poissonconsulting/ypr issues and pull requests

#74 - Installed help of package 'ypr' is corrupt

Issue - State: open - Opened by dunkenwg 21 days ago
Labels: Type: Bug, Difficulty: Advanced, Effort: Medium, Importance: High, Timeline: Now, zSkills: Software Development

#73 - Non-standard evaluation in ggplot2 calls causing NOTEs

Issue - State: open - Opened by joethorley 23 days ago
Labels: Type: Refactor, Difficulty: Intermediate, Effort: Small, Importance: High, Timeline: Now, zSkills: Software Development

#72 - Checking ypr

Pull Request - State: open - Opened by dunkenwg 25 days ago - 2 comments
Labels: Type: Bug, Difficulty: Advanced, Effort: Medium, Importance: High, Timeline: Now, zSkills: Software Development

#71 - docs: register poissontemplate usage

Pull Request - State: closed - Opened by maelle 26 days ago - 4 comments

#70 - aes_string()` is deprecated

Issue - State: open - Opened by joethorley over 1 year ago
Labels: Difficulty: Intermediate, Effort: Medium, Importance: High, Timeline: Soon

#69 - fix HTML attributes in docs

Pull Request - State: closed - Opened by evanamiesgalonski about 2 years ago

#68 - Add generation time to ypr

Issue - State: open - Opened by joethorley over 2 years ago

#67 - Implement `ypr_names<-` to allow renaming

Issue - State: open - Opened by joethorley over 2 years ago - 1 comment

#66 - Keep names constant when updating parameters for ecotypes

Issue - State: open - Opened by joethorley over 2 years ago

#65 - `as_ypr_ecotype()` easy way to combine two populations

Issue - State: open - Opened by aylapear over 2 years ago
Labels: Type: Feature

#64 - Rk values between 0 and 1 should be used to specify egg to tR survival

Issue - State: closed - Opened by joethorley over 2 years ago - 1 comment

#63 - Need to fix pkgdown list of functions

Issue - State: open - Opened by joethorley over 2 years ago

#62 - `ypr_tabulate_yield()` etc should have option to break out by ecotype (but same pi)

Issue - State: open - Opened by joethorley over 2 years ago
Labels: Difficulty: Advanced, Effort: Large, Importance: High, Timeline: Soon, Type: Feature

#61 - `ypr_update()` should allow vectors for parameters for ypr_populations and ypr_ecotypes

Issue - State: open - Opened by joethorley almost 3 years ago
Labels: Difficulty: Intermediate, Effort: Medium, Importance: Medium, Timeline: Soon, Type: Feature

#60 - Create yprdata to store data (as data frames)

Issue - State: closed - Opened by joethorley almost 3 years ago - 1 comment

#59 - Made changes to Actions using UsePois

Pull Request - State: closed - Opened by MowahidLatif almost 3 years ago

#58 - Classes should be ecotype -> population -> metapopulation with MCMC sampling

Issue - State: open - Opened by joethorley almost 3 years ago - 4 comments
Labels: Type: Refactor, Difficulty: Advanced, Effort: Large, Importance: High, Timeline: Soon, Type: Feature

#57 - Replace chk_population() with check_population() and export.

Issue - State: closed - Opened by joethorley almost 3 years ago

#56 - I think we need functions to create populations and ecotypes from a list of populations

Issue - State: closed - Opened by joethorley almost 3 years ago - 1 comment

#55 - double check ypr_tabulate_* outputs once complete

Issue - State: open - Opened by aylapear almost 3 years ago

#54 - update docs

Issue - State: open - Opened by aylapear almost 3 years ago - 2 comments
Labels: Type: Bug, Type: Docs, Difficulty: Simple, Effort: Small, Importance: Low, Timeline: Soon, Type: Feature

#53 - ypr_tabulate_yield add population name column to table

Issue - State: open - Opened by aylapear about 3 years ago
Labels: Difficulty: Simple, Effort: Medium, Importance: Low, Timeline: Soon, Type: Feature

#52 - adding myself as contributor

Pull Request - State: closed - Opened by aylapear about 3 years ago

#51 - package clean up

Pull Request - State: closed - Opened by aylapear about 3 years ago

#50 - update test-plot to use snapshots

Issue - State: closed - Opened by aylapear about 3 years ago - 1 comment
Labels: Effort: 2 Medium, Priority: 3 Medium, Difficulty: 1 Simple, Type: Testing

#49 - deprecate a level further

Issue - State: closed - Opened by aylapear about 3 years ago
Labels: Effort: 1 Low, Priority: 3 Medium, Type: Enhancement, Difficulty: 1 Simple

#48 - report.R file move text templating to usethis

Issue - State: closed - Opened by aylapear about 3 years ago
Labels: Effort: 1 Low, Priority: 3 Medium, Type: Enhancement, Difficulty: 1 Simple

#47 - pkgdown documentation

Pull Request - State: closed - Opened by nadinehussein over 3 years ago

#46 - cleaned up additional parameters

Pull Request - State: closed - Opened by nadinehussein over 3 years ago

#45 - lifecycle badge fix

Pull Request - State: closed - Opened by nadinehussein over 3 years ago

#44 - ypr parameter load from .csv fails

Issue - State: closed - Opened by PAskey over 4 years ago - 5 comments

#43 - Move scales and ggplot2 to suggests

Issue - State: closed - Opened by joethorley over 4 years ago
Labels: Difficulty: 2 Intermediate, Effort: 1 Low, Priority: 2 High, Type: Refactor

#42 - update vignette on calculations

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment

#41 - update print of ypr_populations so that distinguish all combinations versus unique

Issue - State: closed - Opened by joethorley almost 5 years ago

#40 - add ypr_update_populations() to bulk change

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment

#39 - need to check populations with expand = FALSE deletes identical populations

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment

#38 - add ypr_expand_populations() to expand populations to all combinations

Issue - State: closed - Opened by joethorley almost 5 years ago

#37 - use @describeIn to link instances of S3 classes to main definition

Issue - State: closed - Opened by joethorley almost 5 years ago
Labels: Difficulty: 2 Intermediate, Effort: 1 Low, Priority: 3 Medium, Type: Docs

#36 - move datasets to yprdata package

Issue - State: open - Opened by joethorley almost 5 years ago
Labels: Type: Refactor, Difficulty: Intermediate, Effort: Medium, Importance: High, Timeline: Soon

#35 - add option to `save = TRUE` and `knit = TRUE` `ypr_report()`

Issue - State: closed - Opened by joethorley almost 5 years ago - 2 comments

#34 - replace @seealso by @family

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment
Labels: Effort: 1 Low, Priority: 3 Medium, Type: Docs, Difficulty: 1 Simple

#33 - ypr_populations() errors if only one population defined

Issue - State: closed - Opened by joethorley almost 5 years ago - 2 comments

#32 - optimise for speed

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment

#31 - remove dependency on checkr (eventually)

Issue - State: closed - Opened by joethorley almost 5 years ago - 1 comment

#30 - new classes

Issue - State: closed - Opened by joethorley over 5 years ago - 1 comment
Labels: Difficulty: 3 Advanced, Effort: 3 High, Priority: 3 Medium, Type: Enhancement

#29 - set Lv and Ls to be 50

Issue - State: closed - Opened by joethorley over 5 years ago - 1 comment

#28 - see if define Lup to Inf

Issue - State: closed - Opened by joethorley over 5 years ago - 2 comments

#24 - add ypr_ecotypes

Issue - State: closed - Opened by joethorley over 5 years ago - 1 comment

#23 - add reference to DESCRIPTION

Issue - State: closed - Opened by joethorley almost 6 years ago

#21 - add calculation of Ne

Issue - State: open - Opened by joethorley about 6 years ago
Labels: Difficulty: Advanced, Effort: Medium, Importance: Medium, Timeline: Soon, Type: Feature