Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyro-ppl/numpyro issues and pull requests

#1910 - Merge postprocess_fn into the fori_collect loop

Pull Request - State: open - Opened by fehiepsi 4 days ago
Labels: awaiting review

#1908 - Postprocessing while collecting samples

Issue - State: open - Opened by fehiepsi 5 days ago
Labels: enhancement

#1907 - Add types for contrib.stochastic_support and improve the HSGP module

Pull Request - State: closed - Opened by juanitorduz 5 days ago - 1 comment

#1906 - Proof of Concept: Types and MyPy

Pull Request - State: closed - Opened by juanitorduz 7 days ago - 3 comments

#1905 - Allow to collect nested dict keys in mcmc

Pull Request - State: closed - Opened by fehiepsi 7 days ago
Labels: awaiting review

#1904 - Add Gaussian state space model distribution.

Pull Request - State: closed - Opened by tillahoffmann 7 days ago - 1 comment

#1902 - Allow callable for vectorization over particles on SVI

Pull Request - State: closed - Opened by juanitorduz 9 days ago - 2 comments

#1901 - [BUG] Latent exclude deterministic

Pull Request - State: closed - Opened by juanitorduz 9 days ago

#1899 - Fixed norm const for SBVM

Pull Request - State: closed - Opened by OlaRonning 14 days ago

#1898 - Updated SteinVI docs

Pull Request - State: closed - Opened by OlaRonning 15 days ago - 3 comments

#1897 - Ensure BlockNeuralAutoregressiveTransform maps real->real

Pull Request - State: open - Opened by danielward27 24 days ago - 3 comments
Labels: awaiting response

#1896 - Regarding sampling on discrete variable.

Issue - State: closed - Opened by real-junjiezhang 26 days ago - 4 comments
Labels: question

#1895 - Correct event dimensions for `ReshapeTransform`.

Pull Request - State: closed - Opened by tillahoffmann 27 days ago - 2 comments

#1892 - ci: fix pre-commit

Pull Request - State: closed - Opened by nstarman about 1 month ago

#1891 - build: switch to pyproject.toml

Pull Request - State: open - Opened by nstarman about 1 month ago - 4 comments
Labels: awaiting response

#1890 - Bump CI to python 3.10

Pull Request - State: closed - Opened by fehiepsi about 1 month ago - 4 comments
Labels: awaiting review

#1889 - I cannot use the forum `https://forum.pyro.ai/`

Issue - State: closed - Opened by aleksejs-fomins about 1 month ago - 5 comments
Labels: question

#1888 - build: refactor build infrastructure

Pull Request - State: open - Opened by nstarman about 1 month ago - 5 comments

#1886 - get_model_relations and get_dependencies give UnexpectedTracerError on seeded models

Issue - State: open - Opened by danielward27 about 1 month ago - 1 comment
Labels: documentation

#1885 - Masking a Mixture Model makes `component_` methods unavailable

Issue - State: open - Opened by nstarman about 1 month ago - 5 comments
Labels: question

#1884 - Pyro vs Numpyro NUTS (I can't log in to the pyro forum to ask there.)

Issue - State: closed - Opened by davidJasperForman about 1 month ago - 1 comment

#1883 - Refactoring SteinVI

Pull Request - State: closed - Opened by OlaRonning about 1 month ago - 2 comments

#1882 - remove depreciated line from docs

Pull Request - State: closed - Opened by juanitorduz about 1 month ago - 1 comment

#1881 - Autoregressive or normalizing flow for density estimation

Issue - State: closed - Opened by malihass about 1 month ago - 1 comment
Labels: question

#1880 - feat: add api compat arg to NS.get_samples

Pull Request - State: closed - Opened by nstarman about 1 month ago - 7 comments

#1879 - `get_samples` does not accept kwarg "group_by_chain"

Issue - State: closed - Opened by nstarman about 1 month ago

#1878 - num_parallel_workers is deprecated

Issue - State: closed - Opened by nstarman about 1 month ago - 2 comments

#1877 - use biased autocorrelation estimate by default (resolves #1785)

Pull Request - State: closed - Opened by jonny-so about 1 month ago - 3 comments

#1875 - Evaluating models in Numpyro.

Issue - State: closed - Opened by Claudmj about 2 months ago - 3 comments
Labels: question

#1874 - gh-1870: Refactor `log_prob` method in `_MixtureBase` class to handle `-jnp.inf`

Pull Request - State: closed - Opened by Qazalbash about 2 months ago - 1 comment

#1873 - MCMC + random_flax_module don't work when specifying priors

Issue - State: closed - Opened by sheinkmana about 2 months ago - 2 comments
Labels: question

#1872 - Support constraints.cat and CatTransform

Issue - State: open - Opened by adrn about 2 months ago - 4 comments
Labels: enhancement, good first issue

#1871 - Fixing nested sampling

Pull Request - State: closed - Opened by renecotyfanboy about 2 months ago - 6 comments

#1870 - Grads w.r.t. weights of `MixtureGeneral` Distribution are giving `nan`s

Issue - State: closed - Opened by Qazalbash about 2 months ago - 3 comments
Labels: enhancement

#1868 - jaxns breaking API changes

Issue - State: closed - Opened by renecotyfanboy about 2 months ago - 1 comment
Labels: enhancement

#1867 - Flax BNN is several times slower in JAX 0.4.33 compared to JAX 0.4.31

Issue - State: open - Opened by ziatdinovmax about 2 months ago - 2 comments
Labels: discussion, jax

#1866 - Refactor `validate_args` method on distributions (fixes #1865).

Pull Request - State: closed - Opened by tillahoffmann about 2 months ago

#1865 - Refactor argument validation?

Issue - State: closed - Opened by tillahoffmann about 2 months ago - 1 comment
Labels: enhancement

#1864 - Best practices to use one distribution to define another distribution

Issue - State: open - Opened by Qazalbash about 2 months ago
Labels: question

#1863 - Fix flaky test_change_point_x64

Pull Request - State: closed - Opened by GaetanLepage about 2 months ago - 3 comments

#1862 - test_change_point_x64 failing on aarch64-darwin

Issue - State: closed - Opened by GaetanLepage about 2 months ago - 4 comments

#1861 - Exclude_deterministic argument in Predictive does not apply for models with discrete latents

Issue - State: closed - Opened by fehiepsi about 2 months ago
Labels: bug, good first issue

#1860 - Fix binominal distribution

Pull Request - State: closed - Opened by InfinityMod 2 months ago

#1859 - Fix DiscreteUniform.enumerate_support with non-trivial batch shape

Pull Request - State: closed - Opened by fehiepsi 2 months ago
Labels: awaiting review

#1858 - Bump to 0.15.3

Pull Request - State: closed - Opened by fehiepsi 2 months ago - 1 comment

#1857 - Fix the file path when rendering model

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1856 - Raise error when using CircularReparam at observed site

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1854 - Infer optimizer hyperparameters with NumPyro

Issue - State: closed - Opened by Nimrais 3 months ago - 3 comments

#1851 - Add CodeCov

Issue - State: open - Opened by juanitorduz 3 months ago - 1 comment
Labels: enhancement

#1850 - Update docs to make Predictive behavior more clear

Pull Request - State: closed - Opened by tomwallis 3 months ago - 3 comments
Labels: awaiting response

#1849 - enable progress bar for multi-gpu

Pull Request - State: closed - Opened by andrewdipper 3 months ago

#1848 - expose initialize_model in docs

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1847 - Error when using obs_mask and predictive with different input shape

Issue - State: closed - Opened by felipeangelimvieira 3 months ago - 2 comments
Labels: question

#1846 - Error in model using CircularReparam when trying to use Predictive

Issue - State: closed - Opened by tomwallis 3 months ago - 1 comment
Labels: warnings & errors

#1845 - Predictive: better docs for setting obs to `None`

Issue - State: open - Opened by tomwallis 3 months ago - 4 comments
Labels: documentation

#1844 - Trouble Initializing Parameters with Highly Degenerate Data

Issue - State: closed - Opened by ajamsellem 3 months ago - 1 comment
Labels: question

#1843 - avoids setting jax tracer as lazy property attribute

Pull Request - State: closed - Opened by sbidari 3 months ago - 6 comments

#1842 - NumPyro and Other Samplers Tutorial

Pull Request - State: closed - Opened by juanitorduz 4 months ago - 12 comments

#1841 - [Draft] Enable pmap progress bar with cpu backend / remove deprecated host_callback

Pull Request - State: closed - Opened by andrewdipper 4 months ago - 6 comments
Labels: WIP

#1840 - Bump to 0.15.2

Pull Request - State: closed - Opened by fehiepsi 4 months ago - 1 comment

#1839 - Computing number of gradient evaluations example

Pull Request - State: closed - Opened by andyElking 4 months ago - 4 comments
Labels: awaiting review

#1838 - `nuts.get_extra_fields()["num_steps"]=0` after warmup

Issue - State: closed - Opened by andyElking 4 months ago - 4 comments
Labels: question

#1837 - Simplify the provenance logic to prepare for the removal of jax named shape

Pull Request - State: closed - Opened by fehiepsi 4 months ago - 1 comment
Labels: awaiting review

#1836 - Crash when using `TruncatedNormal` in `parallel` MCMC, but not in `sequential` MCMC

Issue - State: closed - Opened by damonbayer 4 months ago - 5 comments
Labels: enhancement, help wanted

#1835 - Fixing issue Samples are outside the support for DiscreteUniform dist…

Pull Request - State: open - Opened by Deathn0t 4 months ago - 13 comments
Labels: awaiting response

#1834 - Samples are outside the support for DiscreteUniform distribution

Issue - State: open - Opened by Deathn0t 4 months ago - 3 comments
Labels: bug

#1833 - Stress test utility for numpyro?

Issue - State: open - Opened by SamuelBrand1 4 months ago - 2 comments
Labels: enhancement

#1832 - Object oriented wrapper API

Issue - State: closed - Opened by tomwallis 4 months ago - 5 comments

#1831 - saving render_model() output to the desired file path

Issue - State: closed - Opened by znwang25 4 months ago - 5 comments
Labels: bug, help wanted

#1830 - Bump to 0.15.1

Pull Request - State: closed - Opened by fehiepsi 4 months ago - 1 comment

#1829 - Constraints for multiple intervals

Pull Request - State: closed - Opened by Qazalbash 5 months ago - 6 comments
Labels: awaiting review

#1828 - autocorrelation function

Issue - State: closed - Opened by jecampagne 5 months ago - 5 comments

#1827 - Inference for `gaussian_hmm` is broken on latest jax version (0.4.30)

Issue - State: closed - Opened by damonbayer 5 months ago - 1 comment

#1826 - Allow to use NeuTra on models with plates

Pull Request - State: closed - Opened by fehiepsi 5 months ago
Labels: awaiting review

#1825 - Allow for more general chain_method in MCMC

Pull Request - State: closed - Opened by fehiepsi 5 months ago
Labels: awaiting review

#1824 - Support UnpackTransform.inv via pack_fn

Pull Request - State: closed - Opened by fehiepsi 5 months ago
Labels: awaiting review

#1823 - Fixes `random_flax_module` with `flax.linen.BatchNorm`

Pull Request - State: closed - Opened by juanitorduz 5 months ago - 4 comments
Labels: awaiting review

#1822 - Less than eq constaint

Pull Request - State: closed - Opened by Qazalbash 5 months ago - 1 comment

#1821 - Update jax.tree_util.tree_map to jax.tree.map

Pull Request - State: closed - Opened by fehiepsi 5 months ago - 2 comments
Labels: awaiting review

#1820 - Got Problems When Computing Log Likelihoods in a Scan-Based VAR Model

Issue - State: closed - Opened by richardmkit 5 months ago - 2 comments
Labels: question

#1819 - Support vector lengthscales for RBF and Matern kernels

Pull Request - State: closed - Opened by samanklesaria 5 months ago - 9 comments
Labels: awaiting review

#1818 - Convert explicit looping to bit twiddling for nuts u-turn calculations

Pull Request - State: closed - Opened by andrewdipper 5 months ago - 3 comments
Labels: ready-to-merge

#1817 - filter out tests waiting for next tfp release

Pull Request - State: closed - Opened by juanitorduz 5 months ago - 10 comments

#1816 - Make figure in AR2 example reproducible

Pull Request - State: closed - Opened by damonbayer 5 months ago - 5 comments
Labels: ready-to-merge

#1815 - Figure in AR2 example is not reproducible

Issue - State: closed - Opened by damonbayer 5 months ago
Labels: Tutorials/Examples

#1814 - Inference Test Failing

Issue - State: closed - Opened by juanitorduz 5 months ago - 2 comments
Labels: test

#1813 - Large potential energy while using `HMCGibbs` at the initial stage

Issue - State: closed - Opened by disadone 5 months ago - 3 comments
Labels: question

#1812 - How can I gibbs before HMC/NUTS?

Issue - State: closed - Opened by disadone 5 months ago - 8 comments
Labels: enhancement

#1811 - fix(contrib.hsgp): convert matern spectral density from frequency domain

Pull Request - State: closed - Opened by brendancooley 5 months ago - 2 comments

#1810 - [FR] Utility for joint distributions

Issue - State: closed - Opened by Qazalbash 6 months ago - 14 comments
Labels: question

#1809 - An auto guide's `_unpack_latent` and `_unpack_latent._inverse` don't use produce the same order

Issue - State: closed - Opened by CKrawczyk 6 months ago - 1 comment
Labels: bug, enhancement