pyushkevich/c3d issues and pull requests

#43 - added preprocessing of positions to ExtractSlice.cxx to ensure that comma separated list and position_spec for percent value amounts to the same slices, e.g. that '-slice z 40%,45%,50%,55%,60%' produces the same slices as '-slice z 40%:5%:60%'

Pull Request - State: open - Opened by br-cpvc 15 days ago - 1 comment

#42 - fixed -slice and -slice-all to correctly handling slice position increments when the increment value v in the position_spec s:v:e amounts to a floating point value

Pull Request - State: closed - Opened by br-cpvc 23 days ago - 1 comment

#41 - fixed warnings and configure errors using newer cmake

Pull Request - State: closed - Opened by jilei-hao 2 months ago

#40 - regression: fails to compile with itk versions newer than 4.12.2

Pull Request - State: open - Opened by br-cpvc 5 months ago - 1 comment

#39 - minor corrections to previous commit: fixed -oomc command when using multiple components and multiple files

Pull Request - State: open - Opened by br-cpvc 5 months ago - 1 comment

#38 - Fixed errors and warnings building with ITK 5.4

Pull Request - State: closed - Opened by jilei-hao 7 months ago

#37 - extend -slice and -slice-all commands to support more than on position entry using comma separated input

Pull Request - State: closed - Opened by br-cpvc 8 months ago - 1 comment

#36 - fixed -oomc command when using multiple components and multiple output files

Pull Request - State: closed - Opened by br-cpvc 8 months ago

#35 - Fixed compiling error for gcc/gxx version 9.4.0 (included with Ubuntu 20.04) and older

Pull Request - State: closed - Opened by br-cpvc 8 months ago

#34 - Augmented -info-full command's output for nifti meta data field 'datatype' with easy to read nifti_datatype_to_string function's output

Pull Request - State: closed - Opened by br-cpvc 8 months ago

#33 - Add support to build with ITK5 (and keep support for ITK4)

Pull Request - State: closed - Opened by carandraug 10 months ago - 3 comments

#32 - -origin not using NIFTI coordinates

Issue - State: open - Opened by cookpa 12 months ago

#31 - Itksnap flextype

Pull Request - State: closed - Opened by pyushkevich about 1 year ago

#30 - Fails to build with a modern toolchain on conda-forge

Issue - State: open - Opened by ghisvail about 1 year ago - 1 comment

#29 - -rms fixes

Pull Request - State: open - Opened by cookpa over 1 year ago

#28 - ENH: "round up" image dimensions in the output space with -resample-mm

Pull Request - State: open - Opened by cookpa over 1 year ago

#27 - Misplaced parenthesis in -resample-mm

Issue - State: open - Opened by cajgfinger over 1 year ago - 1 comment

#26 - ITK 4 support for stand alone build

Pull Request - State: open - Opened by br-cpvc over 1 year ago - 3 comments

#25 - Added -mv, -majority-vote command

Pull Request - State: closed - Opened by br-cpvc almost 2 years ago - 1 comment

#24 - extending -otsu with parameters to add multiple threshold functionality , plus a lot of small fixes on documentation and comments

Pull Request - State: closed - Opened by br-cpvc almost 2 years ago - 1 comment

#23 - extending -otsu with parameters to add multiple threshold functionality

Pull Request - State: closed - Opened by br-cpvc almost 2 years ago - 4 comments

#22 - added new command -label-voting, plus a lot of small fixes on documentation and comments

Pull Request - State: closed - Opened by br-cpvc almost 2 years ago - 1 comment

#21 - Added -tolerance command

Pull Request - State: closed - Opened by br-cpvc almost 2 years ago - 1 comment

#20 - cli option to set value for SetGlobalDefaultCoordinateTolerance / SetGlobalDefaultDirectionTolerance

Issue - State: closed - Opened by br-cpvc almost 2 years ago - 2 comments

#19 - Failed to build on Ubuntu 20.04

Issue - State: open - Opened by MRIDude about 2 years ago - 1 comment

#18 - -rms doesn't compute RMS

Issue - State: open - Opened by cookpa over 2 years ago - 2 comments

#17 - fail to build c3d with the master branch

Issue - State: open - Opened by hubutui over 2 years ago - 1 comment

#16 - BUG: -resample-mm created wrong dimensions for small voxels

Pull Request - State: closed - Opened by cookpa about 3 years ago

#15 - ENH: Additional fixes for wrap filter

Pull Request - State: closed - Opened by cookpa about 3 years ago - 3 comments

#14 - BUG: Use itkCyclicShiftImageFilter instead of shifting voxels by hand

Pull Request - State: closed - Opened by cookpa about 3 years ago - 1 comment

#13 - Offset in wrapped voxels with -wrap command

Issue - State: closed - Opened by cookpa about 3 years ago

#12 - Enable processing 4d size vector for c4d

Issue - State: open - Opened by jilei-hao about 3 years ago

#11 - czi-60: added multi-label smoothing command

Pull Request - State: closed - Opened by jilei-hao about 3 years ago

#10 - Orient 4D

Pull Request - State: closed - Opened by osandvold302 about 3 years ago

#9 - Provide conda-forge package

Issue - State: closed - Opened by ghisvail over 3 years ago - 17 comments

#8 - Itk5

Pull Request - State: open - Opened by crossmanith over 3 years ago - 1 comment

#7 - -resample-iso raises the exception Unknown command

Issue - State: closed - Opened by MehdiShekarnabi over 3 years ago - 5 comments

#6 - Building C3D on Ubuntu 20.04

Issue - State: open - Opened by cepa995 over 3 years ago - 3 comments

#5 - Fix boundary check in -insert

Pull Request - State: closed - Opened by fx-carton over 3 years ago

#4 - Add morphological contour interpolation operator

Pull Request - State: closed - Opened by fx-carton over 3 years ago

#3 - -trans CLI option not recognised

Issue - State: closed - Opened by tomfrankkirk over 4 years ago - 2 comments

#2 - -pad-to issue

Issue - State: closed - Opened by cpwardell over 4 years ago - 1 comment

#1 - Compilation problem on Fedora

Issue - State: open - Opened by alcir almost 5 years ago - 5 comments

GitHub / pyushkevich/c3d issues and pull requests