Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyro-ppl/numpyro issues and pull requests

#1868 - jaxns breaking API changes

Issue - State: open - Opened by renecotyfanboy 6 days ago

#1865 - Refactor argument validation?

Issue - State: closed - Opened by tillahoffmann 8 days ago - 1 comment
Labels: enhancement

#1864 - Best practices to use one distribution to define another distribution

Issue - State: open - Opened by Qazalbash 9 days ago
Labels: question

#1863 - Fix flaky test_change_point_x64

Pull Request - State: closed - Opened by GaetanLepage 10 days ago - 3 comments

#1862 - test_change_point_x64 failing on aarch64-darwin

Issue - State: closed - Opened by GaetanLepage 10 days ago - 4 comments

#1861 - Exclude_deterministic argument in Predictive does not apply for models with discrete latents

Issue - State: open - Opened by fehiepsi 10 days ago
Labels: bug, good first issue

#1860 - Fix binominal distribution

Pull Request - State: closed - Opened by InfinityMod 21 days ago

#1859 - Fix DiscreteUniform.enumerate_support with non-trivial batch shape

Pull Request - State: closed - Opened by fehiepsi 26 days ago
Labels: awaiting review

#1858 - Bump to 0.15.3

Pull Request - State: closed - Opened by fehiepsi 26 days ago - 1 comment

#1857 - Fix the file path when rendering model

Pull Request - State: closed - Opened by fehiepsi about 1 month ago
Labels: awaiting review

#1856 - Raise error when using CircularReparam at observed site

Pull Request - State: closed - Opened by fehiepsi about 1 month ago
Labels: awaiting review

#1854 - Infer optimizer hyperparameters with NumPyro

Issue - State: closed - Opened by Nimrais about 1 month ago - 3 comments

#1852 - Resolve numerical instability in entropy of `GeometricLogits`.

Pull Request - State: closed - Opened by tillahoffmann about 1 month ago

#1851 - Add CodeCov

Issue - State: open - Opened by juanitorduz about 1 month ago - 1 comment
Labels: enhancement

#1850 - Update docs to make Predictive behavior more clear

Pull Request - State: closed - Opened by tomwallis about 2 months ago - 3 comments
Labels: awaiting response

#1849 - enable progress bar for multi-gpu

Pull Request - State: closed - Opened by andrewdipper about 2 months ago

#1848 - expose initialize_model in docs

Pull Request - State: closed - Opened by fehiepsi about 2 months ago
Labels: awaiting review

#1847 - Error when using obs_mask and predictive with different input shape

Issue - State: closed - Opened by felipeangelimvieira about 2 months ago - 2 comments
Labels: question

#1846 - Error in model using CircularReparam when trying to use Predictive

Issue - State: closed - Opened by tomwallis about 2 months ago - 1 comment
Labels: warnings & errors

#1845 - Predictive: better docs for setting obs to `None`

Issue - State: open - Opened by tomwallis about 2 months ago - 4 comments
Labels: documentation

#1844 - Trouble Initializing Parameters with Highly Degenerate Data

Issue - State: closed - Opened by ajamsellem about 2 months ago - 1 comment
Labels: question

#1843 - avoids setting jax tracer as lazy property attribute

Pull Request - State: closed - Opened by sbidari about 2 months ago - 6 comments

#1842 - NumPyro and Other Samplers Tutorial

Pull Request - State: closed - Opened by juanitorduz about 2 months ago - 12 comments

#1841 - [Draft] Enable pmap progress bar with cpu backend / remove deprecated host_callback

Pull Request - State: closed - Opened by andrewdipper about 2 months ago - 6 comments
Labels: WIP

#1840 - Bump to 0.15.2

Pull Request - State: closed - Opened by fehiepsi 2 months ago - 1 comment

#1839 - Computing number of gradient evaluations example

Pull Request - State: closed - Opened by andyElking 2 months ago - 4 comments
Labels: awaiting review

#1838 - `nuts.get_extra_fields()["num_steps"]=0` after warmup

Issue - State: closed - Opened by andyElking 2 months ago - 4 comments
Labels: question

#1837 - Simplify the provenance logic to prepare for the removal of jax named shape

Pull Request - State: closed - Opened by fehiepsi 2 months ago - 1 comment
Labels: awaiting review

#1836 - Crash when using `TruncatedNormal` in `parallel` MCMC, but not in `sequential` MCMC

Issue - State: closed - Opened by damonbayer 2 months ago - 5 comments
Labels: enhancement, help wanted

#1835 - Fixing issue Samples are outside the support for DiscreteUniform dist…

Pull Request - State: open - Opened by Deathn0t 2 months ago - 13 comments
Labels: awaiting response

#1834 - Samples are outside the support for DiscreteUniform distribution

Issue - State: open - Opened by Deathn0t 2 months ago - 3 comments
Labels: bug

#1833 - Stress test utility for numpyro?

Issue - State: open - Opened by SamuelBrand1 3 months ago - 2 comments
Labels: enhancement

#1832 - Object oriented wrapper API

Issue - State: closed - Opened by tomwallis 3 months ago - 5 comments

#1831 - saving render_model() output to the desired file path

Issue - State: closed - Opened by znwang25 3 months ago - 5 comments
Labels: bug, help wanted

#1830 - Bump to 0.15.1

Pull Request - State: closed - Opened by fehiepsi 3 months ago - 1 comment

#1829 - Constraints for multiple intervals

Pull Request - State: closed - Opened by Qazalbash 3 months ago - 6 comments
Labels: awaiting review

#1828 - autocorrelation function

Issue - State: closed - Opened by jecampagne 3 months ago - 5 comments

#1827 - Inference for `gaussian_hmm` is broken on latest jax version (0.4.30)

Issue - State: closed - Opened by damonbayer 3 months ago - 1 comment

#1826 - Allow to use NeuTra on models with plates

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1825 - Allow for more general chain_method in MCMC

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1824 - Support UnpackTransform.inv via pack_fn

Pull Request - State: closed - Opened by fehiepsi 3 months ago
Labels: awaiting review

#1823 - Fixes `random_flax_module` with `flax.linen.BatchNorm`

Pull Request - State: closed - Opened by juanitorduz 3 months ago - 4 comments
Labels: awaiting review

#1822 - Less than eq constaint

Pull Request - State: closed - Opened by Qazalbash 3 months ago - 1 comment

#1821 - Update jax.tree_util.tree_map to jax.tree.map

Pull Request - State: closed - Opened by fehiepsi 3 months ago - 2 comments
Labels: awaiting review

#1820 - Got Problems When Computing Log Likelihoods in a Scan-Based VAR Model

Issue - State: closed - Opened by richardmkit 3 months ago - 2 comments
Labels: question

#1819 - Support vector lengthscales for RBF and Matern kernels

Pull Request - State: closed - Opened by samanklesaria 3 months ago - 9 comments
Labels: awaiting review

#1818 - Convert explicit looping to bit twiddling for nuts u-turn calculations

Pull Request - State: closed - Opened by andrewdipper 3 months ago - 3 comments
Labels: ready-to-merge

#1817 - filter out tests waiting for next tfp release

Pull Request - State: closed - Opened by juanitorduz 3 months ago - 10 comments

#1816 - Make figure in AR2 example reproducible

Pull Request - State: closed - Opened by damonbayer 4 months ago - 5 comments
Labels: ready-to-merge

#1815 - Figure in AR2 example is not reproducible

Issue - State: closed - Opened by damonbayer 4 months ago
Labels: Tutorials/Examples

#1814 - Inference Test Failing

Issue - State: closed - Opened by juanitorduz 4 months ago - 2 comments
Labels: test

#1813 - Large potential energy while using `HMCGibbs` at the initial stage

Issue - State: closed - Opened by disadone 4 months ago - 3 comments
Labels: question

#1812 - How can I gibbs before HMC/NUTS?

Issue - State: closed - Opened by disadone 4 months ago - 8 comments
Labels: enhancement

#1811 - fix(contrib.hsgp): convert matern spectral density from frequency domain

Pull Request - State: closed - Opened by brendancooley 4 months ago - 2 comments

#1810 - [FR] Utility for joint distributions

Issue - State: closed - Opened by Qazalbash 4 months ago - 14 comments
Labels: question

#1809 - An auto guide's `_unpack_latent` and `_unpack_latent._inverse` don't use produce the same order

Issue - State: closed - Opened by CKrawczyk 4 months ago - 1 comment
Labels: bug, enhancement

#1808 - fix(contrib.hsgp): fix incorrect dim arg to partial spectral density fns

Pull Request - State: closed - Opened by brendancooley 4 months ago - 1 comment

#1807 - gh-1806: Implementation of Doubly Truncated Power Law and Lower Truncated Power Law

Pull Request - State: closed - Opened by Qazalbash 4 months ago - 27 comments
Labels: awaiting review

#1806 - [FR] Truncated Power Law distribution

Issue - State: closed - Opened by Qazalbash 4 months ago
Labels: enhancement

#1805 - contrib.hsgp: support vector-valued kernel hyperparameters

Issue - State: closed - Opened by brendancooley 4 months ago - 3 comments
Labels: enhancement

#1804 - Add Pareto Smoothed Importance Sampling (PSIS) diagnostic method

Issue - State: open - Opened by asmuzsoy 4 months ago - 4 comments
Labels: enhancement

#1803 - Support multidimensional HSGP (numpyro.contrib.hsgp)

Pull Request - State: closed - Opened by brendancooley 4 months ago - 10 comments

#1802 - Memory reduction fixes for MCMC sampler

Pull Request - State: closed - Opened by andrewdipper 4 months ago - 4 comments
Labels: awaiting review

#1801 - example: multidimensional HSGP

Pull Request - State: closed - Opened by brendancooley 5 months ago - 20 comments
Labels: awaiting review

#1800 - Add further entropy implementations.

Pull Request - State: closed - Opened by tillahoffmann 5 months ago

#1799 - Add images to tutorial gallery

Pull Request - State: closed - Opened by juanitorduz 5 months ago

#1798 - Fix typo at publish workflow that triggers the upload many times

Pull Request - State: closed - Opened by fehiepsi 5 months ago
Labels: awaiting review, easy

#1797 - Bump to 0.15.0

Pull Request - State: closed - Opened by fehiepsi 5 months ago - 1 comment
Labels: awaiting review

#1796 - Add a note that Trace_EnumELBO does not work with AutoContinuous

Pull Request - State: closed - Opened by fehiepsi 5 months ago
Labels: awaiting review

#1795 - Updat .pre-commit hook version

Pull Request - State: closed - Opened by juanitorduz 5 months ago - 8 comments
Labels: awaiting review

#1794 - Add HSGP contribution module

Pull Request - State: closed - Opened by juanitorduz 5 months ago - 6 comments
Labels: awaiting review

#1792 - fix singleton plate bug

Pull Request - State: closed - Opened by amifalk 5 months ago

#1791 - Different supports in component distributions for mixture models

Pull Request - State: closed - Opened by Qazalbash 5 months ago - 3 comments
Labels: awaiting review

#1790 - sample from distribution without storing

Pull Request - State: closed - Opened by amifalk 5 months ago

#1789 - Predictive fix when deterministic sites are present

Pull Request - State: closed - Opened by kylejcaron 5 months ago

#1788 - HSGP utility functions in the `contrib` module?

Issue - State: closed - Opened by juanitorduz 5 months ago - 2 comments
Labels: enhancement

#1787 - Add entropy implementations.

Pull Request - State: closed - Opened by tillahoffmann 5 months ago - 1 comment
Labels: awaiting review

#1786 - mean_accept_prob significantly different after warmup

Issue - State: open - Opened by jonny-so 5 months ago - 8 comments
Labels: enhancement, help wanted

#1785 - Use biased autocorrelation estimate by default

Issue - State: open - Opened by jonny-so 5 months ago - 1 comment
Labels: enhancement, help wanted

#1784 - Relax check of positive definite constraint.

Pull Request - State: closed - Opened by tillahoffmann 6 months ago - 1 comment

#1783 - Fix image sizes censoring notebook

Pull Request - State: closed - Opened by juanitorduz 6 months ago - 2 comments

#1782 - Move nested sampling docs to contrib

Pull Request - State: closed - Opened by fehiepsi 6 months ago
Labels: awaiting review

#1781 - ImportError: cannot import name 'CAR' from "numpyro.distrubutions.continuous'

Issue - State: closed - Opened by ttakayaflexpower 6 months ago - 2 comments
Labels: question

#1780 - [FR] Support for different supports in component distributions for mixture models

Issue - State: closed - Opened by Qazalbash 6 months ago - 5 comments
Labels: enhancement

#1779 - Add Wishart distribution.

Pull Request - State: closed - Opened by tillahoffmann 6 months ago
Labels: awaiting review

#1778 - Do not unflatten unevaluated lazy properties.

Pull Request - State: closed - Opened by tillahoffmann 6 months ago - 3 comments

#1777 - Allow to use Delta on numpy arrays without moving them to jax devices

Pull Request - State: closed - Opened by fehiepsi 6 months ago - 2 comments
Labels: awaiting review

#1776 - Avoid unnecessary reshape for trivial expand

Pull Request - State: closed - Opened by fehiepsi 6 months ago - 1 comment
Labels: awaiting review

#1775 - Remove the deprecated import jax.tree_map

Pull Request - State: closed - Opened by fehiepsi 6 months ago
Labels: awaiting review

#1774 - Fix ensemble mcmc multiple run

Pull Request - State: closed - Opened by amifalk 6 months ago - 1 comment

#1773 - Censoring example notebook

Pull Request - State: closed - Opened by juanitorduz 6 months ago - 10 comments

#1772 - numpyro.deterministic static on infer.Predictive

Issue - State: closed - Opened by AkiroSR 6 months ago - 13 comments
Labels: question

#1771 - Censoring Example

Issue - State: closed - Opened by juanitorduz 6 months ago - 1 comment
Labels: Tutorials/Examples

#1770 - Verify result of `biject_to` satisfies the constraint.

Pull Request - State: closed - Opened by tillahoffmann 6 months ago

#1769 - fixed lint for #1760

Pull Request - State: closed - Opened by OlaRonning 6 months ago