pymedphys/pymedphys issues and pull requests

#1877 - source to collimator distance for the beams for Pinnacle to Dicom conversion

Issue - State: open - Opened by EmanShowkatian 3 months ago - 1 comment

#1876 - New minor release (0.41.0 or 0.40.1)?

Issue - State: open - Opened by Matthew-Jennings 3 months ago - 5 comments

#1875 - Issue reading catheter coordinates from RP dicom file of brachytherapy

Issue - State: open - Opened by AdnanJafar 3 months ago - 1 comment

#1874 - Add a high-quality DVH module?

Issue - State: open - Opened by Matthew-Jennings 4 months ago - 7 comments
Labels: enhancement, python

#1873 - RT Images files cannot be converted

Issue - State: open - Opened by NandhiniDhand 4 months ago - 1 comment

#1872 - Links for ICCR 2024

Issue - State: open - Opened by sjswerdloff 5 months ago
Labels: app

#1871 - test mosaiq test fail solution

Pull Request - State: closed - Opened by Matthew-Jennings 5 months ago

#1870 - test windows linting

Pull Request - State: closed - Opened by Matthew-Jennings 5 months ago - 1 comment

#1869 - test windows linting

Pull Request - State: closed - Opened by Matthew-Jennings 5 months ago

#1868 - [Stack 2/n] Simplify streamlit

Pull Request - State: closed - Opened by SimonBiggs 5 months ago - 1 comment

#1867 - Add custom, numba-accelerated 1D, 2D & 3D linear interpolation.

Pull Request - State: closed - Opened by Matthew-Jennings 5 months ago - 9 comments

#1866 - Issue on page /users/howto/gamma/1D-from-csv.html

Issue - State: open - Opened by cl49 6 months ago - 1 comment

#1865 - Refactor merge

Pull Request - State: closed - Opened by SimonBiggs 6 months ago - 2 comments

#1864 - [Stack 1/n] Extracting from the bak file, uploading approved CSVs

Pull Request - State: closed - Opened by SimonBiggs 6 months ago - 8 comments

#1863 - [Stack 2/n] Refactoring the MOSAIQ mocking component of the library

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1862 - Yup, makes sense. I guess the key here is that I imagine going forward there are going to be trade offs when calling models, one being the "fast, cheap, not as intelligent", and the other end of the spectrum being "slower, more expensive, more intelligent".

Issue - State: open - Opened by SimonBiggs 7 months ago

#1861 - canonical XML doesn't honour the order of a list of identical xml elements, or at least it didn't back in the day.

Issue - State: open - Opened by SimonBiggs 7 months ago

#1860 - [Stack 2/3] Mosaiq tooling refinements

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1859 - [Stack 1/3] Include deps used for Claude Mosaiq streamlit app

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1858 - User tracking of electron factor algorithm deviations

Issue - State: open - Opened by SimonBiggs 7 months ago
Labels: bug

#1857 - Downgrade scipy

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1856 - Test ef baseline with scipy reversion

Pull Request - State: closed - Opened by SimonBiggs 7 months ago - 1 comment

#1855 - Fix readme links on GitHub, accept some duplication

Pull Request - State: closed - Opened by SimonBiggs 7 months ago - 1 comment

#1854 - Iteratively reintroduce Pyright functionality

Issue - State: open - Opened by Matthew-Jennings 7 months ago
Labels: CI / CD

#1853 - Update the Electron Factors baseline | Fixes cypress CI

Pull Request - State: closed - Opened by SimonBiggs 7 months ago - 2 comments

#1852 - Get Pyright passing CI

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1851 - [Stack 2/3] Ruff fmt

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1850 - [Stack 1/3] Various maintenance tasks

Pull Request - State: closed - Opened by SimonBiggs 7 months ago

#1849 - Various maintenance tasks

Pull Request - State: closed - Opened by SimonBiggs 7 months ago - 1 comment

#1848 - Fix some streamlit issues

Pull Request - State: closed - Opened by laser47-hue 7 months ago - 4 comments

#1847 - Claude Mosaiq demo

Pull Request - State: closed - Opened by SimonBiggs 8 months ago - 3 comments

#1846 - [Stack 1/n] Provide pynomynizer strategy for anonymising a MOSAIQ database

Pull Request - State: closed - Opened by sjswerdloff 8 months ago

#1845 - Converting TRF and DICOM Files to CSV for MLC and Gantry Information Extraction

Issue - State: open - Opened by KARAjihane 8 months ago - 32 comments

#1844 - Claude test issue

Issue - State: open - Opened by Matthew-Jennings 8 months ago - 2 comments

#1843 - Add Python-based Claude response to issue comment comments + CLI

Pull Request - State: open - Opened by Matthew-Jennings 8 months ago

#1842 - Add claude python script

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago

#1841 - MetersetMap Comparison

Issue - State: open - Opened by KARAjihane 8 months ago - 10 comments

#1840 - Omit direct output of prompt details in Claude's response post

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago

#1839 - Add filter to Claude prompt

Issue - State: closed - Opened by Matthew-Jennings 8 months ago - 9 comments

#1838 - Claude responds with context of entire issue

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago

#1837 - Update claude-assistant.yml

Pull Request - State: closed - Opened by SimonBiggs 8 months ago

#1836 - Add Claude response to "@!claude" in new or updated comments on issues or PRs

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago - 10 comments

#1835 - Claude test

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago

#1834 - add Claude Assistant

Pull Request - State: closed - Opened by Matthew-Jennings 8 months ago - 4 comments

#1833 - Anthropic's Claude integrations

Issue - State: open - Opened by Matthew-Jennings 9 months ago - 5 comments

#1832 - Add Marcus Fisk as an active contributor

Pull Request - State: closed - Opened by laser47-hue 9 months ago - 4 comments

#1831 - Test poetry check when fix is needed and fix Github Actions warning

Pull Request - State: closed - Opened by Matthew-Jennings 9 months ago - 20 comments

#1830 - Update affiliation

Pull Request - State: closed - Opened by SimonBiggs 9 months ago

#1829 - Update affiliations Phil

Pull Request - State: closed - Opened by pchlap 9 months ago

#1828 - Fix the icom listener test error

Pull Request - State: closed - Opened by laser47-hue 9 months ago - 11 comments

#1827 - Add the linac state code 16, correct the meanning of code 34

Pull Request - State: closed - Opened by daliDuans 9 months ago - 10 comments

#1826 - Fix test failures

Pull Request - State: closed - Opened by Matthew-Jennings 9 months ago - 10 comments

#1825 - 0.40.0 release prep

Pull Request - State: closed - Opened by Matthew-Jennings 9 months ago - 7 comments

#1824 - Independent dose calculation of Brachytherapy Dicom files

Issue - State: closed - Opened by Suman-c21 9 months ago - 6 comments

#1823 - compairing leaf positions VMAT system and plan dicom using Python

Issue - State: open - Opened by zahmadi263 10 months ago - 1 comment

#1822 - a problem when convert my Elekta infinity logfiles to csv files

Issue - State: open - Opened by daliDuans 10 months ago - 10 comments

#1821 - PyMedPhys Gui issue

Issue - State: closed - Opened by zism 10 months ago - 15 comments

#1820 - Simplify propagate test

Pull Request - State: closed - Opened by nlambriICH 10 months ago - 1 comment

#1819 - Forge a release

Issue - State: closed - Opened by SimonBiggs 12 months ago - 3 comments

#1818 - Improve error message for missing packages

Pull Request - State: closed - Opened by nlambriICH 12 months ago - 12 comments

#1817 - Presentation @ ICCR

Issue - State: open - Opened by SimonBiggs 12 months ago - 17 comments

#1816 - Bring streamlit back

Pull Request - State: closed - Opened by SimonBiggs 12 months ago - 3 comments

#1815 - a problem when convert my logfiles to csv files.

Issue - State: closed - Opened by daliDuans 12 months ago - 8 comments

#1814 - Pull Dicom Record tags from MosaiQ

Issue - State: open - Opened by Sogad98 12 months ago - 5 comments

#1813 - Gamma analysis fails simple unit test

Issue - State: closed - Opened by TimosBrain about 1 year ago - 13 comments

#1812 - Comparing trf to rtplan error

Issue - State: open - Opened by RemcoWouters95 about 1 year ago - 2 comments

#1811 - Pinnacle registration info

Issue - State: open - Opened by hotsenblotz about 1 year ago - 9 comments

#1810 - Unity MRLinac trf logfile read error

Issue - State: open - Opened by KeoJam over 1 year ago - 2 comments

#1809 - export pinnacle plan mlc boundaries is wrong

Issue - State: open - Opened by KeoJam over 1 year ago - 5 comments

#1808 - Create a binary with pyinstaller

Issue - State: closed - Opened by ArthurRochette over 1 year ago - 3 comments

#1807 - Fix docs building

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago

#1806 - Run poetry update

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago

#1805 - Bump tornado from 6.3 to 6.3.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#1804 - Bump requests from 2.28.2 to 2.31.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#1803 - Move Pinnacle module out of experimental

Pull Request - State: closed - Opened by pchlap over 1 year ago - 4 comments

#1802 - fixed deprecation errors np.int and np.float

Pull Request - State: closed - Opened by ayalalazaro over 1 year ago

#1801 - Bring back quickcheck

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago - 4 comments

#1800 - Bring back removed psuedo

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago - 3 comments
Labels: bug

#1799 - remove js/app dir

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago

#1798 - Bump electron from 19.0.6 to 19.1.8 in /js/app

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 4 comments
Labels: dependencies, javascript

#1797 - Interest in an Eclipse API gRPC bridge?

Issue - State: open - Opened by SimonBiggs over 1 year ago - 6 comments

#1796 - Move Pinnacle out of Experimental?

Issue - State: closed - Opened by SimonBiggs over 1 year ago - 10 comments

#1795 - Purge and clean

Pull Request - State: closed - Opened by SimonBiggs over 1 year ago - 16 comments

#1794 - Cleaning out experimental

Issue - State: open - Opened by SimonBiggs over 1 year ago - 4 comments

#1793 - DICOM experimental anonymise not working with Python 3.11

Issue - State: closed - Opened by SimonBiggs over 1 year ago - 3 comments

#1792 - "Live Code" feature not working in docs examples

Issue - State: open - Opened by Matthew-Jennings almost 2 years ago - 1 comment
Labels: documentation

#1791 - Fix the citation

Pull Request - State: closed - Opened by SimonBiggs almost 2 years ago - 2 comments

#1790 - Update pymedphys deps

Pull Request - State: closed - Opened by Matthew-Jennings almost 2 years ago - 5 comments
Labels: dependencies, python

#1789 - tkinter is not listed as a dependency in pyproject.toml (used in experimental: plancomplexity, imported in _imports)

Issue - State: closed - Opened by sjswerdloff almost 2 years ago - 1 comment

#1779 - Pyoxidizer build issue - any workaround to do this manually since reaching this website is blocked in company's laptop

Issue - State: open - Opened by Datarambler almost 2 years ago - 2 comments

#1778 - Bump qs from 6.5.2 to 6.5.3 in /lib/pymedphys/tests/e2e

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 5 comments
Labels: dependencies, javascript

GitHub / pymedphys/pymedphys issues and pull requests