polsys/ennemi issues and pull requests

#122 - Update PyPI publish script

Issue - State: open - Opened by polsys 6 months ago
Labels: maintenance

#121 - Raise minimum version requirement of pandas

Issue - State: open - Opened by polsys 6 months ago
Labels: maintenance

#120 - Add NumPy 2.0 to testing

Pull Request - State: closed - Opened by polsys 6 months ago
Labels: testing, maintenance

#119 - 1.4.0 release checklist

Issue - State: closed - Opened by polsys 9 months ago
Labels: meta

#118 - Add Python 3.12 to the test matrix

Issue - State: closed - Opened by polsys 9 months ago
Labels: testing

#117 - Add support for NumPy 2.0

Issue - State: closed - Opened by polsys 9 months ago
Labels: testing, maintenance

#116 - Enable pandas 2.0 in tests

Pull Request - State: closed - Opened by polsys over 1 year ago
Labels: testing, maintenance

#115 - Update Github Actions step versions

Pull Request - State: closed - Opened by polsys over 1 year ago
Labels: maintenance

#114 - Reorganize some documentation topics

Pull Request - State: closed - Opened by polsys over 1 year ago
Labels: documentation

#113 - Try running the tests with PyPy

Pull Request - State: closed - Opened by polsys over 1 year ago - 1 comment
Labels: testing, maintenance

#112 - Bump version and dependencies

Pull Request - State: closed - Opened by polsys over 1 year ago
Labels: maintenance

#111 - 1.3.0 release checklist

Issue - State: closed - Opened by polsys over 1 year ago
Labels: meta

#110 - Drop support for NumPy 1.19

Issue - State: closed - Opened by polsys almost 2 years ago
Labels: maintenance

#109 - Is there an option to choose the unit of mutual info?

Issue - State: closed - Opened by yzhang511 almost 2 years ago - 1 comment
Labels: documentation

#108 - Fix PyPI push script

Pull Request - State: closed - Opened by polsys about 2 years ago
Labels: maintenance

#107 - Minor CI and typechecking updates

Pull Request - State: closed - Opened by polsys about 2 years ago
Labels: maintenance

#106 - 1.2.1 release checklist

Issue - State: closed - Opened by polsys about 2 years ago
Labels: meta

#105 - Trying to submit package to conda-forge

Pull Request - State: closed - Opened by camaramm about 2 years ago - 6 comments
Labels: maintenance

#104 - Add `estimate_corr` and `pairwise_corr`

Pull Request - State: closed - Opened by polsys over 2 years ago

#103 - Bump version to 1.2.0

Pull Request - State: closed - Opened by polsys over 2 years ago

#102 - 1.2.0 release checklist

Issue - State: closed - Opened by polsys over 2 years ago
Labels: meta

#101 - Add `estimate_corr` and `pairwise_corr`

Issue - State: closed - Opened by polsys over 2 years ago
Labels: quality of life

#100 - Vectorize `discrete` parameter of `estimate_mi`

Issue - State: open - Opened by polsys over 2 years ago - 1 comment
Labels: quality of life

#99 - Warn on normalization with discrete data

Pull Request - State: closed - Opened by polsys over 2 years ago

#98 - 1.1.1 release checklist

Issue - State: closed - Opened by polsys over 2 years ago
Labels: meta

#97 - Warn when `discrete` and `normalization` both true

Issue - State: closed - Opened by polsys over 2 years ago
Labels: quality of life

#96 - Test with Python 3.10

Pull Request - State: closed - Opened by polsys over 2 years ago

#95 - Upgrade integration tests from Windows 2016

Issue - State: closed - Opened by polsys over 2 years ago
Labels: testing, maintenance

#94 - Typo in supported versions

Issue - State: closed - Opened by polsys about 3 years ago
Labels: bug, documentation

#93 - Migrate to newer Ubuntu image on integration tests

Issue - State: closed - Opened by polsys about 3 years ago
Labels: testing

#92 - Properly annotate DataFrame returns

Issue - State: open - Opened by polsys about 3 years ago - 1 comment
Labels: quality of life, testing

#91 - Add tutorial on discrete data

Pull Request - State: closed - Opened by polsys about 3 years ago - 1 comment

#90 - Add pandas test for discrete data

Issue - State: closed - Opened by polsys about 3 years ago
Labels: testing

#89 - Implement discrete MI estimation

Pull Request - State: closed - Opened by polsys about 3 years ago

#88 - Discrete (or mixed) conditions

Issue - State: open - Opened by polsys about 3 years ago
Labels: feature

#87 - Support discrete-discrete MI

Issue - State: closed - Opened by polsys about 3 years ago
Labels: feature

#86 - Make annotations backward-compatible

Pull Request - State: closed - Opened by polsys about 3 years ago
Labels: bug, maintenance

#85 - Update annotations for latest NumPy/mypy

Pull Request - State: closed - Opened by polsys about 3 years ago
Labels: testing, maintenance

#84 - Start 1.1 release cycle

Pull Request - State: closed - Opened by polsys over 3 years ago

#83 - 1.1.0 development cycle

Issue - State: closed - Opened by polsys over 3 years ago
Labels: meta

#82 - Remove beta status from docs

Pull Request - State: closed - Opened by polsys over 3 years ago
Labels: documentation

#81 - Update typing for NumPy 1.20

Pull Request - State: closed - Opened by polsys over 3 years ago

#80 - Adapt to LaTeX processor change on GitHub Pages

Pull Request - State: closed - Opened by polsys almost 4 years ago
Labels: bug, documentation

#79 - Add Python 3.9 to CI script

Pull Request - State: closed - Opened by polsys almost 4 years ago - 1 comment

#78 - Allow completely missing data when drop_nan=True

Issue - State: open - Opened by polsys about 4 years ago - 1 comment
Labels: quality of life

#77 - Fix minor issues for 1.0

Pull Request - State: closed - Opened by polsys about 4 years ago

#76 - Reconsider the eps-(1e-12) tweak in algorithms

Issue - State: open - Opened by polsys about 4 years ago
Labels: quality of life

#75 - Add discrete-continuous case to tutorial

Issue - State: closed - Opened by polsys about 4 years ago
Labels: documentation

#74 - 1.0.0 development cycle

Issue - State: closed - Opened by polsys about 4 years ago
Labels: meta

#73 - Automatic selection of k

Issue - State: open - Opened by polsys about 4 years ago
Labels: feature

#72 - Test the package without pandas

Issue - State: closed - Opened by polsys about 4 years ago
Labels: testing

#71 - Copy-edit the documentation

Pull Request - State: closed - Opened by polsys about 4 years ago

#70 - Add guide for MATLAB users

Issue - State: closed - Opened by polsys about 4 years ago - 1 comment
Labels: documentation

#69 - Add integration test for coupled Lorenz systems

Pull Request - State: closed - Opened by polsys about 4 years ago

#68 - Tweak the documentation layout a bit more

Pull Request - State: closed - Opened by polsys about 4 years ago

#67 - Add package build to CI script

Pull Request - State: closed - Opened by polsys about 4 years ago
Labels: testing, maintenance

#66 - Update documentation for beta1

Pull Request - State: closed - Opened by polsys about 4 years ago - 1 comment

#65 - Add integration tests for unbiasedness

Pull Request - State: closed - Opened by polsys about 4 years ago

#64 - Drop support for Python 3.6

Issue - State: closed - Opened by polsys about 4 years ago
Labels: maintenance, performance

#63 - Implement quality of life fixes

Pull Request - State: closed - Opened by polsys about 4 years ago - 1 comment

#62 - Implement data preprocessing

Pull Request - State: closed - Opened by polsys about 4 years ago

#61 - Consider lag for condition in pairwise_mi()

Issue - State: open - Opened by polsys about 4 years ago
Labels: quality of life

#60 - Implement discrete-continuous MI

Pull Request - State: closed - Opened by polsys about 4 years ago

#59 - Describe plan for future support

Issue - State: closed - Opened by polsys about 4 years ago
Labels: documentation, maintenance

#58 - Add useful code snippets

Issue - State: closed - Opened by polsys about 4 years ago
Labels: documentation

#57 - Improve parallelism implementation

Pull Request - State: closed - Opened by polsys about 4 years ago
Labels: breaking change

#56 - Replace naive grid by SciPy's N-dimensional tree

Pull Request - State: closed - Opened by polsys about 4 years ago

#54 - Add automatic data preprocessing

Issue - State: closed - Opened by polsys about 4 years ago - 1 comment
Labels: quality of life

#53 - Go through TODO comments

Issue - State: closed - Opened by polsys over 4 years ago
Labels: maintenance

#52 - Start 1.0.0beta1 development cycle

Pull Request - State: closed - Opened by polsys over 4 years ago

#51 - add license header per #47

Pull Request - State: closed - Opened by morrme over 4 years ago - 2 comments

#50 - Implement transfer entropy estimation

Issue - State: open - Opened by polsys over 4 years ago
Labels: feature

#49 - Test with Python 3.9

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: maintenance

#48 - Incorporate NumPy/SciPy into type checking

Issue - State: open - Opened by polsys over 4 years ago - 2 comments
Labels: maintenance

#47 - Add license header to each source file

Issue - State: closed - Opened by polsys over 4 years ago - 5 comments
Labels: documentation

#46 - Implement entropy estimation

Pull Request - State: closed - Opened by polsys over 4 years ago - 1 comment

#45 - Parallelize the entropy estimation

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: performance

#44 - Check if conditional entropy has estimation bias

Issue - State: closed - Opened by polsys over 4 years ago
Labels: quality of life, performance

#43 - Add API reference to documentation

Issue - State: closed - Opened by polsys over 4 years ago - 2 comments
Labels: documentation

#42 - Extend the test suite

Pull Request - State: closed - Opened by polsys over 4 years ago

#41 - Beta 1 development cycle

Issue - State: closed - Opened by polsys over 4 years ago
Labels: meta

#40 - Track Numba 0.51

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: performance

#39 - Implement initial support for Numba

Issue - State: closed - Opened by polsys over 4 years ago - 2 comments
Labels: performance

#38 - Extend the documentation and error messages

Pull Request - State: closed - Opened by polsys over 4 years ago

#37 - Support two-dimensional masks

Issue - State: open - Opened by polsys over 4 years ago - 1 comment
Labels: quality of life

#36 - Implement pairwise MI estimation

Pull Request - State: closed - Opened by polsys over 4 years ago

#35 - Go through docstrings

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: documentation

#34 - Start the 1.0.0alpha2 development cycle

Pull Request - State: closed - Opened by polsys over 4 years ago

#33 - Implement the algorithm in a compiled language

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: performance

#32 - Support the discrete-continuous case

Issue - State: closed - Opened by polsys over 4 years ago
Labels: feature

#30 - Support separate lags for each conditioning variable

Issue - State: closed - Opened by polsys over 4 years ago
Labels: quality of life

#29 - Add a method for progress visualization

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: quality of life

#28 - Add a case study to documentation

Issue - State: closed - Opened by polsys over 4 years ago
Labels: documentation

#27 - Add a CONTRIBUTING file

Issue - State: closed - Opened by polsys over 4 years ago
Labels: documentation

#26 - Add error message reference page

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: documentation

#25 - Consider support for Numba

Issue - State: closed - Opened by polsys over 4 years ago - 4 comments
Labels: performance

#24 - Add a CI leg with minimum requirements

Issue - State: closed - Opened by polsys over 4 years ago
Labels: testing

#23 - Add progress callbacks

Issue - State: closed - Opened by polsys over 4 years ago
Labels: quality of life

#22 - Improve the parallelism heuristics

Issue - State: closed - Opened by polsys over 4 years ago
Labels: performance

#21 - Do another profiling round

Issue - State: closed - Opened by polsys over 4 years ago - 1 comment
Labels: performance

GitHub / polsys/ennemi issues and pull requests