poisonalien/trackplot issues and pull requests

#44 - fix a bug when max(x$max) is the same as one of the breaks

Pull Request - State: open - Opened by ningbioinfo 18 days ago

#43 - track_overlay argument does not print peak signals as a scale on y-axis

Issue - State: open - Opened by kaanokay 2 months ago - 2 comments

#42 - How to set the data range of multiple tracks to be the same, similar to IGV?

Issue - State: open - Opened by zijunmeng 3 months ago

#41 - Add use_conda_env param and Fix mysql command bugs

Pull Request - State: open - Opened by rainoffallingstar 3 months ago

#40 - how to save the plot generated by track_plot

Issue - State: closed - Opened by lexie-lee 6 months ago - 2 comments

#39 - Issue in generating plot

Issue - State: open - Opened by Bioinfo9 7 months ago

#38 - Issue Encountered with Script Sourcing

Issue - State: closed - Opened by XuanrZhang 7 months ago - 4 comments

#37 - using a non-standard mouse genome build

Issue - State: open - Opened by jcm6t 8 months ago - 4 comments

#36 - Custom gene annotation - alternative to UCSC

Issue - State: closed - Opened by jcm6t 8 months ago - 2 comments

#35 - track_plot issues

Issue - State: open - Opened by murali0123 8 months ago - 1 comment

#34 - Highlight color alpha differs between tracks

Issue - State: open - Opened by SergioRodLla 10 months ago - 2 comments

#33 - Problem - Genomic Region Viewing Window

Issue - State: open - Opened by BolisLab 11 months ago - 3 comments

#32 - Function Structure Issue: 'track_plot' Error with No 'p' Argument

Issue - State: closed - Opened by BolisLab 11 months ago - 3 comments
Labels: bug

#31 - Support IGV.js browser sessions

Issue - State: open - Opened by PoisonAlien about 1 year ago
Labels: enhancement

#30 - Error in track_extract()

Issue - State: closed - Opened by h20gg702 about 1 year ago - 12 comments

#29 - Redefine chromHMM feature colors

Issue - State: closed - Opened by User06511-lab about 1 year ago - 4 comments

#28 - Issue with MySQL when accessing UCSC

Issue - State: closed - Opened by jsangalang about 1 year ago - 1 comment

#27 - Error in plot.window(...) : need finite 'ylim' values

Issue - State: closed - Opened by Sinevadada over 1 year ago - 1 comment

#26 - Error loading custom genome and gtf files

Issue - State: closed - Opened by PeterMulhair over 1 year ago - 2 comments

#25 - unused arguments

Issue - State: closed - Opened by Sinevadada over 1 year ago - 1 comment

#24 - can't install dependencies on MacOS 12.6.8

Issue - State: closed - Opened by Sinevadada over 1 year ago - 2 comments

#23 - Maximum track limit

Issue - State: closed - Opened by peterpdu over 1 year ago - 2 comments

#22 - Custom GTF

Issue - State: closed - Opened by peterpdu over 1 year ago - 2 comments

#21 - merge devel

Pull Request - State: closed - Opened by PoisonAlien over 1 year ago

#20 - Highlighting genomic loci from large coordinates

Issue - State: closed - Opened by ejc043 over 1 year ago - 1 comment

#19 - mysql cmd needs to be updated

Issue - State: closed - Opened by gabrielascui over 1 year ago - 1 comment

#18 - invalid unsigned integer: "4e+05"

Issue - State: closed - Opened by yikiii almost 2 years ago - 1 comment

#17 - show_ideogram errors

Issue - State: closed - Opened by ejc043 about 2 years ago - 1 comment

#16 - Source(trackplot.R) fails because of 'select' function for signature 'data.frame'

Issue - State: closed - Opened by gabrielascui over 2 years ago

#15 - Could not locate mysql.

Issue - State: closed - Opened by chenggang108 over 2 years ago - 4 comments

#14 - Plot multiple tracks overlaid

Issue - State: closed - Opened by dgoekbuget over 2 years ago - 1 comment
Labels: enhancement

#13 - highlight is not continue

Issue - State: closed - Opened by houruiyan almost 3 years ago

#12 - did not show transcription picture

Issue - State: closed - Opened by houruiyan almost 3 years ago - 1 comment

#11 - Collapsing transcripts..

Issue - State: closed - Opened by houruiyan almost 3 years ago - 4 comments

#10 - Trackplot cannot detect local installation of bwtools

Issue - State: closed - Opened by AlBaarS almost 3 years ago - 7 comments

#9 - issue about "Collapsing transcripts.."

Issue - State: closed - Opened by fjmuzengyiheng almost 3 years ago - 1 comment

#8 - run track_plot function but return NULL

Issue - State: closed - Opened by ChaoXu1997 about 3 years ago - 1 comment

#7 - use this in windows

Issue - State: closed - Opened by junjunlab over 3 years ago - 1 comment

#6 - Negative value scale

Issue - State: closed - Opened by dgoekbuget over 3 years ago - 4 comments

#5 - Custom scaling and smoothening enhancements

Issue - State: closed - Opened by ryanmboileau over 3 years ago - 8 comments

#4 - Averaging replicates and other mathematical operations

Issue - State: closed - Opened by dgoekbuget over 3 years ago - 6 comments
Labels: enhancement

#3 - object 'gtf' not found using track_plot function

Issue - State: closed - Opened by aspepin almost 4 years ago - 4 comments

#2 - R cannot locate bwtool - cannot run trackplot's functions

Issue - State: closed - Opened by aspepin almost 4 years ago - 2 comments

#1 - Error: object 'color_scheme' not found

Issue - State: closed - Opened by eyleencorrales about 4 years ago - 2 comments

GitHub / poisonalien/trackplot issues and pull requests