Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyro-kinetics/pyrokinetics issues and pull requests

#407 - Account for correct k_perp calc

Pull Request - State: closed - Opened by bpatel2107 18 days ago - 1 comment

#406 - Release 0.7.1

Issue - State: open - Opened by bpatel2107 18 days ago

#405 - line missing in read_eq_prof.rst

Issue - State: closed - Opened by DanHarJor 19 days ago - 9 comments

#404 - Add option to handle loading in adiabatic electrons in GS2/STELLA

Pull Request - State: open - Opened by bpatel2107 21 days ago - 2 comments

#403 - Runs with adiabatic electrons not supported

Issue - State: closed - Opened by physycola 21 days ago - 3 comments

#402 - Saturation rules - KBM MG rule

Pull Request - State: closed - Opened by bpatel2107 21 days ago - 1 comment

#401 - Limit xarray version for time being.

Pull Request - State: closed - Opened by d7919 26 days ago

#400 - Pyro to IMAS roundtrip tests failing for TGLF case

Issue - State: closed - Opened by d7919 26 days ago - 5 comments

#399 - Minor/find gs2 species type without reading the input data

Pull Request - State: closed - Opened by d7919 26 days ago

#398 - Draft : Start to add MXH treatment for GS2

Pull Request - State: open - Opened by d7919 27 days ago - 2 comments

#397 - OSSFE 2025 conference abstract

Issue - State: open - Opened by bpatel2107 about 1 month ago

#396 - Pin numpy to <2.1 and remove some warnings with numpy>=2.0

Pull Request - State: closed - Opened by bpatel2107 about 2 months ago - 1 comment

#395 - Bicoherence diagnostics

Pull Request - State: closed - Opened by bpatel2107 about 2 months ago - 1 comment

#394 - Check for GENE precision in output

Pull Request - State: closed - Opened by bpatel2107 3 months ago

#393 - Add in deuterium mass if not in Kinetics object - Fast and Furious edition

Pull Request - State: closed - Opened by bpatel2107 3 months ago - 2 comments

#392 - changed np.isclose() to np.allclose() for calculating normed gradients

Pull Request - State: open - Opened by rijudutta 3 months ago - 3 comments

#391 - Code coverage reports failing

Issue - State: closed - Opened by LiamPattinson 4 months ago - 1 comment

#390 - Enhancements/add gk output data

Pull Request - State: closed - Opened by bpatel2107 4 months ago - 1 comment

#389 - Routines to compute field line displacement and correlation length

Pull Request - State: open - Opened by mgiacomin 4 months ago - 4 comments

#388 - Enhancements/gene magn geometry reader

Pull Request - State: closed - Opened by bpatel2107 4 months ago - 1 comment

#387 - Fix for FreeQDSK 0.5 breaking changes

Pull Request - State: closed - Opened by LiamPattinson 5 months ago

#386 - Freeqdsk v0.5.0 breaking automatic GEQDSK file type determination

Issue - State: closed - Opened by spmarsden 5 months ago - 2 comments

#384 - Use explicit `__init__` for `LocalGeometry`

Pull Request - State: open - Opened by LiamPattinson 5 months ago - 5 comments

#383 - IMAS Equilibrium/Kinetics Reader

Pull Request - State: closed - Opened by bpatel2107 5 months ago - 3 comments

#382 - GENE IMAS fixes

Pull Request - State: closed - Opened by bpatel2107 6 months ago - 1 comment

#381 - Problems with GENE when only ExBrate is specified in external_contr

Issue - State: closed - Opened by venkiteshayyar 6 months ago - 3 comments

#380 - Add check for new position of rhostar in cgyro output

Pull Request - State: closed - Opened by bpatel2107 6 months ago - 2 comments

#379 - Bugfix/gk output field coord

Pull Request - State: closed - Opened by bpatel2107 6 months ago - 1 comment

#377 - Support loading CGYRO simulations run off input.gacode

Issue - State: open - Opened by cholland 6 months ago - 7 comments

#375 - Add default in ky from tglf get_numerics

Pull Request - State: closed - Opened by bpatel2107 7 months ago

#374 - Update to loop over all wavenumber/eigenmode and get fluxes/field to …

Pull Request - State: closed - Opened by bpatel2107 7 months ago - 1 comment

#373 - Switch TGLF to use MillerTurnbull

Pull Request - State: closed - Opened by bpatel2107 7 months ago - 1 comment

#372 - Numpy 2.0 Compatibility

Pull Request - State: closed - Opened by LiamPattinson 8 months ago - 13 comments

#371 - Set default norm convention when reading IDS GKOutput and add test

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 1 comment

#370 - Enhancements/gene fourier reading

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 1 comment

#369 - NumPy 2.0 Compatibility

Issue - State: closed - Opened by LiamPattinson 8 months ago

#368 - Switch to `ruff` for formatting/linting?

Issue - State: open - Opened by LiamPattinson 8 months ago - 3 comments
Labels: enhancement

#367 - pyro to ids failing for tglf template files

Issue - State: open - Opened by hgd511 8 months ago - 1 comment

#366 - Remove extra species namelist from inputs when removed

Pull Request - State: closed - Opened by bpatel2107 8 months ago

#365 - Add method to enforce quasineutrality in LocalSpecies

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 3 comments

#364 - Direct matching of linear GKOutput between codes

Pull Request - State: open - Opened by bpatel2107 8 months ago - 7 comments

#363 - Demo: Immutable normalisations

Pull Request - State: open - Opened by LiamPattinson 8 months ago

#362 - Add check for box_size when no kx is set with a test.

Pull Request - State: closed - Opened by bpatel2107 8 months ago

#361 - Add units to eigenfunctions when loaded manually

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 2 comments

#360 - pyro_to_imas_mapping function failing for cgyro run

Issue - State: closed - Opened by jmcclena 8 months ago - 1 comment

#359 - Feature/gene trpeps geometry file

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 5 comments

#358 - Bugfix: Pin `idspy-dictionaries` version

Pull Request - State: closed - Opened by LiamPattinson 8 months ago - 1 comment

#357 - Bugfix: unit conversions using simulation units

Pull Request - State: closed - Opened by LiamPattinson 8 months ago - 1 comment

#356 - Why is beta_star_scale /= 1 when input.cgyro generated from .pfile?

Issue - State: closed - Opened by mrhardman 8 months ago - 1 comment

#355 - Use correct variable for fast ion nucleon

Pull Request - State: closed - Opened by bpatel2107 8 months ago - 2 comments

#354 - Bugs installing pyro

Issue - State: closed - Opened by mrhardman 8 months ago - 9 comments

#353 - Bugs reading pFile (#1)

Issue - State: closed - Opened by mrhardman 8 months ago - 1 comment

#352 - correct nperiod calculation from nx0

Pull Request - State: open - Opened by arkabokshi 8 months ago - 2 comments
Labels: bug

#351 - Adding documentation for synthetic highk/dbs

Pull Request - State: closed - Opened by juanruizruiz 9 months ago

#350 - Update README.md

Pull Request - State: closed - Opened by bpatel2107 9 months ago - 1 comment

#349 - Installation of pyrokinetics seems to require Python version > 3.8

Issue - State: closed - Opened by mrhardman 9 months ago - 1 comment

#348 - Add correct mass factor in rhoref scaling

Pull Request - State: closed - Opened by bpatel2107 9 months ago

#346 - Update bunit calculation to use analytic solution

Pull Request - State: closed - Opened by bpatel2107 9 months ago - 5 comments

#345 - Unpin scipy

Pull Request - State: closed - Opened by ZedThree 9 months ago - 14 comments

#344 - Choice of ky definition in Numerics

Issue - State: open - Opened by bpatel2107 9 months ago - 7 comments
Labels: help wanted

#343 - Add in reader for nrg in h5 format

Pull Request - State: closed - Opened by bpatel2107 9 months ago - 1 comment

#341 - Bugfix/eigenfunction amp

Pull Request - State: closed - Opened by bpatel2107 9 months ago - 2 comments

#340 - Update publishing workflow

Pull Request - State: closed - Opened by LiamPattinson 9 months ago - 6 comments

#339 - Bugfix/gene dpdx pm sign

Pull Request - State: closed - Opened by bpatel2107 9 months ago

#338 - GK code stella input file conversion feature

Pull Request - State: closed - Opened by mrhardman 9 months ago - 6 comments

#337 - Inconsistent units across multiple simulations

Issue - State: open - Opened by LiamPattinson 9 months ago

#335 - Feature request: Clever Ion naming

Issue - State: open - Opened by bpatel2107 9 months ago - 10 comments

#334 - can not create ids with no normalizations for certain cgyro runs.

Issue - State: closed - Opened by jmcclena 9 months ago - 6 comments

#332 - Bugfix/eigenvalues units

Pull Request - State: closed - Opened by bpatel2107 9 months ago - 4 comments

#330 - pyro_to_ids fails when outside of pyrokinetics directory

Issue - State: closed - Opened by jmcclena 9 months ago - 5 comments

#329 - Add MXH to GENE

Pull Request - State: closed - Opened by bpatel2107 9 months ago

#328 - Bugfix: Slow deepcopies in tests

Pull Request - State: closed - Opened by LiamPattinson 9 months ago - 2 comments

#327 - Cache file reads in tests

Pull Request - State: closed - Opened by LiamPattinson 9 months ago

#326 - Tests taking a very long time

Issue - State: open - Opened by LiamPattinson 10 months ago - 8 comments

#325 - Enhancements/add gkw v2

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 4 comments

#324 - Set up reading ky from n0 in gs2 input file

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 15 comments

#323 - Check if LocalGeometry has pressure and set accordingly. Remove unnec…

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 1 comment

#322 - Second beta namelist parameter in gs2 input file on convert

Issue - State: closed - Opened by jfparisi 10 months ago - 2 comments

#321 - Ignore CGYRO squareness in convert to GS2

Issue - State: open - Opened by jfparisi 10 months ago - 9 comments
Labels: bug

#320 - Beta units in pyrokinetics

Issue - State: open - Opened by bpatel2107 10 months ago

#319 - Load in tracer_efit as "circular" LocalGeometry with q and shat

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 1 comment

#317 - Wrong symbol used in elementary_charge defintion

Issue - State: closed - Opened by pfbuxton 10 months ago - 5 comments

#316 - v0.6.2 release

Issue - State: open - Opened by bpatel2107 10 months ago - 5 comments
Labels: release

#315 - update how ions are named

Pull Request - State: closed - Opened by arkabokshi 10 months ago - 7 comments

#314 - Add tutorial for using Pyrokinetics on HPC systems

Pull Request - State: closed - Opened by LiamPattinson 10 months ago - 4 comments

#313 - Make more useful missing file error JETTO kinetics

Pull Request - State: closed - Opened by bpatel2107 10 months ago

#312 - GENE collision normalization potential bug

Issue - State: closed - Opened by arkabokshi 10 months ago - 1 comment
Labels: bug

#311 - Enhancements/auto detect normalisations

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 5 comments
Labels: enhancement

#310 - Enhancements/clean documentation

Pull Request - State: closed - Opened by arkabokshi 10 months ago - 3 comments

#309 - Fix NaN check for arrays and normalise to final finite timeslice in f…

Pull Request - State: closed - Opened by bpatel2107 10 months ago - 1 comment

#307 - Write bespoke GACODE reader to avoid pygacode import

Pull Request - State: closed - Opened by bpatel2107 11 months ago - 1 comment