Ecosyste.ms: Issues

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GitHub / prmiles/pymcmcstat issues and pull requests

#100 - Import Error

Issue - State: open - Opened by mcekwonu 4 months ago - 1 comment

#99 - Removing numpy casts

Issue - State: open - Opened by mwkury 8 months ago

#98 - FloatingPointError: divide by zero encountered in reciprocal

Issue - State: closed - Opened by XiaoyuHy almost 2 years ago - 1 comment

#97 - Using a log likelihood function in place of sos function

Issue - State: closed - Opened by isa-a almost 2 years ago - 1 comment

#96 - Can I get the vhb4910 data?

Issue - State: closed - Opened by Huzaifg almost 3 years ago - 2 comments
Labels: question

#95 - setting burnintime results in error when run with dram method

Issue - State: open - Opened by mikepab almost 4 years ago
Labels: bug

#94 - Closes #93 - removed extra dependencies

Pull Request - State: closed - Opened by prmiles almost 4 years ago - 1 comment

#93 - pymcmcstat has too many dependencies

Issue - State: closed - Opened by prmiles almost 4 years ago - 1 comment
Labels: bug, enhancement

#92 - Closes #90 - removed tutorial directory

Pull Request - State: closed - Opened by prmiles almost 4 years ago - 1 comment

#91 - Closes #86 - Added warning for sum-of-squares likelihood

Pull Request - State: closed - Opened by prmiles almost 4 years ago

#90 - Remove tutorials from main repository

Issue - State: closed - Opened by prmiles almost 4 years ago
Labels: enhancement

#89 - Closes #87 - fixed bug with matplotlib compatibility

Pull Request - State: closed - Opened by prmiles almost 4 years ago

#88 - Add matplotlib requirement

Pull Request - State: closed - Opened by prmiles about 4 years ago - 1 comment

#87 - Propagation module not working with matplotlib 3.3.3

Issue - State: closed - Opened by prmiles about 4 years ago - 2 comments
Labels: bug

#86 - Confusion regarding the "sstype" variable in propagation module

Issue - State: closed - Opened by prmiles about 4 years ago - 1 comment
Labels: enhancement, question

#85 - Merging v1.9.1 to master

Pull Request - State: closed - Opened by prmiles about 4 years ago - 1 comment

#84 - Closes #79 - chainstats display tolerancing

Pull Request - State: closed - Opened by prmiles about 4 years ago - 1 comment

#83 - Fixes #82 - initial value check shape

Pull Request - State: closed - Opened by prmiles about 4 years ago
Labels: bug

#81 - Running pymcmcstat using results from a previous run

Issue - State: closed - Opened by rayadastidar over 4 years ago - 2 comments

#80 - Update .travis.yml

Pull Request - State: closed - Opened by prmiles almost 5 years ago - 1 comment

#79 - Display Chain Stats number range

Issue - State: closed - Opened by nccreang about 5 years ago - 2 comments

#78 - add service for xvfb

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#77 - Update master branch to version 1.9.0

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#76 - Updated MCMC plots to maintain backwards to compatibility

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#75 - changed default interval limits to 95

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#74 - adddata feature

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#73 - Added 'allnames' feature to results (Fixes #71)

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#72 - Add mcmcplot

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#71 - Names of non-sampled parameters are not included in results structure

Issue - State: closed - Opened by prmiles over 5 years ago
Labels: enhancement

#70 - Feature to support propagation with models outputting matrix

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#69 - Added new propagation module (Fixed #55)

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#68 - Version 1.8.0

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#67 - Resolved #66 by added KDE objects to output

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#66 - Output KDE function from density panel plotting method

Issue - State: closed - Opened by prmiles over 5 years ago
Labels: enhancement

#65 - Improved methods for saving results

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#64 - Debug docs

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#63 - Updated internal naming conventions to follow Bayesian syntax

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#62 - added version attribute to docs

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#61 - Updated docs for Metropolis

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#60 - Resolved #51

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#59 - Removed zenodo reference

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#58 - Update paper to improve readability

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#57 - Update paper

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#56 - JOSS Paper Link

Issue - State: closed - Opened by katyhuff over 5 years ago - 2 comments

#55 - Streamline procedure for generating prediction intervals in post-processing

Issue - State: closed - Opened by prmiles over 5 years ago
Labels: enhancement

#54 - Added feature to display basic definitions of items in chainstats output

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#53 - Updated pairwise correlation and chain panel plotting routines

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#52 - Fixed #48

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#51 - Error message when defining limits

Issue - State: closed - Opened by prmiles over 5 years ago
Labels: enhancement

#50 - Update tutorials

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#49 - Add tutorials

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#48 - Pairwise plot kwarg does not work

Issue - State: closed - Opened by prmiles over 5 years ago
Labels: bug, enhancement

#47 - Update feature branch

Pull Request - State: closed - Opened by prmiles over 5 years ago

#46 - Update developmental branch with bug fixes from master

Pull Request - State: closed - Opened by prmiles over 5 years ago

#45 - Fixed #42 - Added contribution guidelines to repository

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#44 - updated how documentation reads the version number

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#43 - Fixes #41

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#42 - Add CONTRIBUTING.md

Issue - State: closed - Opened by djmitche over 5 years ago
Labels: enhancement

#41 - Prints version on import

Issue - State: closed - Opened by djmitche over 5 years ago - 2 comments
Labels: bug

#40 - Let user define prior and likelihood functions

Issue - State: open - Opened by prmiles over 5 years ago - 5 comments
Labels: enhancement

#39 - Parallel MCMC does not work on distributed memory systems

Issue - State: open - Opened by prmiles over 5 years ago
Labels: bug, enhancement

#38 - Changelog append

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#37 - added acceptance rate display feature - this closes #36

Pull Request - State: closed - Opened by prmiles over 5 years ago - 1 comment

#36 - Add acceptance rate display feature

Issue - State: closed - Opened by prmiles over 5 years ago - 1 comment
Labels: enhancement

#35 - Add paper

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#34 - Dev 1.7.0

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#33 - Output original covariance matrix

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#32 - Add sponsor to readme

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#31 - Cleanup test format

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#30 - Setup custom model

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#29 - Update link to pymcmcstat homepage

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#28 - Bring forward updates from master

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#27 - Added flake8 style check to CI

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#26 - Removed codacy badge

Pull Request - State: closed - Opened by prmiles almost 6 years ago - 1 comment

#25 - Add default args to cs

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#24 - removed ref to accepted attributed

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#23 - Fix cp folders

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#22 - Custom gibbs

Pull Request - State: closed - Opened by prmiles almost 6 years ago

#21 - Dev v1 6 0

Pull Request - State: closed - Opened by prmiles over 6 years ago

#20 - Cleanup code style

Pull Request - State: closed - Opened by prmiles over 6 years ago

#19 - Cleanup chain management

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#18 - Add parallel restart

Pull Request - State: closed - Opened by prmiles over 6 years ago

#17 - Setup noadaptind method

Pull Request - State: closed - Opened by prmiles over 6 years ago

#16 - Debug exp overflow

Pull Request - State: closed - Opened by prmiles over 6 years ago

#15 - Debug gelman rubin diagnostics

Pull Request - State: closed - Opened by prmiles over 6 years ago

#14 - Extend pi plotting control

Pull Request - State: closed - Opened by prmiles over 6 years ago

#13 - Test priorfun

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#12 - Create CODE_OF_CONDUCT.md

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#11 - Update issue templates

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#10 - v1.5.0rc2

Pull Request - State: closed - Opened by prmiles over 6 years ago

#9 - Update setup version requirements

Pull Request - State: closed - Opened by prmiles over 6 years ago

#8 - Update setup.py

Pull Request - State: closed - Opened by prmiles over 6 years ago

#7 - Debug docs

Pull Request - State: closed - Opened by prmiles over 6 years ago

#6 - Debug docs

Pull Request - State: closed - Opened by prmiles over 6 years ago

#5 - Switched back to coveralls badge for stability

Pull Request - State: closed - Opened by prmiles over 6 years ago

#4 - Update pi colors

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#3 - Fixed coverage badge by switching to shields.io

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#2 - prmiles cleanup docs

Pull Request - State: closed - Opened by prmiles over 6 years ago - 1 comment

#1 - update coverage

Pull Request - State: closed - Opened by prmiles over 6 years ago