Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / pykale/pykale issues and pull requests
#446 - Integrate DrugBAN example to PyKale -- Lightning Version
Pull Request -
State: open - Opened by jiayang-zhang 10 days ago
- 1 comment
Labels: new feature
#445 - Pin torch to 2.3.0
Pull Request -
State: closed - Opened by jiayang-zhang 16 days ago
- 1 comment
Labels: bug
#444 - 443 Fix Scheduled Test OSError
Pull Request -
State: closed - Opened by xianyuanliu about 1 month ago
Labels: bug
#443 - A scheduled test failed - OSError
Issue -
State: closed - Opened by xianyuanliu about 1 month ago
- 1 comment
Labels: action failed
#442 - Integrate DrugBAN example to PyKale -- PyTorch Version
Pull Request -
State: open - Opened by jiayang-zhang about 2 months ago
- 1 comment
Labels: new feature
#441 - 402 refactor merge modules losses distance and metrics to one
Pull Request -
State: closed - Opened by shuo-zhou 3 months ago
Labels: refactor
#440 - Support Codecov, Action Cache, Action Checkout v4 & Setup-miniconda v3
Pull Request -
State: closed - Opened by xianyuanliu 3 months ago
Labels: refactor
#439 - Update Actions Caches and Set Numpy below 2.0.0
Pull Request -
State: closed - Opened by xianyuanliu 3 months ago
- 1 comment
Labels: refactor
#438 - Upgrade to support Numpy 2.0.0+ and Matplotlib 3.9.1+
Pull Request -
State: open - Opened by xianyuanliu 3 months ago
- 2 comments
Labels: refactor, work-in-progress
#437 - Add mida_trainer pipeline
Pull Request -
State: open - Opened by shuo-zhou 3 months ago
- 3 comments
Labels: new feature
#436 - Fix bugs of greek letters in docstring.
Pull Request -
State: closed - Opened by wenruifan 4 months ago
- 1 comment
Labels: documentation
#435 - Fix bugs of greek letters in docstring.
Pull Request -
State: closed - Opened by wenruifan 4 months ago
Labels: documentation
#434 - Fix bugs of greek letters in docstring.
Pull Request -
State: closed - Opened by wenruifan 4 months ago
- 1 comment
Labels: documentation
#433 - Fix bugs of greek letters in docstring.
Pull Request -
State: closed - Opened by wenruifan 4 months ago
- 2 comments
Labels: documentation
#432 - Refine test Readme
Pull Request -
State: closed - Opened by xianyuanliu 9 months ago
- 2 comments
Labels: documentation
#431 - draft: Minimal tmnet installation.
Pull Request -
State: closed - Opened by tarpas 10 months ago
- 1 comment
#430 - Use a softer matching strategy for caching downloaded pip dependencies
Pull Request -
State: closed - Opened by xianyuanliu 10 months ago
- 1 comment
Labels: refactor
#429 - Cache preload data
Pull Request -
State: closed - Opened by wang-hlin 10 months ago
- 1 comment
Labels: refactor
#428 - [Refactor] Modifying add_protonet PR to align with the demo data download separation.
Issue -
State: closed - Opened by wenruifan 10 months ago
- 5 comments
Labels: refactor
#427 - Cache downloaded pip dependencies
Pull Request -
State: closed - Opened by wang-hlin 10 months ago
- 2 comments
#426 - Refactor documentation and resolve module visibility issues
Pull Request -
State: closed - Opened by xianyuanliu 10 months ago
- 1 comment
Labels: refactor
#425 - Module visibility issues
Issue -
State: closed - Opened by xianyuanliu 11 months ago
Labels: documentation
#424 - Split the test data downloading and test cases
Pull Request -
State: closed - Opened by wang-hlin 11 months ago
- 1 comment
#423 - Update the default checkpoint (ckpt) resume and test file name to None
Pull Request -
State: closed - Opened by xianyuanliu 11 months ago
- 1 comment
Labels: bug
#422 - Upgrade flack8
Pull Request -
State: closed - Opened by xianyuanliu 11 months ago
- 1 comment
Labels: refactor
#421 - Upgrade black
Pull Request -
State: closed - Opened by xianyuanliu 11 months ago
- 1 comment
Labels: refactor
#420 - Upgrade mirrors-mypy and isort
Pull Request -
State: closed - Opened by xianyuanliu 11 months ago
- 1 comment
Labels: bug
#419 - [Refactor] GitHub actions caching
Issue -
State: closed - Opened by wang-hlin 11 months ago
- 1 comment
Labels: refactor
#418 - Incorrect loss and accuracy found in the digit_dann example
Issue -
State: open - Opened by xianyuanliu 12 months ago
Labels: bug
#417 - Add resume and test checkpoint loading to main.py in example/cifas_cn…
Pull Request -
State: closed - Opened by wenruifan 12 months ago
- 1 comment
#416 - [Feature Request] Optimizing functional test time with pytest-testmon
Issue -
State: closed - Opened by xianyuanliu 12 months ago
- 1 comment
#415 - Change testing data directory paths
Pull Request -
State: closed - Opened by wang-hlin 12 months ago
- 2 comments
#414 - Change testing data directory paths
Pull Request -
State: closed - Opened by wang-hlin 12 months ago
#413 - Add testmon in pytest
Pull Request -
State: open - Opened by xianyuanliu 12 months ago
- 8 comments
Labels: refactor, work-in-progress, enable-test-changed-only
#412 - [Bug] Testing data is downloaded into different directory paths
Issue -
State: closed - Opened by xianyuanliu 12 months ago
Labels: bug
#411 - [Refactor] Let one config file contain all hyperparameters.
Issue -
State: closed - Opened by wenruifan 12 months ago
- 3 comments
Labels: refactor
#410 - Quantile Binning Refactor
Issue -
State: open - Opened by haipinglu 12 months ago
- 11 comments
Labels: refactor
#409 - Refactor resnet
Pull Request -
State: closed - Opened by wenruifan 12 months ago
- 1 comment
Labels: refactor
#408 - Short imagecnn
Pull Request -
State: closed - Opened by wenruifan 12 months ago
#407 - Add prototypical network
Pull Request -
State: closed - Opened by wenruifan about 1 year ago
- 2 comments
Labels: new feature
#406 - Support to load parameters from a saved checkpoint
Issue -
State: closed - Opened by xianyuanliu about 1 year ago
- 1 comment
Labels: enhancement
#405 - Upgrade changlog-ci to v1.1.2
Pull Request -
State: closed - Opened by xianyuanliu about 1 year ago
- 1 comment
Labels: dependencies
#404 - Changelog workflow runs failed
Issue -
State: closed - Opened by xianyuanliu about 1 year ago
Labels: action failed
#403 - Refine examples via unifying device settings and output folder names
Pull Request -
State: closed - Opened by xianyuanliu about 1 year ago
- 1 comment
Labels: refactor
#402 - [Refactor] Merge modules `losses`, `distance`, and `metrics` to one
Issue -
State: closed - Opened by wenruifan about 1 year ago
- 13 comments
Labels: refactor
#401 - Upgrade to support PyTorch 2.0+ and Lightning 2.0+
Pull Request -
State: closed - Opened by shuo-zhou about 1 year ago
- 4 comments
Labels: refactor
#398 - Refactor quantile binning
Pull Request -
State: closed - Opened by alanbijuthomas about 1 year ago
- 2 comments
Labels: refactor
#396 - [Feature Request] Consider input parameter validation in PyKale
Issue -
State: closed - Opened by SinaTabakhi about 1 year ago
Labels: enhancement
#395 - Create main.py, cross_validation for multisite_neuroimg_adapt example
Pull Request -
State: closed - Opened by alanbijuthomas about 1 year ago
- 1 comment
Labels: new feature
#394 - [Refactor] Merge all evaluation metrics into one module
Issue -
State: closed - Opened by SinaTabakhi about 1 year ago
- 3 comments
Labels: refactor, stale-issue
#393 - [Refactor] Considering the incorporation of the OneHotEncoder from scikit-learn into PyKale
Issue -
State: closed - Opened by SinaTabakhi about 1 year ago
- 3 comments
Labels: refactor, stale-issue
#391 - PyPI workflow to use ubuntu-latest
Pull Request -
State: closed - Opened by haipinglu about 1 year ago
- 1 comment
#390 - Release 0.1.2
Pull Request -
State: closed - Opened by haipinglu about 1 year ago
- 2 comments
#389 - Release 0.1.2
Pull Request -
State: closed - Opened by haipinglu about 1 year ago
- 1 comment
#388 - Release 0.1.2
Pull Request -
State: closed - Opened by haipinglu about 1 year ago
- 1 comment
#387 - Refactor QBin to be one level up from Pykale repo, under the pykale umbrella
Issue -
State: closed - Opened by Schobs over 1 year ago
- 2 comments
Labels: refactor, stale-issue
#386 - Refactor documentation and resolve module visibility issues in PyKale
Pull Request -
State: closed - Opened by SinaTabakhi over 1 year ago
- 1 comment
Labels: refactor
#385 - Refactor input parameter of the data loader in PolypharmacyDataset class
Pull Request -
State: closed - Opened by SinaTabakhi over 1 year ago
- 1 comment
Labels: refactor
#384 - Merging all the cnn modules such as seq_nn.py, attention_cnn.py into one cnn.py module
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
#383 - Update keyword param for pretrained ResNet
Pull Request -
State: closed - Opened by shuo-zhou over 1 year ago
- 2 comments
Labels: refactor
#382 - Fix "OSError" error in testflow
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 2 comments
Labels: bug
#381 - Update urllib3 requirement from <2.0 to <3.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 2 comments
Labels: dependencies
#380 - Fix readthedoc error
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 1 comment
Labels: bug
#379 - [Bug] Error raised by 'np.float' which was a deprecated alias for the builtin 'float'.
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
Labels: bug
#378 - [Bug] Error raised rdkit from kale\prepdata\chem_transform.py on windows, python 3.10 (with ubuntu no error)
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
Labels: bug
#377 - Remove the py3.7 and added py3.10 in docs & switch to pip install rdkit & replace np.float with np.float64.
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 2 comments
Labels: bug
#376 - [Bug] Error raised by version mismatch between PyTorch and Lightning while running tutorial
Issue -
State: closed - Opened by xianyuanliu over 1 year ago
- 2 comments
Labels: bug
#375 - PyTorch 2.0
Issue -
State: closed - Opened by XianyuanLiu over 1 year ago
- 1 comment
#374 - Update ipython requirement from <=8.12.0 to <=8.13.1
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 3 comments
Labels: dependencies
#373 - Update ipython requirement from <=8.12.0 to <=8.13.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 3 comments
Labels: dependencies
#372 - Update IPython version from <9.0 to <8.13 to support Python 3.8
Pull Request -
State: closed - Opened by XianyuanLiu over 1 year ago
- 1 comment
Labels: bug
#371 - [Bug] The latest IPython does not support Python 3.8
Issue -
State: closed - Opened by XianyuanLiu over 1 year ago
Labels: bug
#370 - Support py3.10 and remove py3.7
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 5 comments
Labels: bug
#369 - Add python version 3.10 and remove python version 3.7
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
#368 - [Bug]got error while running tutorial
Issue -
State: closed - Opened by zj71 over 1 year ago
- 2 comments
Labels: bug
#366 - Test
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
#365 - Update project.yml for the new project board
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 2 comments
Labels: new feature
#364 - test
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
#363 - test
Issue -
State: closed - Opened by Mdnaimulislam over 1 year ago
#362 - Databooks installation fails
Issue -
State: closed - Opened by XianyuanLiu over 1 year ago
- 1 comment
Labels: bug
#361 - Add MOGONET for multiomics integration using PyG and Lightning
Pull Request -
State: closed - Opened by SinaTabakhi over 1 year ago
- 1 comment
Labels: new feature
#360 - Add multimodal neural network for multimodal data integration with AVMNIST example
Pull Request -
State: closed - Opened by Mdnaimulislam over 1 year ago
- 2 comments
Labels: new feature
#359 - Create FUNDING.yml
Pull Request -
State: closed - Opened by haipinglu over 1 year ago
#358 - Add option to log messages to terminal
Pull Request -
State: closed - Opened by Schobs over 1 year ago
- 1 comment
Labels: new feature
#357 - Add pyg version constraint in CI envs
Pull Request -
State: closed - Opened by NYXFLOWER over 1 year ago
- 2 comments
#356 - Update CIFAR CNNTransformer example to Lightning
Pull Request -
State: closed - Opened by HaolinWang2001 over 1 year ago
- 6 comments
Labels: new feature
#355 - Fix tensorly version and update flake8 github link
Pull Request -
State: closed - Opened by shuo-zhou over 1 year ago
Labels: tests
#354 - Fix conda rdkit and boost-cpp conflict issue
Pull Request -
State: closed - Opened by peizhenbai almost 2 years ago
- 3 comments
Labels: bug, tests
#353 - Fix importlib-metadata
Pull Request -
State: closed - Opened by haipinglu almost 2 years ago
- 1 comment
Labels: dependencies
#348 - Create stale workflow
Pull Request -
State: closed - Opened by Mdnaimulislam about 2 years ago
- 6 comments
Labels: new feature
#347 - Fix rdkit error in testflow
Pull Request -
State: closed - Opened by peizhenbai about 2 years ago
- 2 comments
Labels: tests
#346 - Update the polypharmacy example and GripNet implementation
Pull Request -
State: closed - Opened by NYXFLOWER about 2 years ago
- 4 comments
Labels: enhancement
#345 - Add file path as a dicom dataset attribute
Pull Request -
State: closed - Opened by shuo-zhou about 2 years ago
- 1 comment
Labels: enhancement
#344 - Release 0.1.1
Pull Request -
State: closed - Opened by haipinglu about 2 years ago
- 2 comments
#343 - Add missing comma to bibtex and clarify python version supported
Pull Request -
State: closed - Opened by haipinglu about 2 years ago
- 1 comment
Labels: documentation
#342 - Add arguments to visualize, rename examples, and update docs
Pull Request -
State: closed - Opened by shuo-zhou about 2 years ago
- 1 comment
Labels: enhancement
#341 - Update Colab installation, add notebook hook, correct deepdta, and improve docs
Pull Request -
State: closed - Opened by shuo-zhou about 2 years ago
- 2 comments
Labels: refactor
#340 - Update reading DICOM and marker visualization
Pull Request -
State: closed - Opened by shuo-zhou about 2 years ago
- 1 comment
Labels: new feature
#339 - Add setup options and improve docs
Pull Request -
State: closed - Opened by haipinglu about 2 years ago
- 1 comment
Labels: dependencies
#338 - Improve GripNet implementation
Pull Request -
State: closed - Opened by NYXFLOWER about 2 years ago
- 2 comments
Labels: new feature