Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyiron/pyiron_base issues and pull requests

#1487 - Docs: Add explanation about pyiron environment variables

Pull Request - State: closed - Opened by jan-janssen 12 days ago - 1 comment

#1486 - Fix mybinder environment

Pull Request - State: closed - Opened by jan-janssen 14 days ago

#1485 - Executable: Set environment variables for subprocess

Pull Request - State: closed - Opened by jan-janssen 14 days ago

#1484 - Export server vars to executable scripts

Pull Request - State: closed - Opened by pmrv 14 days ago - 1 comment
Labels: enhancement

#1482 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 15 days ago

#1481 - Bump numpy from 1.26.4 to 2.0.0

Pull Request - State: open - Opened by dependabot[bot] 16 days ago
Labels: dependencies

#1480 - Scriptjob implement calculate() function

Pull Request - State: closed - Opened by jan-janssen 20 days ago - 1 comment
Labels: format_black

#1479 - ScriptJob: Replace write_input() with get_input_file_dict()

Pull Request - State: closed - Opened by jan-janssen 20 days ago

#1478 - Add raise_runtimeerror_for_failed_job() function

Pull Request - State: closed - Opened by jan-janssen 21 days ago

#1477 - Introduce calculate() function

Pull Request - State: closed - Opened by jan-janssen 21 days ago - 8 comments
Labels: format_black

#1476 - Separate execute_subprocess() function

Pull Request - State: closed - Opened by jan-janssen 21 days ago

#1475 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 22 days ago

#1474 - Reorder return values from handle_failed_job

Pull Request - State: closed - Opened by pmrv 22 days ago
Labels: bug

#1472 - Add get_input_file_dict() in GenericJob

Pull Request - State: closed - Opened by jan-janssen 22 days ago

#1471 - Bump pint from 0.23 to 0.24 - requires Python >=3.10

Pull Request - State: closed - Opened by dependabot[bot] 23 days ago - 2 comments
Labels: dependencies

#1470 - Update the h5io interface

Pull Request - State: closed - Opened by jan-janssen 26 days ago

#1469 - HDF5 interface: Convert h5io datatypes to nodes

Pull Request - State: closed - Opened by jan-janssen 26 days ago

#1468 - Fix typo in HDF5Content recursive loading

Pull Request - State: closed - Opened by pmrv 28 days ago
Labels: bug, format_black

#1467 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 29 days ago

#1466 - [minor] remove the backwards compatibility redirects

Pull Request - State: closed - Opened by liamhuber 29 days ago - 2 comments

#1465 - [patch] replace logger with snippets version

Pull Request - State: closed - Opened by liamhuber 29 days ago - 5 comments

#1464 - [minor] Add docstring in template job

Pull Request - State: closed - Opened by samwaseda 29 days ago

#1463 - Fix stacked pull requests

Pull Request - State: closed - Opened by jan-janssen 29 days ago - 2 comments

#1462 - Restart discussion

Issue - State: open - Opened by samwaseda 29 days ago

#1461 - [minor] Add `to_hdf` to the example in doc

Pull Request - State: closed - Opened by samwaseda 30 days ago

#1460 - Bump pyiron-snippets from 0.1.0 to 0.1.1

Pull Request - State: closed - Opened by dependabot[bot] 30 days ago
Labels: dependencies

#1459 - Bump pympipool from 0.8.3 to 0.8.4

Pull Request - State: closed - Opened by dependabot[bot] 30 days ago
Labels: dependencies

#1458 - [minor] remove ImportAlarm and deprecator stuff from the API

Pull Request - State: closed - Opened by liamhuber about 1 month ago - 10 comments

#1457 - [patch] use deprecate from pyiron_snippets

Pull Request - State: closed - Opened by liamhuber about 1 month ago - 2 comments

#1456 - [patch] use retry from pyiron_snippets

Pull Request - State: closed - Opened by liamhuber about 1 month ago - 4 comments

#1455 - [patch] Use ImportAlarm from pyiron_snippets

Pull Request - State: closed - Opened by liamhuber about 1 month ago - 8 comments

#1454 - [patch] Use Singleton from pyiron_snippets

Pull Request - State: closed - Opened by liamhuber about 1 month ago

#1453 - [patch] restore forbidding duplicate imports

Pull Request - State: closed - Opened by samwaseda about 1 month ago - 7 comments

#1452 - [minor] update docstring for `TemplateJob`

Pull Request - State: closed - Opened by samwaseda about 1 month ago - 2 comments

#1451 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago

#1450 - Bump monty from 2024.5.15 to 2024.5.24

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#1449 - [minor] refactor super minor things

Pull Request - State: closed - Opened by samwaseda about 1 month ago - 1 comment

#1448 - Replace copy_tree from distutils by copytree from shutil because dist…

Pull Request - State: closed - Opened by samwaseda about 1 month ago - 5 comments

#1447 - Remove ViewerUser / viewer_mode

Pull Request - State: open - Opened by niklassiemer about 1 month ago

#1446 - Report error on retry.

Pull Request - State: open - Opened by niklassiemer about 1 month ago

#1445 - Job name normalization causing issues

Issue - State: open - Opened by niklassiemer about 1 month ago - 2 comments
Labels: bug

#1444 - `test_import.py` cannot run twice

Issue - State: open - Opened by samwaseda about 1 month ago - 7 comments

#1443 - Combine import export example notebooks

Pull Request - State: closed - Opened by samwaseda about 1 month ago - 1 comment

#1442 - project move for cli

Pull Request - State: closed - Opened by XzzX about 1 month ago - 2 comments

#1441 - copy function for cli

Pull Request - State: closed - Opened by XzzX about 1 month ago - 1 comment

#1440 - Update pack and unpack methods

Pull Request - State: open - Opened by samwaseda about 1 month ago - 3 comments

#1439 - Bump monty from 2024.4.17 to 2024.5.15

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#1438 - Bump pympipool from 0.8.2 to 0.8.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#1437 - Force user to use `bool` for `delete_existing_job`

Pull Request - State: closed - Opened by samwaseda about 2 months ago - 2 comments
Labels: code_smell, format_black

#1436 - Merge main

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1435 - Add doc

Pull Request - State: closed - Opened by samwaseda about 2 months ago
Labels: format_black

#1434 - job.restart copies OUTPUT of parent job??

Issue - State: open - Opened by freyso about 2 months ago - 3 comments

#1433 - Default job name of restarted simulations

Issue - State: closed - Opened by samwaseda about 2 months ago - 10 comments
Labels: enhancement, help wanted, Feature request, Discussion

#1432 - add ruff linter

Pull Request - State: closed - Opened by jan-janssen about 2 months ago
Labels: format_black

#1431 - Demo notebooks are execution order dependent

Issue - State: closed - Opened by liamhuber about 2 months ago - 2 comments

#1430 - Update just the deloy action

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1429 - Centralized ci

Pull Request - State: closed - Opened by liamhuber about 2 months ago - 11 comments

#1428 - Fix mybinder

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1427 - binder environments cannot be built with jupyterlab>4.1.6

Issue - State: open - Opened by srmnitc about 2 months ago - 2 comments

#1426 - Add Edit button to documentation

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1425 - Bump sqlalchemy from 2.0.29 to 2.0.30

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#1424 - Bump tqdm from 4.66.2 to 4.66.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#1423 - Bump jinja2 from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#1422 - Add documentation links in README

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1421 - Fix readme in project toml

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1420 - Switch from Sphinx to Jupyterbook

Pull Request - State: closed - Opened by jan-janssen about 2 months ago

#1419 - meaningful error messages

Pull Request - State: open - Opened by XzzX 2 months ago - 2 comments

#1418 - Bump pympipool from 0.8.0 to 0.8.1

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#1416 - Unlock when calling from_hdf for DataContainer

Pull Request - State: closed - Opened by raynol-dsouza 2 months ago - 1 comment

#1415 - Bump traitlets from 5.14.2 to 5.14.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#1414 - Bump monty from 2024.3.31 to 2024.4.17

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#1413 - Bump pysqa from 0.1.18 to 0.1.19

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#1412 - Update pympipool to 0.8.0

Pull Request - State: closed - Opened by jan-janssen 2 months ago

#1411 - Use _ensure_str_array_size in FlattenedStorage.extend

Pull Request - State: closed - Opened by pmrv 3 months ago - 5 comments
Labels: format_black

#1410 - Bump h5py from 3.10.0 to 3.11.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#1409 - Set upper limit for Python version

Pull Request - State: closed - Opened by jan-janssen 3 months ago

#1408 - Update Notebooks to Python 3.12

Pull Request - State: closed - Opened by jan-janssen 3 months ago
Labels: integration

#1407 - Flattened storage extend cutting off str

Issue - State: closed - Opened by Leimeroth 3 months ago - 1 comment
Labels: bug

#1406 - Update pandas to 2.2.2

Pull Request - State: closed - Opened by jan-janssen 3 months ago

#1404 - Bump gitpython from 3.1.42 to 3.1.43

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 2 comments
Labels: dependencies

#1403 - Bump monty from 2024.2.26 to 2024.3.31

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#1402 - bug in project packing

Issue - State: closed - Opened by jyang2009 3 months ago - 1 comment
Labels: bug

#1401 - Fixes for the `pack()` and `unpack()` method

Pull Request - State: closed - Opened by jan-janssen 3 months ago - 6 comments

#1400 - GenericJob: extend the compress() function

Pull Request - State: closed - Opened by jan-janssen 3 months ago

#1399 - GenericJob: Fix restart file list

Pull Request - State: closed - Opened by jan-janssen 3 months ago

#1398 - Implement HasDict for HasStorage

Pull Request - State: closed - Opened by pmrv 3 months ago
Labels: enhancement

#1397 - File: no longer derive from string

Pull Request - State: closed - Opened by jan-janssen 3 months ago - 3 comments

#1396 - Database: Extend job_name and project_path to 255 characters

Pull Request - State: closed - Opened by jan-janssen 3 months ago - 1 comment
Labels: format_black

#1395 - Bump sqlalchemy from 2.0.28 to 2.0.29

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#1394 - Files: first check working directory then archive

Pull Request - State: closed - Opened by jan-janssen 3 months ago

#1393 - Benchmark tests for job[...]

Issue - State: open - Opened by pmrv 3 months ago - 1 comment

#1392 - Misc FileBrowser features

Pull Request - State: closed - Opened by pmrv 3 months ago - 5 comments
Labels: Feature request, format_black

#1391 - Move recursive loading of DataContainer to HDF5Content

Pull Request - State: closed - Opened by pmrv 4 months ago - 1 comment
Labels: integration

#1390 - Mac Os - pympipool: Use localhost for connection rather than the network address

Pull Request - State: closed - Opened by jan-janssen 4 months ago
Labels: format_black

#1389 - test with old mac os version

Pull Request - State: closed - Opened by jan-janssen 4 months ago

#1388 - Debug broken test

Pull Request - State: closed - Opened by jan-janssen 4 months ago