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GitHub / python-microscopy/python-microscopy issues and pull requests

#1551 - raster scan camera shim

Pull Request - State: open - Opened by barentine over 1 year ago - 6 comments

#1549 - [BUG] Alpha for surfaces only working on 1/4 of screen Mac M1

Issue - State: open - Opened by zacsimile over 1 year ago
Labels: bug

#1548 - small fix: string conversion of session dir before use in replace method

Pull Request - State: closed - Opened by csoeller over 1 year ago - 3 comments

#1548 - small fix: string conversion of session dir before use in replace method

Pull Request - State: closed - Opened by csoeller over 1 year ago - 2 comments

#1547 - fix remaining import leftover

Pull Request - State: closed - Opened by csoeller over 1 year ago

#1547 - fix remaining import leftover

Pull Request - State: closed - Opened by csoeller over 1 year ago - 1 comment

#1546 - Issue 1527

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1546 - Issue 1527

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1545 - [BUG] ids peak support for uEye-only cameras issues

Issue - State: closed - Opened by barentine over 1 year ago - 2 comments
Labels: bug

#1543 - image_bounds_superset

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 4 comments

#1543 - image_bounds_superset

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 4 comments

#1542 - Session paths handling

Pull Request - State: closed - Opened by csoeller over 1 year ago - 13 comments

#1542 - Session paths handling

Pull Request - State: closed - Opened by csoeller over 1 year ago - 12 comments

#1541 - set new imagebounds when loading a session

Pull Request - State: closed - Opened by csoeller over 1 year ago - 2 comments

#1540 - Fix PYMEAcquire regression when no z piezo

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1539 - Fix uc480 regression

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1538 - Make rule-based analysis work with different acquisition types

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 3 comments

#1538 - Make rule-based analysis work with different acquisition types

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 2 comments

#1537 - without the missing wx import dh5view fails

Pull Request - State: closed - Opened by csoeller over 1 year ago - 1 comment

#1537 - without the missing wx import dh5view fails

Pull Request - State: closed - Opened by csoeller over 1 year ago - 2 comments

#1536 - Olympus IX81 control code with command set - currently halogen lamp only

Pull Request - State: closed - Opened by Yujin-Bao over 1 year ago - 3 comments

#1536 - Olympus IX81 control code with command set - currently halogen lamp only

Pull Request - State: closed - Opened by Yujin-Bao over 1 year ago - 3 comments

#1535 - Fix cluster analysis regression

Pull Request - State: open - Opened by David-Baddeley over 1 year ago

#1535 - Fix cluster analysis regression

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1534 - Fix rotation matrix

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1534 - Fix rotation matrix

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago

#1532 - fix point sprite regression

Pull Request - State: open - Opened by David-Baddeley over 1 year ago

#1532 - fix point sprite regression

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 1 comment

#1531 - Fix for TypeError when no Track Fiducials selected

Pull Request - State: closed - Opened by Yujin-Bao over 1 year ago - 2 comments

#1531 - Fix for TypeError when no Track Fiducials selected

Pull Request - State: closed - Opened by Yujin-Bao over 1 year ago - 3 comments

#1530 - Initial steps to move away from deprecated OpenGL functionality

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 18 comments

#1530 - Initial steps to move away from deprecated OpenGL functionality

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 21 comments

#1529 - Add a labels layer type for annotated tabular data

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 1 comment

#1529 - Add a labels layer type for annotated tabular data

Pull Request - State: closed - Opened by David-Baddeley over 1 year ago - 1 comment

#1528 - make version string compilation a little more robust

Pull Request - State: closed - Opened by csoeller over 1 year ago

#1528 - make version string compilation a little more robust

Pull Request - State: closed - Opened by csoeller over 1 year ago - 1 comment

#1526 - FRC canvas set title fix for compat with newer matplotlibs

Pull Request - State: closed - Opened by csoeller over 1 year ago - 1 comment

#1526 - FRC canvas set title fix for compat with newer matplotlibs

Pull Request - State: closed - Opened by csoeller over 1 year ago - 1 comment

#1525 - [BUG] FRC canvas set title error with matplotlib > 3.4

Issue - State: open - Opened by csoeller over 1 year ago
Labels: bug

#1524 - Plugin factory

Pull Request - State: open - Opened by David-Baddeley over 1 year ago

#1524 - Plugin factory

Pull Request - State: open - Opened by David-Baddeley over 1 year ago - 2 comments

#1523 - PYMEVis extra datasources

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 16 comments

#1523 - PYMEVis extra datasources

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 16 comments

#1522 - OIDICFrameSource tweaks

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 5 comments

#1522 - OIDICFrameSource tweaks

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 5 comments

#1521 - [ENHANCEMENT] recipe input modules for some scenarios

Issue - State: open - Opened by csoeller almost 2 years ago
Labels: enhancement

#1520 - point quiver enginer/layer for single molecule orientation microscopy data

Pull Request - State: open - Opened by barentine almost 2 years ago - 2 comments

#1519 - GUI recipe delete

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 2 comments

#1518 - [ENHANCEMENT] Title the localization analysis `Test This Frame` plots, or remove them

Issue - State: open - Opened by barentine almost 2 years ago - 1 comment
Labels: enhancement

#1517 - [ENHANCEMENT] un-hardcode some things in Corrections > Fiducials

Issue - State: open - Opened by barentine almost 2 years ago
Labels: enhancement

#1516 - [ENHANCEMENT] simple way to graphically delete a recipe module

Issue - State: open - Opened by barentine almost 2 years ago
Labels: enhancement

#1515 - fix cropped im metadata so it is serializable

Pull Request - State: closed - Opened by barentine almost 2 years ago

#1515 - fix cropped im metadata so it is serializable

Pull Request - State: closed - Opened by barentine almost 2 years ago

#1514 - make scipy.stats.mode call compatible with scipy>=1.10

Pull Request - State: closed - Opened by barentine almost 2 years ago - 4 comments

#1514 - make scipy.stats.mode call compatible with scipy>=1.10

Pull Request - State: closed - Opened by barentine almost 2 years ago - 4 comments

#1512 - protocol termination - adjust OnFinish logic so that any non-termination tasks are skipped

Pull Request - State: closed - Opened by csoeller almost 2 years ago - 1 comment

#1511 - Add a protocol for fluorescence capturing

Pull Request - State: closed - Opened by Yujin-Bao almost 2 years ago - 4 comments

#1511 - Add a protocol for fluorescence capturing

Pull Request - State: closed - Opened by Yujin-Bao almost 2 years ago - 4 comments

#1509 - Fix for performance issue with remote spooling

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 1 comment

#1508 - Fix dialog windows in dark mode

Pull Request - State: closed - Opened by zacsimile almost 2 years ago

#1508 - Fix dialog windows in dark mode

Pull Request - State: closed - Opened by zacsimile almost 2 years ago

#1507 - [ENHANCEMENT] Bump dependencies, fix packaging

Issue - State: open - Opened by David-Baddeley almost 2 years ago
Labels: enhancement

#1506 - More py310 compatability fixes

Pull Request - State: open - Opened by csoeller almost 2 years ago

#1506 - More py310 compatability fixes

Pull Request - State: closed - Opened by csoeller almost 2 years ago - 1 comment

#1505 - [BUG] wx._core.wxAssertionError when adding recipe modules

Issue - State: closed - Opened by Yujin-Bao almost 2 years ago - 8 comments
Labels: bug

#1502 - PCO index out of bounds fix

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 7 comments

#1502 - PCO index out of bounds fix

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 7 comments

#1501 - Modification to #1497

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 1 comment

#1501 - Modification to #1497

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 1 comment

#1500 - Dark mode traits

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 9 comments

#1500 - Dark mode traits

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 2 comments

#1499 - [BUG] Unable to restore layers tab after unpinning on macOS

Issue - State: closed - Opened by zacsimile almost 2 years ago - 3 comments
Labels: bug

#1498 - Changes to text import behavior.

Pull Request - State: closed - Opened by zacsimile almost 2 years ago

#1498 - Changes to text import behavior.

Pull Request - State: closed - Opened by zacsimile almost 2 years ago

#1497 - Small bugfix and follow-up on PR#1495

Pull Request - State: closed - Opened by Yujin-Bao almost 2 years ago - 3 comments

#1497 - Small bugfix and follow-up on PR#1495

Pull Request - State: closed - Opened by Yujin-Bao almost 2 years ago - 3 comments

#1495 - Queued actions improvements

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 2 comments

#1495 - Queued actions improvements

Pull Request - State: closed - Opened by David-Baddeley almost 2 years ago - 2 comments

#1494 - [BUG] dependency for newish fit _factory does not get built?

Issue - State: open - Opened by csoeller almost 2 years ago
Labels: bug

#1493 - scaffold for sub-pixel drift correction for time series

Pull Request - State: open - Opened by Yujin-Bao about 2 years ago

#1493 - scaffold for sub-pixel drift correction for time series

Pull Request - State: open - Opened by Yujin-Bao about 2 years ago - 9 comments

#1492 - Spooling refactoring

Pull Request - State: closed - Opened by David-Baddeley about 2 years ago - 8 comments

#1492 - Spooling refactoring

Pull Request - State: open - Opened by David-Baddeley about 2 years ago

#1491 - [SUPPORT] Saving filtered localizations

Issue - State: closed - Opened by loekloek about 2 years ago

#1490 - Spherical Harmonics Fit Error

Issue - State: open - Opened by loekloek about 2 years ago