Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyiron/pyiron_base issues and pull requests

#1437 - Force user to use `bool` for `delete_existing_job`

Pull Request - State: closed - Opened by samwaseda 9 months ago - 2 comments
Labels: code_smell, format_black

#1436 - Merge main

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1435 - Add doc

Pull Request - State: closed - Opened by samwaseda 9 months ago
Labels: format_black

#1434 - job.restart copies OUTPUT of parent job??

Issue - State: open - Opened by freyso 9 months ago - 9 comments

#1433 - Default job name of restarted simulations

Issue - State: closed - Opened by samwaseda 9 months ago - 10 comments
Labels: enhancement, help wanted, Feature request, Discussion

#1432 - add ruff linter

Pull Request - State: closed - Opened by jan-janssen 9 months ago
Labels: format_black

#1431 - Demo notebooks are execution order dependent

Issue - State: closed - Opened by liamhuber 9 months ago - 2 comments

#1430 - Update just the deloy action

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1429 - Centralized ci

Pull Request - State: closed - Opened by liamhuber 9 months ago - 11 comments

#1428 - Fix mybinder

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1427 - binder environments cannot be built with jupyterlab>4.1.6

Issue - State: closed - Opened by srmnitc 9 months ago - 3 comments

#1426 - Add Edit button to documentation

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1425 - Bump sqlalchemy from 2.0.29 to 2.0.30

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies

#1424 - Bump tqdm from 4.66.2 to 4.66.4

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies

#1423 - Bump jinja2 from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies

#1422 - Add documentation links in README

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1421 - Fix readme in project toml

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1420 - Switch from Sphinx to Jupyterbook

Pull Request - State: closed - Opened by jan-janssen 9 months ago

#1419 - meaningful error messages

Pull Request - State: open - Opened by XzzX 10 months ago - 2 comments

#1418 - Bump pympipool from 0.8.0 to 0.8.1

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1416 - Unlock when calling from_hdf for DataContainer

Pull Request - State: closed - Opened by raynol-dsouza 10 months ago - 1 comment

#1415 - Bump traitlets from 5.14.2 to 5.14.3

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1414 - Bump monty from 2024.3.31 to 2024.4.17

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1413 - Bump pysqa from 0.1.18 to 0.1.19

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#1412 - Update pympipool to 0.8.0

Pull Request - State: closed - Opened by jan-janssen 10 months ago

#1411 - Use _ensure_str_array_size in FlattenedStorage.extend

Pull Request - State: closed - Opened by pmrv 10 months ago - 5 comments
Labels: format_black

#1410 - Bump h5py from 3.10.0 to 3.11.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 1 comment
Labels: dependencies

#1409 - Set upper limit for Python version

Pull Request - State: closed - Opened by jan-janssen 10 months ago

#1408 - Update Notebooks to Python 3.12

Pull Request - State: closed - Opened by jan-janssen 10 months ago
Labels: integration

#1407 - Flattened storage extend cutting off str

Issue - State: closed - Opened by Leimeroth 10 months ago - 1 comment
Labels: bug

#1406 - Update pandas to 2.2.2

Pull Request - State: closed - Opened by jan-janssen 10 months ago

#1404 - Bump gitpython from 3.1.42 to 3.1.43

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 2 comments
Labels: dependencies

#1403 - Bump monty from 2024.2.26 to 2024.3.31

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1402 - bug in project packing

Issue - State: closed - Opened by jyang2009 11 months ago - 1 comment
Labels: bug

#1401 - Fixes for the `pack()` and `unpack()` method

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 8 comments

#1400 - GenericJob: extend the compress() function

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1399 - GenericJob: Fix restart file list

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1398 - Implement HasDict for HasStorage

Pull Request - State: closed - Opened by pmrv 11 months ago
Labels: enhancement

#1397 - File: no longer derive from string

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 3 comments

#1396 - Database: Extend job_name and project_path to 255 characters

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 1 comment
Labels: format_black

#1395 - Bump sqlalchemy from 2.0.28 to 2.0.29

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1394 - Files: first check working directory then archive

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1393 - Benchmark tests for job[...]

Issue - State: open - Opened by pmrv 11 months ago - 1 comment

#1392 - Misc FileBrowser features

Pull Request - State: closed - Opened by pmrv 11 months ago - 5 comments
Labels: Feature request, format_black

#1391 - Move recursive loading of DataContainer to HDF5Content

Pull Request - State: closed - Opened by pmrv 11 months ago - 1 comment
Labels: integration

#1390 - Mac Os - pympipool: Use localhost for connection rather than the network address

Pull Request - State: closed - Opened by jan-janssen 11 months ago
Labels: format_black

#1389 - test with old mac os version

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1388 - Debug broken test

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1386 - `GenericJob.executor_type` needs documentation

Issue - State: open - Opened by liamhuber 11 months ago

#1385 - Bump traitlets from 5.14.1 to 5.14.2

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1384 - pyiron table: Use with-statement for executor

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 8 comments

#1383 - Disable multi-core pyiron table test for mac os x

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 6 comments

#1382 - Just for debugging: Try to find broken test on Mac Os X

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1381 - ScriptJob: from to_hdf() and from_hdf()

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1380 - job.server: remove to_hdf() and from_hdf()

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 1 comment
Labels: format_black

#1379 - Datamining: Use to_dict() and from_dict()

Pull Request - State: closed - Opened by jan-janssen 11 months ago
Labels: format_black

#1377 - Executable: Switch from HasHDF to HasDict

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 2 comments
Labels: format_black

#1376 - warn if job could not be deleted

Pull Request - State: closed - Opened by XzzX 11 months ago

#1375 - raise exception on failed delete from database

Pull Request - State: closed - Opened by XzzX 11 months ago - 5 comments

#1374 - FlattenedStorage.split modifies original storage

Issue - State: open - Opened by pmrv 11 months ago
Labels: bug

#1373 - ExecutableContainerJob: store command line output in job.output

Pull Request - State: closed - Opened by jan-janssen 11 months ago

#1372 - Extend conda interface: store conda environments in project

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 7 comments
Labels: format_black

#1371 - More flexible conda environments

Issue - State: closed - Opened by jan-janssen 11 months ago

#1370 - Switch to use conda as default

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 1 comment

#1369 - pyiron table: Change default executor to "pympipool.mpi.executor.PyMPIExecutor"

Pull Request - State: closed - Opened by jan-janssen 11 months ago - 1 comment

#1368 - Bump sqlalchemy from 2.0.27 to 2.0.28

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#1367 - `GenericJob.save` just keeps copying things

Issue - State: open - Opened by liamhuber 11 months ago - 6 comments

#1366 - Bump monty from 2024.2.2 to 2024.2.26

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1365 - Add Lockable to FlattenedStorage

Pull Request - State: closed - Opened by pmrv 12 months ago - 1 comment
Labels: enhancement

#1364 - Add two classes for HasHDF/HasDict compat

Pull Request - State: closed - Opened by pmrv 12 months ago - 13 comments
Labels: enhancement, integration, format_black

#1363 - Increase timeout from 5min to 10min

Pull Request - State: closed - Opened by jan-janssen 12 months ago - 2 comments
Labels: stale

#1362 - Tables broken with default executor

Issue - State: closed - Opened by pmrv 12 months ago - 1 comment
Labels: bug

#1361 - Bump pandas from 2.2.0 to 2.2.1

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 3 comments
Labels: dependencies

#1360 - Bump pysqa from 0.1.15 to 0.1.16

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1359 - Bump pympipool from 0.7.13 to 0.7.15

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1358 - [minor] Opt in hash for pythonfunction

Pull Request - State: closed - Opened by liamhuber 12 months ago - 5 comments
Labels: format_black

#1357 - OSX 12 tests are sometime timing out

Issue - State: closed - Opened by liamhuber 12 months ago - 3 comments

#1356 - [patch] Introduce a flag for _not_ mangling the name of wrapped function jobs

Pull Request - State: closed - Opened by liamhuber 12 months ago - 2 comments
Labels: format_black

#1355 - Use keyword args for Dataframe.to_hdf

Pull Request - State: closed - Opened by pmrv 12 months ago

#1354 - How to use DataContainer in inspect mode?

Issue - State: closed - Opened by jan-janssen 12 months ago - 3 comments

#1352 - Fix the project type when the project is reloaded

Pull Request - State: closed - Opened by jan-janssen 12 months ago - 1 comment

#1351 - Project type is not correctly set when reloading jobs

Issue - State: closed - Opened by jan-janssen 12 months ago - 1 comment

#1350 - Move get_job{,_ids} to IsDatabase

Pull Request - State: closed - Opened by pmrv 12 months ago
Labels: format_black

#1349 - Remove project.sql_query

Pull Request - State: open - Opened by pmrv 12 months ago - 2 comments
Labels: stale, integration

#1348 - `Project.wrap_python_function` does not play nicely with name lengths

Issue - State: open - Opened by liamhuber 12 months ago - 5 comments

#1347 - loading jobs very slow

Issue - State: closed - Opened by ahmedabdelkawy 12 months ago - 5 comments

#1346 - Merge main

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1345 - Bump sqlalchemy from 2.0.26 to 2.0.27

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1344 - Bump gitpython from 3.1.41 to 3.1.42

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#1343 - Try to access files after HDF

Pull Request - State: closed - Opened by pmrv 12 months ago
Labels: performance

#1342 - merge main

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1341 - Catch signal of aborted job in job wrapper

Pull Request - State: closed - Opened by jan-janssen 12 months ago - 1 comment

#1340 - Fix test timeout to 5 minutes

Pull Request - State: closed - Opened by jan-janssen 12 months ago

#1339 - New release -- patch or minor

Issue - State: closed - Opened by liamhuber 12 months ago - 5 comments

#1338 - Update h5io_browser to 0.0.9

Pull Request - State: closed - Opened by jan-janssen 12 months ago