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GitHub / python-microscopy/python-microscopy issues and pull requests

Labelled with: bug

#1636 - [BUG] can't import rules on editable meson installs

Issue - State: open - Opened by barentine 26 days ago - 1 comment
Labels: bug

#1623 - [BUG] PYME has missing requirement on pywin32 on Windows

Issue - State: open - Opened by csoeller 3 months ago - 7 comments
Labels: bug

#1597 - [BUG] default clipping cuts of data with negative coordinates in PYMEVis

Issue - State: closed - Opened by csoeller 10 months ago - 1 comment
Labels: bug

#1592 - [BUG] with latest commits pipeline.recipe.toYAML() fails and thus breaks a number of things

Issue - State: closed - Opened by csoeller 11 months ago - 3 comments
Labels: bug

#1591 - [BUG] bug in PYME.LMVis.visCore with PYME warnings remaining

Issue - State: closed - Opened by Yujin-Bao 11 months ago - 1 comment
Labels: bug

#1588 - [BUG] blobfinding still uses scipy.X calls for numpy methods

Issue - State: closed - Opened by csoeller 11 months ago - 1 comment
Labels: bug

#1577 - [BUG] squlite_ns bug with recent sqlite packages

Issue - State: closed - Opened by csoeller about 1 year ago - 2 comments
Labels: bug

#1576 - [BUG] failing to open some .h5r files

Issue - State: closed - Opened by csoeller about 1 year ago - 2 comments
Labels: bug

#1567 - [BUG] 'DictFloatEditList' object has no attribute 'makeColumnEditable'

Issue - State: closed - Opened by csoeller about 1 year ago - 1 comment
Labels: bug

#1562 - [BUG] `setup.py develop` fails for for `setuptools>=65`

Issue - State: open - Opened by zacsimile about 1 year ago - 8 comments
Labels: bug

#1549 - [BUG] Alpha for surfaces only working on 1/4 of screen Mac M1

Issue - State: open - Opened by zacsimile over 1 year ago
Labels: bug

#1545 - [BUG] ids peak support for uEye-only cameras issues

Issue - State: closed - Opened by barentine over 1 year ago - 2 comments
Labels: bug

#1525 - [BUG] FRC canvas set title error with matplotlib > 3.4

Issue - State: open - Opened by csoeller over 1 year ago
Labels: bug

#1505 - [BUG] wx._core.wxAssertionError when adding recipe modules

Issue - State: closed - Opened by Yujin-Bao almost 2 years ago - 8 comments
Labels: bug

#1499 - [BUG] Unable to restore layers tab after unpinning on macOS

Issue - State: closed - Opened by zacsimile almost 2 years ago - 3 comments
Labels: bug

#1494 - [BUG] dependency for newish fit _factory does not get built?

Issue - State: open - Opened by csoeller almost 2 years ago
Labels: bug

#1484 - Make image metadata immutable???

Issue - State: open - Opened by David-Baddeley about 2 years ago
Labels: bug

#1466 - [BUG] Can't crop image, then run localization analysis on it

Issue - State: open - Opened by barentine about 2 years ago
Labels: bug

#1435 - [BUG] some issues in unpickling older metadata

Issue - State: closed - Opened by csoeller over 2 years ago - 1 comment
Labels: bug

#1433 - [BUG] (mostly harmless) error when cancelling .csv and .mat file opening in PYMEVis

Issue - State: closed - Opened by csoeller over 2 years ago - 2 comments
Labels: bug

#1426 - [BUG] PYMEImage crosshairs x,y and I display not updating

Issue - State: closed - Opened by barentine over 2 years ago - 6 comments
Labels: bug

#1416 - [BUG] intensity_trace GUI broken

Issue - State: closed - Opened by d-perez-1 over 2 years ago
Labels: bug

#1397 - [BUG] MDHandler error in SKFilter recipe module

Issue - State: closed - Opened by barentine over 2 years ago - 3 comments
Labels: bug

#1393 - [BUG] countdir relative import fails

Issue - State: closed - Opened by barentine over 2 years ago
Labels: bug

#1386 - [BUG] Save Snapshot error

Issue - State: closed - Opened by lukasfue almost 3 years ago - 2 comments
Labels: bug

#1373 - [BUG] DBSCAN seems to be broken

Issue - State: closed - Opened by lukasfue almost 3 years ago - 14 comments
Labels: bug

#1371 - [BUG] LMDisplay module loading from PYMEImage fails

Issue - State: closed - Opened by barentine almost 3 years ago
Labels: bug

#1363 - [Proposal] propagate or log recipe errors in PYMEImage

Issue - State: closed - Opened by barentine almost 3 years ago - 2 comments
Labels: bug

#1361 - [BUG] Numpy version compatibilty / pinning

Issue - State: open - Opened by David-Baddeley almost 3 years ago - 2 comments
Labels: bug

#1353 - [BUG] Recipe run failure kills pipeline, forces restart

Issue - State: open - Opened by zacsimile almost 3 years ago - 1 comment
Labels: bug

#1350 - [BUG] # typo in updated MergeClump module

Issue - State: closed - Opened by csoeller almost 3 years ago - 1 comment
Labels: bug

#1343 - [BUG] Testframe doesn't always draw found localizations

Issue - State: closed - Opened by barentine almost 3 years ago - 1 comment
Labels: bug

#1330 - [BUG] Hitting enter in some parts of PYMEAcquire GUI starts a time series acquisition

Issue - State: closed - Opened by barentine about 3 years ago - 3 comments
Labels: bug

#1328 - [BUG] test_cluster_spooler.py waits for finished() method on HTTPSpoolerv2, which is incomplete

Issue - State: closed - Opened by barentine about 3 years ago - 1 comment
Labels: bug

#1319 - [BUG] Error when open PYMEAcquire

Issue - State: closed - Opened by Yujin-Bao over 3 years ago - 4 comments
Labels: bug

#1318 - [BUG] Make sure current_version.json matches current version

Issue - State: open - Opened by David-Baddeley over 3 years ago
Labels: bug

#1307 - [BUG] --root option doesn't work for PYMEClusterOfOne

Issue - State: closed - Opened by zacsimile over 3 years ago - 2 comments
Labels: bug

#1300 - [BUG] Unable to add new layers

Issue - State: closed - Opened by lukasfue over 3 years ago
Labels: bug

#1299 - [BUG] First layer in two-color datasets has no tab for editing but the data is still visualized

Issue - State: closed - Opened by lukasfue over 3 years ago - 1 comment
Labels: bug

#1298 - [BUG] Measure2D module breaks with latest skimage.measure.regionprops

Issue - State: closed - Opened by csoeller over 3 years ago - 2 comments
Labels: bug

#1295 - [BUG] Can't run simple recipe anymore - issue finding input datasource

Issue - State: closed - Opened by csoeller over 3 years ago - 2 comments
Labels: bug

#1292 - [BUG] Traitsui list editor causes hard crash (segfault)

Issue - State: closed - Opened by David-Baddeley over 3 years ago - 3 comments
Labels: bug

#1285 - [BUG] Save snapshot is broken on OSX with wx 4.1.1

Issue - State: closed - Opened by zacsimile over 3 years ago - 4 comments
Labels: bug

#1282 - [BUG] ueye oddity? StartAq timing & "buffer overflows"

Issue - State: closed - Opened by barentine over 3 years ago - 1 comment
Labels: bug

#1255 - [BUG] Left section is missing in the lasted Mac version of PYMEvis

Issue - State: closed - Opened by ppa007hot over 3 years ago - 7 comments
Labels: bug

#1229 - [BUG] PSF extraction gives erroneous PSF at the end of the image stack

Issue - State: closed - Opened by lukasfue almost 4 years ago - 15 comments
Labels: bug

#1190 - [BUG] PYMEImage crosshair scaling and centering are off

Issue - State: open - Opened by barentine about 4 years ago - 5 comments
Labels: bug

#1179 - [BUG] IDS uEye camera stall-outs when changing settings/acquiring images

Issue - State: closed - Opened by barentine about 4 years ago - 10 comments
Labels: bug

#917 - [BUG] menuinst doesn't work on conda install >=py37

Issue - State: closed - Opened by zacsimile about 5 years ago - 27 comments
Labels: bug, 3rd party

#614 - [BUG] 3D jittered triangulation multiprocessing issue?

Issue - State: closed - Opened by barentine over 5 years ago - 12 comments
Labels: bug

#490 - [BUG] RuleServer counting has potential to get bad if tasks fail/are reassigned

Issue - State: closed - Opened by barentine over 5 years ago - 8 comments
Labels: bug, HT

#150 - Make free space estimate work for cluster spooling

Issue - State: closed - Opened by David-Baddeley about 6 years ago - 5 comments
Labels: bug, minor