pyiron/pyiron_base issues and pull requests

#1186 - Bump gitpython from 3.1.34 to 3.1.35

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1185 - Bump pandas from 2.0.3 to 2.1.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1184 - Bump gitpython from 3.1.32 to 3.1.34

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1183 - Bump h5io from 0.1.8 to 0.1.9

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1182 - Introduce a dirty remove() function for projects

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 1 comment

#1181 - Update pysqa to 0.1.1

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1180 - Revert "Turn np.array_equal into proper asserts"

Pull Request - State: closed - Opened by niklassiemer 11 months ago - 3 comments

#1179 - Update to recent main

Pull Request - State: closed - Opened by niklassiemer 11 months ago

#1178 - Add a dummy ProjectHDFio class for generic to_dict()

Pull Request - State: closed - Opened by pmrv 11 months ago - 3 comments
Labels: enhancement, integration, format_black

#1177 - Bump sqlalchemy from 2.0.19 to 2.0.20

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1176 - Bump tqdm from 4.65.0 to 4.66.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1175 - Bump numpy from 1.24.3 to 1.25.2

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1173 - Use _get_safe_job_name in JobGenerator

Pull Request - State: closed - Opened by pmrv 12 months ago - 1 comment
Labels: bug, integration

#1172 - Bump dill from 0.3.6 to 0.3.7

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1171 - Flux Template rendering fix

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1170 - Update pysqa to 0.1.0

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1169 - Merge main

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1168 - Fake out old tale.datamining for backwards compat

Pull Request - State: closed - Opened by pmrv 12 months ago - 2 comments
Labels: bug, stale, integration, format_black

#1167 - Bump sqlalchemy from 2.0.18 to 2.0.19

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1166 - Bump gitpython from 3.1.31 to 3.1.32

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1165 - Bug fixes for flux

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1164 - Switch from dill to cloudpickle

Pull Request - State: closed - Opened by jan-janssen 12 months ago - 10 comments
Labels: help wanted, format_black

#1163 - Pyiron tables: Backwards compatibility broken again by #796

Issue - State: closed - Opened by pmrv 12 months ago - 1 comment
Labels: bug

#1162 - Add an interface to turn objects read-only

Pull Request - State: closed - Opened by pmrv 12 months ago - 6 comments
Labels: enhancement, integration, format_black

#1161 - Bump sqlalchemy from 2.0.17 to 2.0.18

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1160 - Bump h5io from 0.1.7 to 0.1.8

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1159 - Bump numpy from 1.24.3 to 1.25.1

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies

#1158 - Backwards compatibility test broken by development release on `pyiron_atomistics`

Issue - State: open - Opened by jan-janssen almost 1 year ago - 3 comments

#1157 - Forbid changing the job.server.run_mode after job.run

Issue - State: open - Opened by pmrv about 1 year ago - 2 comments

#1156 - Fixes for parallel master without database

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 2 comments
Labels: format_black

#1155 - Implement concurrent.futures.ProcessPoolExecutor interface

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 32 comments
Labels: format_black

#1154 - Reimplement the flux interface

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 38 comments
Labels: format_black

#1153 - Update run_mode documentation

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1152 - Introduce job.server.executor property

Pull Request - State: closed - Opened by jan-janssen about 1 year ago
Labels: format_black

#1151 - Add explicit return to run() functions

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1150 - Bump pandas from 2.0.2 to 2.0.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1149 - Add method to delete arrays from FlattenedStorage

Pull Request - State: closed - Opened by pmrv about 1 year ago
Labels: enhancement

#1148 - Drop pathlib2

Pull Request - State: closed - Opened by pmrv about 1 year ago - 1 comment
Labels: dependencies, integration

#1147 - Turn np.array_equal into proper asserts

Pull Request - State: closed - Opened by pmrv about 1 year ago - 2 comments

#1146 - Bump sqlalchemy from 2.0.16 to 2.0.17

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#1145 - Bump h5py from 3.8.0 to 3.9.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#1144 - Updating numpy creates a different number of warnings...which fails CI

Issue - State: open - Opened by liamhuber about 1 year ago - 3 comments

#1143 - Numpy update fails tests...what was intended?

Issue - State: closed - Opened by liamhuber about 1 year ago - 7 comments

#1142 - Re-introduce flux

Pull Request - State: closed - Opened by liamhuber about 1 year ago - 1 comment

#1141 - Revert flux introduction

Pull Request - State: closed - Opened by liamhuber about 1 year ago
Labels: integration

#1140 - Bump numpy from 1.24.3 to 1.25.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#1139 - FileTable on windows

Pull Request - State: closed - Opened by liamhuber about 1 year ago
Labels: integration

#1138 - Check if project path exists before creating Project

Pull Request - State: closed - Opened by niklassiemer about 1 year ago
Labels: format_black

#1137 - table job of packed Project fails to load data

Issue - State: closed - Opened by niklassiemer about 1 year ago - 1 comment

#1136 - Fix error message

Pull Request - State: closed - Opened by liamhuber about 1 year ago

#1135 - Instructions to install flux via conda are wrong

Issue - State: closed - Opened by liamhuber about 1 year ago - 4 comments

#1134 - Merge main

Pull Request - State: closed - Opened by niklassiemer about 1 year ago

#1133 - Add numpy equality check for unit tests

Pull Request - State: closed - Opened by pmrv about 1 year ago
Labels: enhancement, format_black

#1132 - Fix maintenance and add tests

Pull Request - State: closed - Opened by niklassiemer about 1 year ago

#1131 - Check pyiron installation

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 3 comments
Labels: help wanted, format_black

#1130 - project maintenance is outdated and not tested

Issue - State: open - Opened by Leimeroth about 1 year ago

#1129 - Bump sqlalchemy from 2.0.15 to 2.0.16

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1128 - Add tests for server object

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1127 - GPU bug fix

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1126 - Add GPU support

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 1 comment

#1125 - Drop future support

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 1 comment

#1124 - Update pysqa to 0.0.25

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1123 - Queue status

Pull Request - State: closed - Opened by jan-janssen about 1 year ago
Labels: format_black

#1122 - Pypi package broken

Issue - State: closed - Opened by jan-janssen about 1 year ago - 3 comments

#1121 - Move all run functions to separate module

Pull Request - State: closed - Opened by jan-janssen about 1 year ago
Labels: format_black

#1120 - Implement run_mode flux based on the flux python interface

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 5 comments
Labels: format_black

#1119 - Runmode manually: Fix message when run without database

Pull Request - State: closed - Opened by jan-janssen about 1 year ago
Labels: format_black

#1118 - Update deploy workflow

Pull Request - State: closed - Opened by niklassiemer about 1 year ago

#1117 - Secure UpdateDependabotPR.yml

Pull Request - State: closed - Opened by niklassiemer about 1 year ago - 1 comment

#1116 - Bump pandas from 2.0.1 to 2.0.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1115 - HasStoredTraits: Use setitem instead of setattr

Pull Request - State: closed - Opened by pmrv about 1 year ago
Labels: bug

#1114 - Documentation Enhancement: Correct YAML Indentation in queue.yaml Example

Issue - State: closed - Opened by rwexler about 1 year ago - 5 comments

#1113 - Do not try to double write objects that define to_hdf

Pull Request - State: closed - Opened by pmrv about 1 year ago
Labels: bug

#1112 - Only try to lock Traits objects

Pull Request - State: closed - Opened by pmrv about 1 year ago - 3 comments
Labels: enhancement, format_black

#1111 - fix for missing pyironconfig in contrib

Pull Request - State: closed - Opened by niklassiemer about 1 year ago
Labels: integration

#1110 - Add command line option to collect jobs

Pull Request - State: closed - Opened by jan-janssen about 1 year ago
Labels: format_black

#1109 - Fix command line crashing

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 4 comments

#1107 - Bump pint from 0.21 to 0.22

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 4 comments
Labels: dependencies

#1106 - Allow upper case characters in simulation code names

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 2 comments

#1105 - Remove working directory warnings

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 6 comments
Labels: format_black

#1104 - Allow for project_path to be relative

Pull Request - State: closed - Opened by liamhuber about 1 year ago - 2 comments

#1103 - :bug: `FileTable` does not play well with non-`None` project paths

Issue - State: closed - Opened by liamhuber about 1 year ago - 7 comments

#1102 - Bump sqlalchemy from 2.0.13 to 2.0.15

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1101 - Polish filetable

Pull Request - State: closed - Opened by liamhuber about 1 year ago
Labels: format_black

#1100 - Job_id at server is none for any job_name other than 'Al_T800K_remote'

Issue - State: closed - Opened by adyant2 about 1 year ago - 5 comments

#1099 - Refactor `load_file` to be more flexible

Pull Request - State: closed - Opened by niklassiemer about 1 year ago

#1098 - Bump sqlalchemy from 2.0.12 to 2.0.13

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1097 - Bump pyfileindex from 0.0.8 to 0.0.11

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1096 - OSError: Read-only file system :`~/pyiron.log`; Queued job fails!

Issue - State: closed - Opened by hari-ushankar about 1 year ago - 5 comments

#1095 - Updates to FileTable

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 4 comments
Labels: format_black

#1094 - Merge main

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1093 - Provide PyFileIndex as additional input

Pull Request - State: closed - Opened by jan-janssen about 1 year ago - 1 comment
Labels: format_black

#1092 - Update pyfileindex to 0.0.8

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1091 - Pysqa update to 0.0.24

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1090 - make executable.storage contain exec text itself?

Issue - State: open - Opened by appassionate about 1 year ago - 4 comments

#1089 - Recognize pyiron HDF5 files as pyiron files

Issue - State: open - Opened by jan-janssen about 1 year ago

#1088 - Bump pint from 0.20.1 to 0.21

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#1087 - Update pysqa to 0.0.23

Pull Request - State: closed - Opened by jan-janssen about 1 year ago

#1086 - remove delete remote

Pull Request - State: closed - Opened by Leimeroth about 1 year ago

#1085 - Queue adapter interface is not documented or tested

Issue - State: open - Opened by liamhuber about 1 year ago - 2 comments
Labels: documentation, help wanted, Discussion

GitHub / pyiron/pyiron_base issues and pull requests