Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pymmcore-plus/napari-micromanager issues and pull requests

#336 - ci: fixing tests, drop py38

Pull Request - State: closed - Opened by tlambert03 2 days ago - 2 comments

#335 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 28 days ago - 1 comment

#334 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 months ago - 2 comments

#333 - [WIP] feat: add support for Micro-Manager Multi Camera utilities

Pull Request - State: open - Opened by fdrgsp 2 months ago - 1 comment

#332 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago - 1 comment

#331 - chore: Update question templates

Pull Request - State: closed - Opened by tlambert03 4 months ago

#330 - chore: Update issue templates

Pull Request - State: closed - Opened by tlambert03 4 months ago - 1 comment

#329 - fix: Prevent lots of 'circular buffer empty' errors in MM

Pull Request - State: closed - Opened by rixius 4 months ago - 7 comments

#328 - Error logged when circular buffer is empty

Issue - State: closed - Opened by rixius 4 months ago - 6 comments

#326 - docs: Update README.md with new image

Pull Request - State: closed - Opened by tlambert03 4 months ago

#325 - docs: update image in docs

Pull Request - State: closed - Opened by fdrgsp 4 months ago - 3 comments

#324 - ci(dependabot): bump softprops/action-gh-release from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#323 - feat: dialog to select config at startup + store configs paths

Pull Request - State: open - Opened by fdrgsp 4 months ago - 1 comment

#322 - docs: add basic docs page

Pull Request - State: closed - Opened by tlambert03 4 months ago - 1 comment

#321 - ci: use `mmcore build-dev` for linux, cache result

Pull Request - State: closed - Opened by tlambert03 4 months ago - 1 comment

#320 - Bug-in-waiting: picking layer names

Issue - State: open - Opened by tlambert03 4 months ago

#319 - chore: use ruff-format instead of black

Pull Request - State: closed - Opened by tlambert03 4 months ago - 1 comment

#318 - fix: fix when passing a config file in the command line

Pull Request - State: closed - Opened by fdrgsp 4 months ago - 1 comment

#317 - feat: restore the last napari-micromanager layout at startup

Pull Request - State: open - Opened by fdrgsp 4 months ago - 1 comment

#316 - Data not saving correctly

Issue - State: open - Opened by swmercer34 4 months ago - 3 comments
Labels: awaiting response

#315 - feat: remove save logic and use pymmcore-plus writer from MDAWidget

Pull Request - State: closed - Opened by fdrgsp 4 months ago - 6 comments

#314 - fix: prevent preview update when mda is running

Pull Request - State: closed - Opened by fdrgsp 5 months ago - 1 comment

#313 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago - 1 comment

#312 - ci(dependabot): bump codecov/codecov-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies

#311 - test: small fix to test

Pull Request - State: closed - Opened by tlambert03 5 months ago - 1 comment

#310 - fix: fix error when loading SequenceMeta as dict

Pull Request - State: closed - Opened by fdrgsp 5 months ago - 2 comments

#309 - [WIP] fix: fix lag in live mode after mda acquisition

Pull Request - State: closed - Opened by fdrgsp 5 months ago - 2 comments

#308 - Show output from any pymmcore-plus MDA in napari viewer

Pull Request - State: closed - Opened by tlambert03 5 months ago - 1 comment

#307 - fix: fix zarr dtype

Pull Request - State: closed - Opened by fdrgsp 5 months ago - 2 comments

#306 - feat: add `mmcore` to viewer console namespace

Pull Request - State: closed - Opened by tlambert03 5 months ago - 1 comment
Labels: enhancement

#304 - docs: Update README.md

Pull Request - State: closed - Opened by tlambert03 5 months ago

#303 - Hardware autofocus implementation

Issue - State: closed - Opened by GabeK-L 6 months ago - 4 comments

#302 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#301 - ci(dependabot): bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies

#300 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago - 1 comment

#299 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago - 1 comment

#298 - tests: don't use global instance in layer_scale test

Pull Request - State: closed - Opened by tlambert03 8 months ago - 1 comment

#296 - How to connect to ASI Stage on Linux

Issue - State: closed - Opened by nkhmicrographia 9 months ago - 3 comments

#294 - question regarding "on-the-fly" processing

Issue - State: closed - Opened by tlambert03 9 months ago - 3 comments
Labels: question

#293 - Couldn't open MDA, issue with MDA QWidget

Issue - State: closed - Opened by raulbola 9 months ago - 8 comments

#292 - feat: use new pymmcore-widgets useq-widget

Pull Request - State: closed - Opened by fdrgsp 9 months ago - 2 comments

#291 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 9 months ago - 1 comment

#290 - fix: ObjectivesToolBar

Pull Request - State: closed - Opened by fdrgsp 9 months ago - 1 comment

#289 - Feature request - Add "Keep shutter open" option for z-stack

Issue - State: open - Opened by GabeK-L 9 months ago - 3 comments

#288 - Error with Nikon Ti

Issue - State: closed - Opened by ReddysLab 9 months ago - 16 comments

#287 - Embedding live image to QT window

Issue - State: closed - Opened by mshnschnko 10 months ago - 2 comments

#286 - AttributeError: 'method-wrapper' object has no attribute '__module__'

Issue - State: closed - Opened by mshnschnko 10 months ago - 2 comments

#285 - ci(dependabot): bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 1 comment
Labels: dependencies

#284 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 10 months ago - 1 comment

#283 - test: support py3.11

Pull Request - State: closed - Opened by tlambert03 10 months ago - 1 comment

#282 - ci: cancel in-progress ci

Pull Request - State: closed - Opened by tlambert03 10 months ago - 1 comment

#281 - refactor: changing toolbar structure

Pull Request - State: closed - Opened by tlambert03 10 months ago - 2 comments
Labels: refactor

#280 - fix: fix recursion on event filter

Pull Request - State: closed - Opened by tlambert03 10 months ago - 10 comments
Labels: bug

#279 - napari-micromanager crashing napari on python 3.11

Issue - State: closed - Opened by ptbrown1729 10 months ago - 9 comments

#278 - build: bump superqt

Pull Request - State: closed - Opened by tlambert03 11 months ago - 1 comment

#277 - test: change main_window_mda test

Pull Request - State: closed - Opened by tlambert03 11 months ago - 1 comment

#275 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 11 months ago - 1 comment

#274 - fix: minor fix IlluminationWidget

Pull Request - State: closed - Opened by fdrgsp 11 months ago - 1 comment

#273 - fix: remove explorer stuff

Pull Request - State: closed - Opened by fdrgsp 11 months ago - 1 comment

#272 - feat: Update thread to write to mda zarr

Pull Request - State: closed - Opened by fdrgsp 11 months ago - 3 comments

#271 - build: bump dependency pins

Pull Request - State: closed - Opened by tlambert03 11 months ago - 1 comment

#269 - fix: use widget from pymmcore-widgets main branch

Pull Request - State: closed - Opened by fdrgsp 11 months ago - 4 comments

#268 - bug: mda widget broken on latest pymmcore-widgets

Issue - State: closed - Opened by ianhi 11 months ago - 1 comment

#267 - fix: fix pre-commit

Pull Request - State: closed - Opened by tlambert03 11 months ago - 1 comment

#266 - fix: remove defunct sample explorer

Pull Request - State: closed - Opened by ianhi 11 months ago - 3 comments

#265 - fix: remove defunct sample explorer

Pull Request - State: closed - Opened by ianhi 11 months ago - 2 comments

#264 - feat: Update thread to write to mda zarr

Pull Request - State: closed - Opened by fdrgsp 12 months ago - 5 comments

#262 - chore: update pre-commit

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment

#261 - Bug: More issues with `event_filter`

Issue - State: closed - Opened by ianhi about 1 year ago - 11 comments

#260 - test: update explorer tests to unbreak them

Pull Request - State: closed - Opened by ianhi about 1 year ago - 1 comment

#259 - fix: don't leave scale undefined

Pull Request - State: closed - Opened by ianhi over 1 year ago - 2 comments

#258 - feat: use another thread to write to mda zarr

Pull Request - State: closed - Opened by ianhi over 1 year ago - 7 comments

#257 - feat: Allow passing a config from command line

Pull Request - State: closed - Opened by ianhi over 1 year ago - 7 comments

#256 - Performance: Extra thread to do `io` during MDA

Issue - State: closed - Opened by ianhi over 1 year ago - 1 comment

#255 - toolbar and mda window loads too wide

Issue - State: closed - Opened by tlambert03 over 1 year ago
Labels: bug

#254 - fix: fix warning on private access

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 2 comments

#253 - ENH: Auto populate the napari terminal with `mmc`

Issue - State: closed - Opened by ianhi over 1 year ago
Labels: enhancement, good first issue

#252 - Allow taking config file as command line argument

Issue - State: closed - Opened by ianhi over 1 year ago

#251 - temp zarr file for MDA can overwhelm space on hard drive

Issue - State: closed - Opened by ianhi over 1 year ago - 3 comments
Labels: awaiting response

#250 - Loading two differnet configs causes errors

Issue - State: closed - Opened by ianhi over 1 year ago - 1 comment
Labels: bug, high priority

#249 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment

#248 - fix: fix _close_btn + add toolbar new line + propbrowser floating

Pull Request - State: closed - Opened by fdrgsp over 1 year ago - 1 comment

#247 - fix: update explorer + fix tests

Pull Request - State: closed - Opened by fdrgsp over 1 year ago - 1 comment

#246 - fix: add fixes for new widgets

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 2 comments

#245 - style: update precommit

Pull Request - State: closed - Opened by tlambert03 over 1 year ago

#244 - fix: Prevent crash when pixelSize = 0

Pull Request - State: closed - Opened by ianhi over 1 year ago - 1 comment

#243 - Fix test error from skimage warning

Pull Request - State: closed - Opened by ianhi over 1 year ago - 1 comment

#242 - Fix: Update mda for new pymmcore-widgets

Pull Request - State: closed - Opened by ianhi over 1 year ago - 1 comment

#241 - Using deprecated `_qt_viewer` causing warnings/crashes

Issue - State: closed - Opened by ianhi over 1 year ago

#239 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#238 - fix: update to match latest pymmcore widgets updates

Pull Request - State: closed - Opened by fdrgsp over 1 year ago

#237 - fix: fixing usage of widgets [wip]

Pull Request - State: closed - Opened by tlambert03 over 1 year ago

#236 - fix: remove private import from pymmcore-widgets

Pull Request - State: closed - Opened by tlambert03 over 1 year ago

#235 - refactor: simplify on-frame logic

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 3 comments