue - State: closed - Opened by robcalon almost 5 years ago - 3 comments
Labels: enhancement

#62 - Add control for random state

Issue - State: open - Opened by jpn-- over 5 years ago - 9 comments
Labels: enhancement

#45 - Load model configuration from a YAML file

Issue - State: open - Opened by jpn-- almost 6 years ago - 9 comments
Labels: enhancement

#35 - EMAworkbench and Rhodium

Issue - State: closed - Opened by cedavidyang about 6 years ago - 5 comments
Labels: docs

GitHub / quaquel/EMAworkbench issues and pull requests