Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pyiron/pyiron_atomistics issues and pull requests

#1556 - Sphinx log parser fix

Pull Request - State: open - Opened by skatnagallu 5 months ago - 1 comment

#1555 - Merge main

Pull Request - State: closed - Opened by jan-janssen 5 months ago

#1554 - Update pyiron_base to 0.10.1

Pull Request - State: closed - Opened by jan-janssen 5 months ago - 1 comment

#1552 - Sphinx job parsing issues

Issue - State: open - Opened by skatnagallu 5 months ago
Labels: bug

#1551 - Bump numpy from 1.26.4 to 2.1.1

Pull Request - State: open - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, major

#1550 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago

#1549 - clears output for restarted jobs

Pull Request - State: closed - Opened by skatnagallu 5 months ago - 3 comments

#1548 - Bump pylammpsmpi from 0.2.24 to 0.2.25

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, patch

#1547 - Remove conda default channel

Pull Request - State: closed - Opened by jan-janssen 5 months ago - 1 comment

#1546 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago - 1 comment

#1545 - No longer use defaults

Pull Request - State: closed - Opened by jan-janssen 5 months ago - 1 comment

#1544 - CI conda setup allows defaults

Issue - State: open - Opened by liamhuber 5 months ago
Labels: bug

#1543 - Pass axis in QHA job plotting

Pull Request - State: closed - Opened by pmrv 5 months ago - 1 comment

#1542 - Emit error when trying to set negative number of empty bands in DFT

Pull Request - State: closed - Opened by pmrv 5 months ago - 4 comments
Labels: integration

#1541 - VASP: Add collect_output() function again

Pull Request - State: closed - Opened by jan-janssen 5 months ago - 2 comments

#1540 - Bump pylammpsmpi from 0.2.23 to 0.2.24

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, patch

#1539 - Remove to_hdf() and from_hdf() from calphy job

Pull Request - State: open - Opened by jan-janssen 6 months ago - 1 comment

#1538 - Remove to_hdf() and from_hdf() from LAMMPS input class

Pull Request - State: open - Opened by jan-janssen 6 months ago - 1 comment

#1537 - Nicer error message when no potential tables configured

Pull Request - State: closed - Opened by pmrv 6 months ago - 2 comments
Labels: integration, format_black

#1536 - Rename dictionary objects to obj_dict

Pull Request - State: closed - Opened by pmrv 6 months ago

#1535 - Bump phonopy from 2.26.6 to 2.27.0

Pull Request - State: open - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, minor

#1534 - Bump structuretoolkit from 0.0.27 to 0.0.28

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1533 - Bump scipy from 1.14.0 to 1.14.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1532 - Bump mp-api from 0.41.2 to 0.42.1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, minor

#1531 - Bump pyiron-base from 0.9.12 to 0.10.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 22 comments
Labels: dependencies, minor

#1530 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment
Labels: integration

#1529 - Bump numpy from 1.26.4 to 2.1.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 6 comments
Labels: help wanted, dependencies, major

#1528 - Refactor resource loading in lammps/vasp/sphinx

Pull Request - State: closed - Opened by pmrv 6 months ago - 2 comments

#1527 - Use ResourceResolvers in lammps/vasp/sphinx

Pull Request - State: closed - Opened by pmrv 6 months ago - 4 comments
Labels: enhancement, integration, format_black, patch

#1526 - Bump matplotlib from 3.9.1 to 3.9.2

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1525 - Bump pyiron-base from 0.9.11 to 0.9.12

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1524 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#1523 - Bump phonopy from 2.26.6 to 2.26.7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1522 - Bump pyiron-snippets from 0.1.3 to 0.1.4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, patch

#1521 - Bump pyscal3 from 3.2.6 to 3.2.7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, patch

#1520 - Bump matplotlib from 3.9.1 to 3.9.1.post1

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies, patch

#1519 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#1518 - import job to pyiron

Issue - State: closed - Opened by jyang2009 6 months ago - 2 comments
Labels: question

#1517 - Update pyiron_base to 0.9.11

Pull Request - State: closed - Opened by jan-janssen 6 months ago - 1 comment

#1516 - Fix NBLOCK parsing in Vasp>=6

Pull Request - State: closed - Opened by pmrv 6 months ago - 1 comment

#1515 - VASP parser Outcar.get_steps broken with VASP 6.4.3

Issue - State: closed - Opened by dhoulek 6 months ago - 3 comments
Labels: bug

#1514 - Always set retain_charge_density/electrostatic_potential

Pull Request - State: closed - Opened by pmrv 6 months ago - 1 comment
Labels: bug

#1513 - LCHARG is wrongly handled with `retain_charge_density`

Issue - State: closed - Opened by dhoulek 6 months ago - 2 comments
Labels: bug

#1512 - Bump pylammpsmpi from 0.2.22 to 0.2.23

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 3 comments
Labels: dependencies, patch

#1511 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#1510 - Update pylammpsmpi 0.2.23

Pull Request - State: closed - Opened by jan-janssen 6 months ago - 1 comment

#1509 - Use .content rather than .project_hdf5

Pull Request - State: closed - Opened by pmrv 6 months ago - 6 comments
Labels: bug, integration, format_black

#1508 - Cell (along with other properties) cannot be accessed from `project_hdf5` in Sphinx

Issue - State: open - Opened by samwaseda 7 months ago - 2 comments
Labels: bug, major

#1507 - Update LAMMPS to 2024.06.27

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1506 - [patch] Replace conda-incubator with pyrion/actions

Pull Request - State: closed - Opened by liamhuber 7 months ago - 6 comments

#1505 - Update pylammpsmpi to 0.2.22

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1504 - Enable Python 3.9 tests again - for lower bound

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 2 comments

#1503 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago - 1 comment

#1502 - Bump pyiron-base from 0.9.9 to 0.9.10

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 3 comments
Labels: dependencies, patch

#1501 - Bump numpy from 1.26.4 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, major

#1500 - Sphinx: Fix check_setup() for band structure calculation

Pull Request - State: closed - Opened by skatnagallu 7 months ago - 1 comment
Labels: integration, patch

#1498 - Update pyiron_base to 0.9.9

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1497 - Fixes for LAMMPS interactive

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1496 - ruff fixes

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment
Labels: format_black

#1495 - Bump phonopy from 2.26.5 to 2.26.6

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, patch

#1494 - Update pylammpsmpi to 0.2.21

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1493 - Bump pyiron-snippets from 0.1.2 to 0.1.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 6 comments
Labels: dependencies, patch

#1492 - Bump phonopy from 2.26.3 to 2.26.5

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, patch

#1491 - Bump pint from 0.24.1 to 0.24.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, patch

#1490 - Bump spglib from 2.4.0 to 2.5.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, minor

#1489 - Bump pyscal3 from 3.2.5 to 3.2.6

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, patch

#1488 - Bump structuretoolkit from 0.0.26 to 0.0.27

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 3 comments
Labels: dependencies, patch

#1487 - Update structuretoolkit to 0.0.27

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1486 - Clean up the SxExtOpt because it's gonna be part of a publication

Pull Request - State: closed - Opened by samwaseda 7 months ago - 1 comment
Labels: patch

#1485 - Bump phonopy from 2.26.2 to 2.26.3

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, patch

#1484 - Remove unused argument

Pull Request - State: closed - Opened by pmrv 7 months ago - 2 comments

#1483 - Bump phonopy from 2.25.0 to 2.26.2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 3 comments
Labels: dependencies, minor

#1482 - Update pyiron_base to 0.9.6

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 1 comment

#1481 - AbstractPotential: remove dead parameter

Pull Request - State: closed - Opened by pmrv 7 months ago - 1 comment

#1480 - Bump matplotlib from 3.9.0 to 3.9.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, patch

#1479 - Bump scikit-learn from 1.5.0 to 1.5.1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, patch

#1475 - Bump phonopy from 2.24.3 to 2.25.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 2 comments
Labels: dependencies, minor

#1474 - Delay NGLview import

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 2 comments
Labels: format_black

#1473 - Add vasp_function() - use VASP job in a functional approach

Pull Request - State: open - Opened by jan-janssen 7 months ago - 1 comment

#1472 - Add lammps_function() - use LAMMPS job in a functional approach

Pull Request - State: closed - Opened by jan-janssen 7 months ago - 10 comments
Labels: format_black

#1471 - Files are not written for remote jobs

Issue - State: closed - Opened by Leimeroth 7 months ago - 20 comments
Labels: bug

#1470 - Update dependabot.yml

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1469 - Solvation energy 3

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1468 - parse ediel_sol from OUTCAR

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1467 - Update pint to 0.24.1

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 2 comments

#1466 - Update scipy to 1.14.0

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1465 - parse ediel_sol from OUTCAR

Pull Request - State: closed - Opened by jyang2009 8 months ago - 3 comments
Labels: format_black

#1464 - Bump phonopy from 2.24.2 to 2.24.3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 2 comments
Labels: dependencies, patch

#1463 - Parse VASP-ML output

Pull Request - State: open - Opened by jan-janssen 8 months ago
Labels: format_black

#1462 - Update pyiron_base to 0.9.4

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1461 - Merge main

Pull Request - State: closed - Opened by jan-janssen 8 months ago

#1460 - Update pyiron_base, pyiron_snippets, pint and structuretoolkit

Pull Request - State: closed - Opened by jan-janssen 8 months ago - 1 comment

#1459 - Change index error in electronic structure to warning

Pull Request - State: closed - Opened by samwaseda 8 months ago - 1 comment
Labels: minor

#1458 - Bump numpy from 1.26.4 to 2.0.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 8 comments
Labels: dependencies

#1457 - remove calc_static from DFT

Pull Request - State: closed - Opened by samwaseda 8 months ago - 2 comments
Labels: bug, integration, format_black, code_smell

#1456 - Merge main

Pull Request - State: closed - Opened by jan-janssen 8 months ago

#1455 - Merge main

Pull Request - State: closed - Opened by jan-janssen 8 months ago