pyhrf/pyhrf issues and pull requests

#175 - Unit tests: cleaning-up warnings and errors

Pull Request - State: closed - Opened by Virgiliok about 6 years ago

#174 - pip 10.0.1 parse_requirements

Pull Request - State: closed - Opened by greenkidneybean over 6 years ago - 1 comment

#173 - Improving installation script and documentation.

Pull Request - State: closed - Opened by himito over 7 years ago

#172 - nibabel fix for Travis

Pull Request - State: closed - Opened by himito about 8 years ago

#171 - Add a Gitter chat badge to README.rst

Pull Request - State: closed - Opened by gitter-badger about 8 years ago - 1 comment

#170 - Error ouput on commandline parsing not always explicit

Issue - State: open - Opened by JanWP about 8 years ago
Labels: bug

#169 - multiprocessing is always enabled in certain cases

Issue - State: open - Opened by thperret about 8 years ago - 2 comments
Labels: bug, investigate

#168 - [deps] Nibabel version > 2.1.0 changed the GiftiImage API

Issue - State: closed - Opened by thperret about 8 years ago
Labels: bug, packaging

#167 - Documentation update for Ubuntu 16.04

Pull Request - State: closed - Opened by thperret about 8 years ago - 1 comment
Labels: documentation

#166 - add an processing example with included datafiles

Pull Request - State: closed - Opened by thperret over 8 years ago
Labels: documentation

#165 - add developer documentation on website

Pull Request - State: closed - Opened by thperret over 8 years ago - 2 comments
Labels: documentation

#164 - modif-index-web-ff

Pull Request - State: closed - Opened by fforbes over 8 years ago

#163 - add website page for Visualizing results

Pull Request - State: closed - Opened by thperret over 8 years ago
Labels: documentation

#162 - fix type in include command

Pull Request - State: closed - Opened by thperret over 8 years ago
Labels: documentation, packaging

#161 - update website documentation

Pull Request - State: closed - Opened by thperret over 8 years ago
Labels: documentation, packaging

#160 - add documentation instruction for installation for Ubuntu 16.04

Issue - State: open - Opened by thperret over 8 years ago
Labels: packaging

#159 - Bump to 0.4.3

Pull Request - State: closed - Opened by thperret over 8 years ago - 1 comment
Labels: cleanup, packaging

#158 - fix error when importing main function

Pull Request - State: closed - Opened by rcherbonnier over 8 years ago - 1 comment
Labels: bug, cleanup, packaging

#157 - fix an error for contrasts computation

Pull Request - State: closed - Opened by thperret over 8 years ago - 1 comment
Labels: bug

#156 - Release fixes

Pull Request - State: closed - Opened by thperret over 8 years ago - 2 comments
Labels: packaging

#155 - Bump to 0.4.2 version

Pull Request - State: closed - Opened by thperret over 8 years ago
Labels: packaging

#154 - update website documentation in preparation to the next release

Pull Request - State: closed - Opened by thperret over 8 years ago - 3 comments
Labels: documentation, packaging

#153 - [#137] fix error when there is only one event for one condition

Pull Request - State: closed - Opened by thperret over 8 years ago - 1 comment
Labels: bug

#152 - Correct some vem command line help messages

Pull Request - State: closed - Opened by thperret over 8 years ago - 3 comments
Labels: packaging

#151 - Vem command line

Pull Request - State: closed - Opened by thperret over 8 years ago - 1 comment
Labels: packaging

#150 - Prepare next release

Pull Request - State: closed - Opened by thperret over 8 years ago - 1 comment
Labels: packaging

#149 - Cleanup unitary tests line commands

Issue - State: open - Opened by thperret over 8 years ago
Labels: cleanup, packaging

#148 - [Closes #131, Closes #126, Fixes #142, Closes #145, #130, Fixes #146, #118, Closes #127, Closes #121, Closes #119, Closes #117] Prepare for next release

Pull Request - State: closed - Opened by thperret over 8 years ago - 2 comments
Labels: bug, cleanup, documentation, new feature, optimization, packaging

#147 - numpy.linalg.norm returns nan for int16 arrays

Issue - State: closed - Opened by thperret almost 9 years ago - 1 comment
Labels: bug

#146 - [deps] unittests errors with PIL (Pillow)

Issue - State: closed - Opened by thperret almost 9 years ago - 1 comment
Labels: bug, investigate, packaging

#145 - [deps] numpy FutureWarning

Issue - State: closed - Opened by thperret almost 9 years ago
Labels: cleanup, investigate, packaging

#144 - [deps] nipy FutureWarnings

Issue - State: open - Opened by thperret almost 9 years ago
Labels: cleanup, packaging

#143 - [deps] unit tests error with latest scikit-learn version

Issue - State: closed - Opened by thperret almost 9 years ago - 1 comment
Labels: bug, duplicate, packaging

#142 - needs minor fixups for compatibility with sklearn >= 0.17

Issue - State: closed - Opened by yarikoptic almost 9 years ago - 1 comment
Labels: cleanup, packaging

#141 - [Fixes #140] add consistent shebang

Pull Request - State: closed - Opened by thperret almost 9 years ago - 1 comment
Labels: cleanup

#140 - use consistent shebang and executable bit for scripts

Issue - State: closed - Opened by thperret almost 9 years ago - 1 comment
Labels: cleanup

#139 - installation hogs huge amount of RAM (24GB)

Issue - State: closed - Opened by yarikoptic almost 9 years ago - 11 comments

#138 - BF: use consistent shebang and executable bit for scripts

Pull Request - State: closed - Opened by yarikoptic almost 9 years ago - 6 comments

#137 - Error while launching an analysis with only one condition in the paradigm

Issue - State: closed - Opened by Solvi about 9 years ago - 1 comment
Labels: bug, investigate

#136 - [Fixes #134, Closes #135] 0.4.1.post1 release

Pull Request - State: closed - Opened by thperret about 9 years ago

#135 - Missing function in vem_tools.py

Issue - State: closed - Opened by thperret about 9 years ago
Labels: bug

#134 - installation error on ubuntu 14.04

Issue - State: closed - Opened by thperret about 9 years ago - 1 comment
Labels: bug, packaging

#133 - [#130] documentation update

Pull Request - State: closed - Opened by thperret over 9 years ago - 1 comment

#132 - [#130] Doc website

Pull Request - State: closed - Opened by philouc over 9 years ago
Labels: documentation

#131 - [VEM] Use FreeEnergy as convergence criteria

Issue - State: closed - Opened by thperret over 9 years ago
Labels: new feature, optimization

#130 - Update documentation and website

Issue - State: closed - Opened by thperret over 9 years ago
Labels: cleanup, documentation, packaging

#129 - [Closes #122, Fixes #120] Fix convergence criteria, add load_contrasts_from_spm.mat

Pull Request - State: closed - Opened by thperret over 9 years ago

#128 - Autodetect number of available CPUs

Issue - State: closed - Opened by thperret over 9 years ago - 1 comment
Labels: new feature

#127 - Compute Posterior Probability Maps (PPM)

Issue - State: closed - Opened by thperret over 9 years ago
Labels: new feature

#126 - Optimize computation time

Issue - State: closed - Opened by thperret over 9 years ago
Labels: cleanup, optimization

#125 - [Closes #62] Doc jde outputs

Pull Request - State: closed - Opened by philouc over 9 years ago - 1 comment
Labels: documentation

#124 - [Closes #123] update .travis.yml file according to new travis-ci architecture

Pull Request - State: closed - Opened by thperret over 9 years ago

#123 - update travis-ci configuration file according to new architecture

Issue - State: closed - Opened by thperret over 9 years ago
Labels: packaging

#122 - add ability to load contrasts from SPM.mat file

Issue - State: closed - Opened by thperret over 9 years ago
Labels: new feature

#121 - Add constraint for HRF

Issue - State: closed - Opened by thperret over 9 years ago - 1 comment
Labels: new feature

#120 - Convergence criteria for VEM is not updated at each iteration

Issue - State: closed - Opened by thperret over 9 years ago
Labels: bug

#119 - block design for BOLD VEM

Issue - State: closed - Opened by ainafp over 9 years ago - 2 comments
Labels: bug, new feature, investigate

#118 - Part of unittests are not cleaning after running

Issue - State: closed - Opened by thperret over 9 years ago
Labels: cleanup, investigate

#117 - covariance matrix

Issue - State: closed - Opened by ainafp over 9 years ago - 3 comments
Labels: new feature, investigate

#116 - [Fix #115, Closes #110] Fix crashes when using VEM and add changelog to the repo

Pull Request - State: closed - Opened by thperret over 9 years ago - 1 comment

#115 - VEM algorithm is crashing

Issue - State: closed - Opened by thperret over 9 years ago
Labels: bug

#114 - [Closes #113] pyhrf.logger was over-written by wildcard import

Pull Request - State: closed - Opened by thperret over 9 years ago - 1 comment

#113 - Logging level is not set by command line

Issue - State: closed - Opened by thperret over 9 years ago
Labels: bug

#112 - Installation documentation

Pull Request - State: closed - Opened by thperret over 9 years ago

#111 - Move all code in developement into `labs` submodule

Issue - State: open - Opened by thperret over 9 years ago
Labels: cleanup, packaging

#110 - Add a changelog to the repository

Issue - State: closed - Opened by thperret over 9 years ago
Labels: packaging

#109 - Do two tests on travis-ci

Issue - State: open - Opened by thperret over 9 years ago - 2 comments
Labels: packaging

#108 - Replace python-graph-core breadth_first_search function by the one provided by scipy

Issue - State: open - Opened by thperret over 9 years ago
Labels: cleanup, optimization, investigate, packaging

#107 - [ci skip] Bump to version 0.4

Pull Request - State: closed - Opened by thperret over 9 years ago

#106 - [Closes #86, Closes #103, Closes #104] Remove snapshot scripts, fix for minimal dependencies and fix for matplolib non-interactive backend

Pull Request - State: closed - Opened by thperret over 9 years ago - 1 comment

GitHub / pyhrf/pyhrf issues and pull requests