project-monai/research-contributions issues and pull requests

#101 - Rename algo templates files and folders

Pull Request - State: closed - Opened by Nic-Ma about 2 years ago

#100 - Add algorithm templates (of SegResNet) to auto3dseg

Pull Request - State: closed - Opened by KumoLiu about 2 years ago - 1 comment

#100 - Add algorithm templates (of SegResNet) to auto3dseg

Pull Request - State: closed - Opened by KumoLiu about 2 years ago - 1 comment

#99 - Add algorithm templates (of SwinUNETR) to auto3dseg

Pull Request - State: closed - Opened by tangy5 about 2 years ago - 1 comment

#98 - Add algorithm templates (of DiNTS and SegResNet2d) to auto3dseg

Pull Request - State: closed - Opened by dongyang0122 about 2 years ago - 2 comments

#97 - Swin Transformer for 3D MRI Classification

Issue - State: open - Opened by almahdir1 about 2 years ago - 1 comment

#97 - Swin Transformer for 3D MRI Classification

Issue - State: open - Opened by almahdir1 about 2 years ago - 1 comment

#96 - Evaluation results are inconsistent during training and after saving the trained model

Issue - State: closed - Opened by Sharifmhamza about 2 years ago - 2 comments

#96 - Evaluation results are inconsistent during training and after saving the trained model

Issue - State: closed - Opened by Sharifmhamza about 2 years ago - 2 comments

#95 - SwinUNETR on BraTS 2020 T1c scans only

Issue - State: open - Opened by sander-boelders about 2 years ago - 6 comments

#95 - SwinUNETR on BraTS 2020 T1c scans only

Issue - State: open - Opened by sander-boelders about 2 years ago - 6 comments

#94 - Implementation details of finetuning Swin UNETR on BTCV

Issue - State: closed - Opened by hanoonaR about 2 years ago - 1 comment

#94 - Implementation details of finetuning Swin UNETR on BTCV

Issue - State: closed - Opened by hanoonaR about 2 years ago - 1 comment

#93 - Too many false positives on test-data using test.py

Issue - State: open - Opened by davidkvcs about 2 years ago

#93 - Too many false positives on test-data using test.py

Issue - State: open - Opened by davidkvcs about 2 years ago

#92 - Why use torch.multiprocessing.spawn for distributed training

Issue - State: open - Opened by hw-ju over 2 years ago - 9 comments

#92 - Why use torch.multiprocessing.spawn for distributed training

Issue - State: open - Opened by hw-ju over 2 years ago - 9 comments

#91 - Update ssl_head.py

Pull Request - State: closed - Opened by numanai over 2 years ago - 3 comments

#91 - Update ssl_head.py

Pull Request - State: closed - Opened by numanai over 2 years ago - 3 comments

#90 - Why dice scores mentioned in repository and paper are different?

Issue - State: closed - Opened by steve-seagal over 2 years ago - 1 comment

#90 - Why dice scores mentioned in repository and paper are different?

Issue - State: closed - Opened by steve-seagal over 2 years ago - 1 comment

#89 - fix: Swin-UNETR incompatible model keys from SSL pre-training to fine-tuning (#76)

Pull Request - State: closed - Opened by nvahmadi over 2 years ago - 2 comments

#89 - fix: Swin-UNETR incompatible model keys from SSL pre-training to fine-tuning (#76)

Pull Request - State: closed - Opened by nvahmadi over 2 years ago - 2 comments

#88 - Swin-UNETR SSL: bug-fixes and new features for "BYOD"

Pull Request - State: closed - Opened by nvahmadi over 2 years ago

#88 - Swin-UNETR SSL: bug-fixes and new features for "BYOD"

Pull Request - State: closed - Opened by nvahmadi over 2 years ago

#87 - Effect of flattening and reshaping

Issue - State: open - Opened by lweitkamp over 2 years ago - 2 comments

#87 - Effect of flattening and reshaping

Issue - State: open - Opened by lweitkamp over 2 years ago - 2 comments

#86 - How to calculate the classification index F1 score after multi category segmentation

Issue - State: open - Opened by BelieferQAQ over 2 years ago

#86 - How to calculate the classification index F1 score after multi category segmentation

Issue - State: open - Opened by BelieferQAQ over 2 years ago

#85 - Ask for the code for running Swin UNETR on MSD dataset

Issue - State: open - Opened by jiaomei222 over 2 years ago - 5 comments

#85 - Ask for the code for running Swin UNETR on MSD dataset

Issue - State: open - Opened by jiaomei222 over 2 years ago - 5 comments

#84 - update requirements.txt

Pull Request - State: closed - Opened by wyli over 2 years ago

#84 - update requirements.txt

Pull Request - State: closed - Opened by wyli over 2 years ago

#83 - Fix #82

Pull Request - State: closed - Opened by ardapekis over 2 years ago - 2 comments

#83 - Fix #82

Pull Request - State: closed - Opened by ardapekis over 2 years ago - 2 comments

#82 - SwinUNETR Pretraining ignores in_channels != 1 in reconstruction loss

Issue - State: closed - Opened by ardapekis over 2 years ago - 3 comments

#82 - SwinUNETR Pretraining ignores in_channels != 1 in reconstruction loss

Issue - State: closed - Opened by ardapekis over 2 years ago - 3 comments

#81 - Hf demo

Pull Request - State: open - Opened by darraghdog over 2 years ago

#81 - Hf demo

Pull Request - State: open - Opened by darraghdog over 2 years ago

#80 - UNETR Number of FLOPs is mismatched with ptflops

Issue - State: open - Opened by Amshaker over 2 years ago

#80 - UNETR Number of FLOPs is mismatched with ptflops

Issue - State: open - Opened by Amshaker over 2 years ago

#79 - Pretrained model on BTCV doesn't reproduce the mean dice score

Issue - State: open - Opened by zackchen-lb over 2 years ago - 2 comments

#79 - Pretrained model on BTCV doesn't reproduce the mean dice score

Issue - State: open - Opened by zackchen-lb over 2 years ago - 2 comments

#78 - [pre-commit.ci] pre-commit suggestions

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 2 years ago

#78 - [pre-commit.ci] pre-commit suggestions

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 2 years ago

#77 - Evaluation of trained UNETR models with test.py

Issue - State: closed - Opened by hanoonaR over 2 years ago - 1 comment

#77 - Evaluation of trained UNETR models with test.py

Issue - State: closed - Opened by hanoonaR over 2 years ago - 1 comment

#76 - Swin UNETR pretrained model weight has keys not compatible of load_from in fine-tuning task

Issue - State: open - Opened by upupming over 2 years ago - 2 comments

#76 - Swin UNETR pretrained model weight has keys not compatible of load_from in fine-tuning task

Issue - State: open - Opened by upupming over 2 years ago - 2 comments

#75 - fix: roi size

Pull Request - State: closed - Opened by upupming over 2 years ago

#75 - fix: roi size

Pull Request - State: closed - Opened by upupming over 2 years ago

#74 - fix: infer slide window size

Pull Request - State: closed - Opened by upupming over 2 years ago

#74 - fix: infer slide window size

Pull Request - State: closed - Opened by upupming over 2 years ago

#73 - Can you share the loss curve of the Swin-UNETR pre-training process

Issue - State: open - Opened by upupming over 2 years ago - 4 comments

#73 - Can you share the loss curve of the Swin-UNETR pre-training process

Issue - State: open - Opened by upupming over 2 years ago - 4 comments

#72 - DATASET Problem

Issue - State: open - Opened by BelieferQAQ over 2 years ago - 4 comments

#72 - DATASET Problem

Issue - State: open - Opened by BelieferQAQ over 2 years ago - 4 comments

#71 - main.py: error: unrecognized arguments: --fold=0

Issue - State: open - Opened by BelieferQAQ over 2 years ago - 5 comments

#71 - main.py: error: unrecognized arguments: --fold=0

Issue - State: open - Opened by BelieferQAQ over 2 years ago - 5 comments

#70 - Typo

Issue - State: closed - Opened by function2-llx over 2 years ago - 2 comments

#70 - Typo

Issue - State: closed - Opened by function2-llx over 2 years ago - 2 comments

#69 - Validation Accuracy on UNETR and Swin UNETR

Issue - State: closed - Opened by hanoonaR over 2 years ago - 3 comments

#69 - Validation Accuracy on UNETR and Swin UNETR

Issue - State: closed - Opened by hanoonaR over 2 years ago - 3 comments

#68 - Reproduce the Paper Results

Issue - State: open - Opened by mmaaz60 over 2 years ago - 3 comments

#68 - Reproduce the Paper Results

Issue - State: open - Opened by mmaaz60 over 2 years ago - 3 comments

#67 - test.py model_dict = torch.load(pretrained_pth)["state_dict"] gives error

Issue - State: open - Opened by davidkvcs over 2 years ago - 3 comments

#67 - test.py model_dict = torch.load(pretrained_pth)["state_dict"] gives error

Issue - State: open - Opened by davidkvcs over 2 years ago - 3 comments

#66 - Applying Swin UNETR to a new segmentation task

Issue - State: closed - Opened by charlesmoatti over 2 years ago - 2 comments

#66 - Applying Swin UNETR to a new segmentation task

Issue - State: closed - Opened by charlesmoatti over 2 years ago - 2 comments

#65 - update swin_unetr brats repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago - 2 comments

#65 - update swin_unetr brats repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago - 2 comments

#64 - Split of brain and spleen segmentation tasks in MSD dataset of UNETR

Issue - State: open - Opened by Zolento over 2 years ago

#64 - Split of brain and spleen segmentation tasks in MSD dataset of UNETR

Issue - State: open - Opened by Zolento over 2 years ago

#63 - SwinUNETR on BTCV with unused CLI arguments

Issue - State: closed - Opened by razorx89 over 2 years ago - 2 comments

#63 - SwinUNETR on BTCV with unused CLI arguments

Issue - State: closed - Opened by razorx89 over 2 years ago - 2 comments

#61 - add swin_unetr brats repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago - 1 comment

#61 - add swin_unetr brats repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago - 1 comment

#60 - The structure of dataset

Issue - State: closed - Opened by GhTara over 2 years ago - 2 comments

#60 - The structure of dataset

Issue - State: closed - Opened by GhTara over 2 years ago - 2 comments

#59 - About Pretraining Data Formats

Issue - State: open - Opened by WYC-321 over 2 years ago - 7 comments

#59 - About Pretraining Data Formats

Issue - State: open - Opened by WYC-321 over 2 years ago - 7 comments

#58 - number of parameters (model Swin UNETR)?

Issue - State: open - Opened by Tombery1 over 2 years ago - 5 comments

#58 - number of parameters (model Swin UNETR)?

Issue - State: open - Opened by Tombery1 over 2 years ago - 5 comments

#57 - added the pre trained weights and facial reconstruction results on another dataset

Pull Request - State: closed - Opened by Jianningli over 2 years ago

#57 - added the pre trained weights and facial reconstruction results on another dataset

Pull Request - State: closed - Opened by Jianningli over 2 years ago

#56 - Ask for the code for running Swin UNETR on BraTS dataset

Issue - State: closed - Opened by TanThinNguyen over 2 years ago - 2 comments

#56 - Ask for the code for running Swin UNETR on BraTS dataset

Issue - State: closed - Opened by TanThinNguyen over 2 years ago - 2 comments

#55 - add swin_unetr pretrain repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago

#55 - add swin_unetr pretrain repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago

#54 - update autoformatting

Pull Request - State: closed - Opened by wyli over 2 years ago

#54 - update autoformatting

Pull Request - State: closed - Opened by wyli over 2 years ago

#53 - add swin_unetr btcv repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago

#53 - add swin_unetr btcv repository

Pull Request - State: closed - Opened by ahatamiz over 2 years ago

#52 - rename master -> main

Pull Request - State: closed - Opened by wyli over 2 years ago

#52 - rename master -> main

Pull Request - State: closed - Opened by wyli over 2 years ago

#51 - rename 'master' to 'main'

Issue - State: closed - Opened by wyli over 2 years ago - 2 comments

#51 - rename 'master' to 'main'

Issue - State: closed - Opened by wyli over 2 years ago - 2 comments

#50 - About Pretrained Swin Encoder Model

Issue - State: closed - Opened by luoyixi924208423 over 2 years ago - 4 comments

#50 - About Pretrained Swin Encoder Model

Issue - State: closed - Opened by luoyixi924208423 over 2 years ago - 4 comments

#49 - update command version and code formatting

Pull Request - State: closed - Opened by wyli over 2 years ago - 1 comment

GitHub / project-monai/research-contributions issues and pull requests