Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / poldracklab/fitlins issues and pull requests

#407 - Fail gracefully if Contrast specification is incorrect

Issue - State: open - Opened by adelavega 2 months ago
Labels: enhancement

#406 - Fail gracefully if no files found

Issue - State: open - Opened by adelavega 2 months ago - 1 comment
Labels: enhancement

#405 - Well -- the regular -- codespell support

Pull Request - State: open - Opened by yarikoptic 3 months ago

#404 - Build(deps): Bump actions/upload-artifact from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#403 - Build(deps): Bump github/codeql-action from 2 to 3

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#402 - Build(deps): Bump actions/download-artifact from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#401 - Build(deps): Bump actions/setup-python from 4 to 5

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#400 - Build(deps): Bump conda-incubator/setup-miniconda from 2 to 3

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#399 - Build(deps): Bump docker/login-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#398 - Build(deps): Bump docker/setup-buildx-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#397 - Build(deps): Bump docker/build-push-action from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#396 - Build(deps): Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#395 - Meta fix (addresses issue #290)

Pull Request - State: open - Opened by jmumford 11 months ago - 1 comment

#394 - What does fitlins assume about slice time correction?

Issue - State: open - Opened by monique2208 about 1 year ago - 2 comments

#393 - Build(deps): Bump docker/build-push-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#392 - Contrasts missing from report

Issue - State: open - Opened by jpiaszynski over 1 year ago - 1 comment

#391 - TypeError: unhashable type: 'list' in Loader

Issue - State: open - Opened by smeisler over 1 year ago - 6 comments

#390 - Regressor has extra item, causing mismatch

Issue - State: open - Opened by smeisler over 1 year ago - 8 comments

#389 - DOC: Add CIFTI usage to documentation

Pull Request - State: closed - Opened by smeisler over 1 year ago - 4 comments

#388 - Add CLI command to generate reports

Issue - State: open - Opened by adelavega almost 2 years ago - 4 comments
Labels: enhancement, reporting

#387 - FIX: Handle correct contrasts and intercepts being passed from PyBIDS

Pull Request - State: closed - Opened by effigies almost 2 years ago - 9 comments

#386 - CI: Add a build to test with unreleased pybids

Pull Request - State: closed - Opened by effigies almost 2 years ago - 2 comments

#385 - CI: Run nightly tests with pybids@master

Issue - State: closed - Opened by effigies almost 2 years ago

#384 - ReadTheDocs isn't building

Issue - State: closed - Opened by effigies almost 2 years ago - 5 comments

#383 - DX: Pin pybids 0.15.1

Pull Request - State: closed - Opened by effigies almost 2 years ago - 2 comments

#382 - DX: Try turning off _sync_kwargs on Factor

Pull Request - State: closed - Opened by effigies almost 2 years ago - 6 comments

#381 - ENH: Pare down entities

Pull Request - State: open - Opened by effigies almost 2 years ago - 2 comments

#380 - Handle cases where a contrast is missing from the first level

Issue - State: open - Opened by effigies almost 2 years ago - 4 comments
Labels: enhancement

#379 - How to model BIDS dataset with no trial type?

Issue - State: open - Opened by Remi-Gau about 2 years ago - 1 comment

#378 - DOC: Link out to BIDS Stats Models docs instead of maintaining our own

Pull Request - State: closed - Opened by Shotgunosine about 2 years ago - 8 comments

#377 - Fitlins should point to https://bids-standard.github.io/stats-models/

Issue - State: closed - Opened by Shotgunosine about 2 years ago
Labels: documentation

#376 - add github source links

Pull Request - State: closed - Opened by Shotgunosine about 2 years ago - 3 comments

#375 - Adding a section on estimators

Pull Request - State: closed - Opened by Shotgunosine about 2 years ago - 5 comments

#374 - Update test and example models to stats models 1.0

Issue - State: open - Opened by Shotgunosine about 2 years ago
Labels: documentation

#373 - Support for fsnative

Issue - State: open - Opened by smeisler about 2 years ago - 1 comment

#372 - Build(deps): Bump actions/setup-python from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#371 - --drop-missing still throws errors with missing regressors

Issue - State: open - Opened by smeisler about 2 years ago - 2 comments

#370 - Build(deps): Bump docker/login-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#369 - Build(deps): Bump docker/build-push-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#368 - Build(deps): Bump docker/setup-buildx-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#366 - Reports fail for models with only first-level analysis

Issue - State: open - Opened by shashankbansal6 about 2 years ago
Labels: bug

#365 - [WIP,ENH] Add FSL first level estimator

Pull Request - State: open - Opened by jdkent about 2 years ago - 1 comment

#364 - Update installation instructions

Issue - State: open - Opened by effigies about 2 years ago

#363 - PIN pybids 0.15.1

Pull Request - State: closed - Opened by adelavega about 2 years ago

#362 - Fetch DataLad datasets

Issue - State: open - Opened by adelavega about 2 years ago - 2 comments

#361 - Premade BIDS Database Error

Issue - State: open - Opened by smeisler about 2 years ago - 3 comments

#360 - Build(deps): Bump codecov/codecov-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#359 - Build(deps): Bump actions/upload-artifact from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments
Labels: dependencies

#358 - Build(deps): Bump actions/download-artifact from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#357 - Allow models with no name

Pull Request - State: closed - Opened by adelavega about 2 years ago - 4 comments

#356 - Reports fail if SM doesn't have a name

Issue - State: closed - Opened by adelavega about 2 years ago

#355 - RF: Fitlins output reorganization

Pull Request - State: closed - Opened by shashankbansal6 over 2 years ago - 2 comments

#354 - MNT: Use latest coverage

Pull Request - State: closed - Opened by effigies over 2 years ago - 1 comment

#353 - MNT: Remove unused packages from docker image

Pull Request - State: closed - Opened by effigies over 2 years ago

#352 - REL: 0.10.1

Pull Request - State: closed - Opened by effigies over 2 years ago - 1 comment

#351 - REL: 0.10.1

Pull Request - State: closed - Opened by adelavega over 2 years ago

#349 - Make output levels configurable

Issue - State: open - Opened by adelavega over 2 years ago
Labels: enhancement

#348 - TEST: Make sure that pytest runs without AFNI installed in environment

Issue - State: open - Opened by effigies over 2 years ago - 1 comment

#347 - Build(deps): Bump actions/cache from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#346 - BSM: run level model for 1 run per subject

Issue - State: closed - Opened by adelavega over 2 years ago - 3 comments

#345 - WIP: Consolidate check logic

Pull Request - State: closed - Opened by effigies over 2 years ago

#344 - CI: Comprehensive testing

Pull Request - State: closed - Opened by shashankbansal6 over 2 years ago - 1 comment

#343 - Build(deps): Bump actions/checkout from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#342 - Derivatives in Convolve and Lag Transform with error

Issue - State: open - Opened by sjshim over 2 years ago - 5 comments

#341 - ENH: Give informative error when Edge filters select no inputs

Issue - State: open - Opened by mateuszpawlik over 2 years ago - 5 comments

#340 - Build(deps): Bump actions/setup-python from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#339 - Update docs with material from Poldrack lab presentation

Issue - State: open - Opened by effigies over 2 years ago
Labels: documentation

#337 - Update bug_report.md

Pull Request - State: closed - Opened by adelavega over 2 years ago - 1 comment

#336 - No Docker Hub relase

Issue - State: closed - Opened by adelavega over 2 years ago - 6 comments

#335 - highpass filter flexibility

Issue - State: open - Opened by jmumford over 2 years ago

#334 - CI: Unify Docker deployment steps

Pull Request - State: closed - Opened by effigies over 2 years ago - 1 comment

#333 - TypeError: 'NoneType' object is not iterable

Issue - State: open - Opened by vogelbac over 2 years ago - 2 comments

#332 - CI: Check for secrets before deploying, switch to python-build

Pull Request - State: closed - Opened by effigies over 2 years ago

#331 - CI: Update ds003 tests

Pull Request - State: closed - Opened by effigies over 2 years ago - 1 comment

#330 - KeyError: 'trial_type'

Issue - State: closed - Opened by vogelbac over 2 years ago - 9 comments

#329 - ENH: Migrate CircleCI to github actions

Pull Request - State: closed - Opened by shashankbansal6 over 2 years ago - 2 comments

#328 - FIX: minor typo; missed restyling in afni.py

Pull Request - State: closed - Opened by shashankbansal6 over 2 years ago

#327 - ds003 example notebook issue

Issue - State: open - Opened by rwblair over 2 years ago
Labels: documentation

#326 - FIX: Minor fixes

Pull Request - State: closed - Opened by effigies over 2 years ago

#325 - Move to Brainsprite over glass brains

Issue - State: open - Opened by effigies over 2 years ago

#324 - Split design matrix reports from statistical map reports

Issue - State: open - Opened by effigies over 2 years ago
Labels: reporting

#323 - Disable intermediate statistical maps by default, re-enable with CLI flag

Issue - State: open - Opened by effigies over 2 years ago
Labels: reporting

#322 - FIX: Unreliable constant column name finding

Pull Request - State: closed - Opened by adelavega over 2 years ago - 3 comments

#321 - FIX: Constant name for afni

Pull Request - State: closed - Opened by adelavega over 2 years ago

#316 - STY: Reformat to black, address flake8 issues

Pull Request - State: closed - Opened by shashankbansal6 almost 3 years ago - 1 comment

#315 - Problem with regressors (h5 - sparse n/as)

Issue - State: open - Opened by karl-koschutnig almost 3 years ago - 4 comments

#314 - Review PR for #298

Pull Request - State: closed - Opened by effigies almost 3 years ago - 2 comments

#312 - ENH: Migrate CircleCI to github actions

Pull Request - State: closed - Opened by shashankbansal6 almost 3 years ago - 2 comments

#301 - Exclude res from report entities

Pull Request - State: closed - Opened by adelavega almost 3 years ago - 1 comment

#299 - Formalize output naming in the BIDS specification

Issue - State: open - Opened by HippocampusGirl almost 3 years ago - 5 comments

#298 - RF: Use the new bids stats model

Pull Request - State: closed - Opened by shashankbansal6 almost 3 years ago - 10 comments

#297 - timeseries versus regressors label expected in fmriprep output

Issue - State: open - Opened by arovai about 3 years ago - 2 comments

#294 - DOC: Update example models

Pull Request - State: closed - Opened by effigies about 3 years ago

#288 - REL: 0.9.1

Pull Request - State: closed - Opened by adelavega about 3 years ago - 2 comments

#283 - Security discussion: Codecov event

Issue - State: closed - Opened by effigies about 3 years ago - 2 comments

#282 - WIP: Pass design matrix per-level

Pull Request - State: closed - Opened by effigies over 3 years ago - 1 comment