Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyro-ppl/numpyro issues and pull requests

#1608 - Add support for local variables in RenyiELBO

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 2 comments
Labels: awaiting review

#1607 - RenyiELBO should respect local latent variables

Issue - State: closed - Opened by fehiepsi over 1 year ago
Labels: enhancement

#1606 - Sampling from `TruncatedNormal` returns infinities when location parameter is outside bounds

Issue - State: closed - Opened by rafaelkaufmann over 1 year ago - 5 comments
Labels: question

#1605 - Docs/stein mixtures

Pull Request - State: closed - Opened by OlaRonning over 1 year ago

#1604 - Assertion error when calling numpyro.sample

Issue - State: closed - Opened by radutanasa over 1 year ago - 3 comments

#1603 - Sample and evaluate independent parameter sets at once

Issue - State: closed - Opened by JR-1991 over 1 year ago - 1 comment

#1602 - Estimate the free parameters of the Q learning model using MCMC inference

Issue - State: closed - Opened by fangzefunny over 1 year ago - 1 comment

#1601 - Stein mixture

Pull Request - State: closed - Opened by OlaRonning over 1 year ago - 2 comments
Labels: awaiting review

#1600 - Fix incorrect unflattenning of inverse transforms

Pull Request - State: closed - Opened by pierreglaser over 1 year ago - 1 comment

#1599 - Updated LocScaleReparam's documentation

Pull Request - State: closed - Opened by Madhav-Kanda over 1 year ago - 1 comment

#1598 - Clarify how to sample the centered parameter in LocScaleReparam

Issue - State: closed - Opened by Madhav-Kanda over 1 year ago - 3 comments
Labels: documentation

#1597 - Bump to version 0.12.1

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment
Labels: awaiting review, easy

#1596 - Version 0.12.0 does not work with jax 4.11

Issue - State: closed - Opened by jnboehm over 1 year ago - 2 comments

#1595 - Fix for jax>=0.4.7

Pull Request - State: closed - Opened by fehiepsi over 1 year ago
Labels: awaiting review

#1594 - distributed log_prob/grad computation with distributed sampling

Issue - State: closed - Opened by dkn16 over 1 year ago - 1 comment
Labels: question

#1593 - Bump to version 0.12.0

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment
Labels: awaiting review, easy

#1592 - Way to change num_samples of MCMC in post predictive check

Issue - State: closed - Opened by t-tetsuya222 over 1 year ago - 2 comments
Labels: question

#1591 - fixed typo in surrogate posterior of beta

Pull Request - State: closed - Opened by BPro2410 over 1 year ago - 2 comments

#1590 - Stein mixtures v2

Pull Request - State: closed - Opened by OlaRonning over 1 year ago - 3 comments
Labels: WIP

#1589 - Do not scale mnist label

Pull Request - State: closed - Opened by fehiepsi over 1 year ago

#1588 - mnist loader should not scale the label

Issue - State: closed - Opened by fehiepsi over 1 year ago
Labels: bug

#1587 - Add support for JAX custom PRNG

Pull Request - State: closed - Opened by jakevdp over 1 year ago

#1586 - Documentation: Typo in Tutorial?

Issue - State: closed - Opened by daikonradish over 1 year ago - 2 comments
Labels: documentation

#1585 - Cannot use dense_mass with overlapping variables

Issue - State: closed - Opened by peterroelants over 1 year ago - 3 comments
Labels: question

#1584 - Include deterministic variables in AutoDelta's sample_posterior

Pull Request - State: closed - Opened by nikmich1 over 1 year ago

#1583 - add forward shape for SimplexToOrderTransform

Pull Request - State: closed - Opened by fehiepsi over 1 year ago

#1582 - Input type for deterministic

Issue - State: closed - Opened by deepers over 1 year ago - 1 comment
Labels: documentation

#1581 - Remove inf's in TruncatedNormal log_prob & sample (#1492)

Pull Request - State: closed - Opened by nikmich1 over 1 year ago

#1580 - a bug in SimplexToOrderedTransform

Issue - State: closed - Opened by yoshida-chem over 1 year ago
Labels: bug

#1579 - Fix broken links in documentation

Pull Request - State: closed - Opened by tare over 1 year ago - 3 comments

#1578 - An error appears if I include the `mask`.

Issue - State: closed - Opened by donga0223 over 1 year ago - 2 comments
Labels: question

#1577 - Support pickling MCMC objects with enumeration

Pull Request - State: closed - Opened by tare over 1 year ago

#1576 - Support pickling MCMC objects that use enumeration for discrete latent variables

Issue - State: closed - Opened by PatNicholson over 1 year ago
Labels: enhancement

#1575 - Jittable transforms

Pull Request - State: closed - Opened by pierreglaser over 1 year ago - 7 comments
Labels: awaiting review

#1574 - Do not mutate shapes of ExpandedDistribution for map-free ops

Pull Request - State: closed - Opened by pierreglaser over 1 year ago
Labels: awaiting review

#1572 - `TraceEnum_ELBO`: Subsample local variables that depend on a global model-enumerated variable

Pull Request - State: open - Opened by ordabayevy over 1 year ago - 5 comments
Labels: WIP

#1571 - Fix the three tutorials affected by \mathcal rendering

Pull Request - State: closed - Opened by theorashid over 1 year ago - 1 comment

#1570 - evaluate numpyro sample during mcmc

Issue - State: closed - Opened by Sarenrenegade over 1 year ago - 2 comments
Labels: question

#1569 - Rendering of mathcal in docs

Issue - State: closed - Opened by theorashid over 1 year ago - 5 comments
Labels: documentation

#1568 - Example: Toy Mixture Model With Discrete Enumeration

Pull Request - State: closed - Opened by ordabayevy over 1 year ago
Labels: awaiting review, Tutorials/Examples

#1567 - Incorrect batch shape of low_rank normal

Issue - State: closed - Opened by xidulu over 1 year ago - 2 comments
Labels: question

#1566 - Model rendering fails

Issue - State: closed - Opened by LeeviLindgren over 1 year ago - 5 comments
Labels: duplicate, question

#1565 - Issue with dist.MultivariateStudentT in Time Series example

Issue - State: closed - Opened by jroberayalas over 1 year ago - 1 comment
Labels: question

#1564 - Add inference utilities to transform between unconstrained and constrained space

Pull Request - State: closed - Opened by aymgal over 1 year ago - 2 comments

#1563 - [FR] Render models to a LaTex formula

Issue - State: open - Opened by ordabayevy over 1 year ago
Labels: enhancement

#1562 - Porting the GMM tutorial

Pull Request - State: closed - Opened by ordabayevy over 1 year ago - 4 comments
Labels: awaiting review, Tutorials/Examples

#1561 - Add `init_params` argument to `svi.init()` and `svi.run()`

Pull Request - State: closed - Opened by ordabayevy over 1 year ago

#1560 - [FR] Run SVI with partial `init_state`

Issue - State: closed - Opened by ordabayevy over 1 year ago - 1 comment
Labels: enhancement

#1559 - Support checking for Multinomial is unnecessarily multidimensional

Issue - State: closed - Opened by aravikumar0 over 1 year ago - 2 comments
Labels: question

#1558 - Allow pickled mcmc object to run post warmup phase

Pull Request - State: closed - Opened by fehiepsi over 1 year ago

#1557 - Allow users to specify total_count_max in Multinomial

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment
Labels: awaiting review

#1556 - total count as model parameter in multinomial distribution

Issue - State: closed - Opened by mahdikooshkbaghi over 1 year ago
Labels: enhancement

#1555 - numpyro.render_model

Issue - State: closed - Opened by srsani over 1 year ago - 1 comment
Labels: question

#1554 - Inverse bjiector transformation (from constrained to unconstrained space)

Issue - State: closed - Opened by aymgal over 1 year ago - 9 comments
Labels: enhancement

#1553 - SVI shared parameter initialization

Pull Request - State: closed - Opened by msegado over 1 year ago - 1 comment

#1552 - [FR] SVI: avoid initializing model params when already specified in guide

Issue - State: closed - Opened by msegado over 1 year ago - 1 comment
Labels: usability

#1551 - Add Gompertz distribution

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment
Labels: awaiting review

#1550 - Add init to mean strategy

Pull Request - State: closed - Opened by fehiepsi over 1 year ago
Labels: awaiting review

#1549 - Clarify how to make predictive in SVI

Pull Request - State: closed - Opened by fehiepsi over 1 year ago
Labels: awaiting review

#1548 - Raise error when using LocScaleReparam for non-real distributions

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment
Labels: awaiting review

#1547 - Respect init params if provided to mcmc.run

Pull Request - State: closed - Opened by fehiepsi over 1 year ago
Labels: awaiting review

#1546 - bump jaxns to >=2.0.1

Pull Request - State: closed - Opened by Joshuaalbert over 1 year ago - 9 comments
Labels: awaiting review

#1544 - Diff for #1529

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 1 comment

#1543 - Fix provenance for jax 0.4.4

Pull Request - State: closed - Opened by fehiepsi over 1 year ago - 11 comments
Labels: awaiting review

#1542 - `NameError: unbound axis name: _provenance` with the latest jax version

Issue - State: closed - Opened by ordabayevy over 1 year ago - 2 comments
Labels: bug, high priority

#1541 - Fix links in the docs

Pull Request - State: closed - Opened by ordabayevy over 1 year ago - 2 comments

#1540 - Memory leak JAXNS sampling

Issue - State: closed - Opened by MauricioGS99 over 1 year ago - 1 comment
Labels: question

#1539 - The initial value of the run function is invalid.

Issue - State: closed - Opened by t-taichi over 1 year ago - 5 comments
Labels: question

#1538 - Wishart distributions?

Issue - State: closed - Opened by saraelshawa almost 2 years ago - 3 comments
Labels: question

#1537 - Properly handle contraction of guide plates in `TraceEnum_ELBO`

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 1 comment
Labels: bug

#1536 - Raise an error if there is no common scale when model enumerated

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 1 comment

#1535 - Remove redundant `if` clause in `replay`

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago
Labels: awaiting review, easy

#1534 - Format repo using the new version of black

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 1 comment

#1533 - Use analytic kl divergence in `TraceEnum_ELBO`

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 8 comments
Labels: awaiting review

#1532 - Mark gaussian shells flaky on CI

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago - 3 comments
Labels: awaiting review, easy

#1531 - Optimize reduction of enumerated guide sites

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 1 comment

#1530 - Refactor infer.elbo file

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago

#1529 - `vmap`-able `Distribution`s

Pull Request - State: closed - Opened by pierreglaser almost 2 years ago - 43 comments

#1528 - Guess max plate nesting

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago
Labels: awaiting review

#1527 - Low effective sample size

Issue - State: closed - Opened by MaAl13 almost 2 years ago - 1 comment
Labels: question

#1526 - Sample an array of variable size

Issue - State: closed - Opened by Sarenrenegade almost 2 years ago - 3 comments
Labels: question

#1525 - Including a stochastic node with fixed parameters in a model

Issue - State: closed - Opened by d-diaz almost 2 years ago - 3 comments

#1524 - Compatibility with windows?

Issue - State: closed - Opened by Sarenrenegade almost 2 years ago - 8 comments
Labels: question

#1523 - LocScaleReparam samples outside the support

Issue - State: closed - Opened by joshryu0425 almost 2 years ago - 1 comment
Labels: warnings & errors

#1522 - Example: Predator-Prey Model gives weird results when using num_chains > 2

Issue - State: closed - Opened by Sangwon91 almost 2 years ago - 2 comments
Labels: question

#1521 - Any way to record the number of gradient call in HMC/NUTS?

Issue - State: closed - Opened by xidulu almost 2 years ago - 2 comments
Labels: question

#1520 - Bump to version 0.11.0

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago - 2 comments
Labels: awaiting review

#1519 - Avoid comparing constraints positive and unit_interval

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago - 1 comment

#1518 - Sampling fails in discrete models

Issue - State: closed - Opened by davidoj almost 2 years ago - 3 comments

#1517 - SBvM consitent with Pyro

Pull Request - State: closed - Opened by OlaRonning almost 2 years ago

#1516 - Attempt to not install dev version of black

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago
Labels: awaiting review

#1515 - Fixed `log_prob` for negative correlation in `SineBivariateVonMises`

Pull Request - State: closed - Opened by OlaRonning almost 2 years ago

#1514 - Add example for distributed log_prob/grad computation

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago - 2 comments
Labels: awaiting review

#1513 - Support jax 0.4

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago
Labels: awaiting review

#1512 - Funsor based `TraceEnum_ELBO` implementation

Pull Request - State: closed - Opened by ordabayevy almost 2 years ago - 1 comment
Labels: awaiting review

#1511 - SineBivariateVonMises generates NaN log probability for negative correlation parameter

Issue - State: closed - Opened by 19MM97 almost 2 years ago - 5 comments
Labels: bug

#1510 - Add test to verify that we get the same distribution under flatten/unflatten logic

Pull Request - State: closed - Opened by fehiepsi almost 2 years ago - 1 comment
Labels: awaiting review, easy

#1507 - Adopt singleton semantics for globally defined constraint instances

Pull Request - State: closed - Opened by pierreglaser almost 2 years ago - 21 comments