pipefunc/pipefunc issues and pull requests

#438 - ENH: Use `hatch` instead of `setuptools`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#437 - DOC: Fix admonition in example notebook

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#436 - DOC: Add a dropdown with interactive widget explanation

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#435 - MAINT: Sort the dependencies alphabetically

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#434 - CI: Test with plotting in uv now that `pygraphviz` is no longer required

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#433 - ENH: Remove pygraphviz dependency, was only used in matplotlib plotting backend

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#432 - TST: Fix pygraphviz <-> python-graphviz mixup in tests

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#431 - BUG: Fix Python≤3.11 case for `handle_error`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#430 - IndexError when handling exceptions without arguments in python<=3.11

Issue - State: closed - Opened by thoresma 3 months ago - 2 comments

#429 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago - 2 comments

#428 - MAINT: Install myst-nb with conda

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#427 - ENH: Avoid duplicate dependencies in `.github/update-environment.py` script

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#426 - ⬆️ Update astral-sh/setup-uv action to v4

Pull Request - State: closed - Opened by renovate[bot] 3 months ago - 2 comments
Labels: dependencies, github_actions, no-stale

#425 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago - 2 comments

#424 - ⬆️ Update codecov/codecov-action action to v5

Pull Request - State: closed - Opened by renovate[bot] 3 months ago - 2 comments
Labels: dependencies, github_actions, no-stale

#423 - ENH: Make the defaults node slightly different in plot

Pull Request - State: open - Opened by basnijholt 3 months ago - 2 comments

#422 - DOC: Fix `zarr` API docs page

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#421 - DOC: Add section with `dataclass` and `pydantic.BaseModel`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#420 - ENH: Add support for `pydantic.BaseModel`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#419 - MAINT: Remove `LazySequenceLearner` because of alternative in #381

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#418 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago - 2 comments

#417 - DOC: Add ultra-fast bullet point

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#416 - ENH: Allow using memory based storages in parallel too

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#415 - ENH: Factor out `SlurmExecutor` logic from `_run.py`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#414 - FIX: Also update progress bar for single executions

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#413 - ENH: Rename _submit_single to _execute_single to avoid confusion with ex.submit

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#412 - ENH: Allow non-parallel progress bar

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#411 - TST: Omit `pipefunc/map/_types.py` from coverage

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#410 - ENH: Make `executor` a dict internally always

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#409 - ENH: Prevent duplicates from `PipeFunc`s that return multiple

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#408 - ENH: Add a `StoreType`

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#407 - MAINT: Move `LazySequenceLearner` to separate module

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#406 - Define `ShapeDict`, `ShapeTuple`, `UserShapeDict` types

Pull Request - State: closed - Opened by basnijholt 3 months ago - 2 comments

#404 - ENH: Prevent adding functions with same `output_name`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#403 - ENH: Specially treat dataclasses with a default factory (closes #402)

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#401 - ENH: Update progress bar every second for first 30 seconds

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#398 - MAINT: Use relative imports in `pipefunc.map`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#397 - MAINT: pipefunc.map module reorganization

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#396 - MAINT: Move storage related modules to `map/_storage`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#395 - ENH: Allow using `adaptive_scheduler.SlurmExecutor`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#393 - Callback on each transition of a good way to visualize the result of each step beyond text

Issue - State: closed - Opened by ilykos 4 months ago - 3 comments

#391 - DOC: Fix url in shield

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#390 - CI: Rename GitHub Actions workflows and test with minimal dependencies

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#389 - ENH: Include class name in `PipeFunc.name`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#388 - TST: Make optional deps also optional in tests

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#386 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago - 2 comments

#385 - ENH: Add `LazySequenceLearner`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#384 - MAINT: Enable Python 3.13 in CI

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#383 - FIX: Use `internal_shapes` defined in `@pipefunc` in `create_learners`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#382 - Python 3.13 support

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#381 - ENH: Allow dynamically setting `internal_shapes`

Pull Request - State: closed - Opened by basnijholt 4 months ago - 3 comments

#380 - Featured at

Issue - State: open - Opened by basnijholt 4 months ago
Labels: documentation

#379 - DOC: Simplify example in README.md

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#378 - WIP: Split docs

Pull Request - State: open - Opened by basnijholt 4 months ago - 2 comments

#377 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago - 2 comments

#376 - ⬆️ Update mamba-org/setup-micromamba action to v2

Pull Request - State: closed - Opened by renovate[bot] 4 months ago - 2 comments
Labels: dependencies, github_actions, no-stale

#375 - kwargs are not checked for validity before running when using pipeline.run

Issue - State: open - Opened by evelyn-king 4 months ago - 2 comments
Labels: bug

#374 - Scoped pipelines cannot be nested

Issue - State: closed - Opened by evelyn-king 4 months ago - 3 comments
Labels: bug

#373 - MAINT: Move `ProgressTracker` widget a `_widgets` folder

Pull Request - State: closed - Opened by basnijholt 4 months ago - 2 comments

#372 - DOC: xarray CSS

Pull Request - State: open - Opened by basnijholt 4 months ago - 2 comments

#370 - DOC: More improvements

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#369 - DOC: Add `sphinx-notfound-page` for 404

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#368 - ENH: Allow pickling `DiskCache` without LRU Cache

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#367 - DOC: Use Ruff badge instead of Black

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#366 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago - 2 comments

#365 - ENH: Allow `range(...)` as input in `map`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#364 - DOC: Reorder and reorganize docs

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#363 - DOC: Improve intro in README

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#362 - DOC: New title and tag line

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#361 - DOC: Inline `mapspec` in physics based example

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#360 - DOC: Rely on latest release of MyST

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#359 - DOC: Add FAQ entry about mixing executors and storages

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#358 - DOC: Fix list formatting in Sphinx docs

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#357 - ENH: Allow a different `Executor` per `PipeFunc`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#356 - ENH: Allow setting a `storage` per `PipeFunc`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#355 - ENH: Fallback to serialization for cache keys

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#353 - ENH: Add more space between `:` and name in `visualize_graphviz`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#352 - ENH: Add `pipefunc.testing.patch`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#350 - MAINT: Remove trailing commas to have arg lists on single line

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#349 - ENH: Include mapspec axis in the outputs of `PipeFunc` directly

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#348 - ENH: Keep mapspec in argument nodes in `visualize_graphviz`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#347 - ENH: Raise an error with a helpful error message for missing dependencies

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#346 - ENH: Add optimized `FileArray.mask_linear`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#345 - CI: Remove unused steps from pytest pipeline

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#344 - ⬆️ Update astral-sh/setup-uv action to v3 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] 5 months ago - 2 comments
Labels: dependencies, github_actions, no-stale

#343 - TST: Add a CI pipeline that checks for matching doc-strings

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#342 - CI: Add UV based CI pipeline

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#341 - MAINT: use pygraphviz for plotting instead of python-graphviz

Pull Request - State: closed - Opened by basnijholt 5 months ago - 2 comments

#340 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago - 3 comments

#338 - TST: Add benchmark from FAQ to test suite

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#337 - ENH: Speedup code by 40% via simple change

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#336 - FIX: Load custom objects correctly in `xarray`

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#335 - DOC: Add FAQ question about overhead/performance

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#334 - ENH: Refactor `pipeline.map.run` to prepare for async implementation

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#333 - ENH: Add `pipeline.map_async` and a progress bar

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#332 - ENH: Improve missing plotting backend error message

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#331 - FIX: Improve the parallel store compatibility checking function

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#330 - ENH: Add `ray` integration

Pull Request - State: open - Opened by basnijholt 5 months ago - 3 comments

#329 - ENH: Make Graphviz PipeFunc nodes rounded

Pull Request - State: closed - Opened by basnijholt 5 months ago - 3 comments

#328 - Support ray

Issue - State: open - Opened by basnijholt 5 months ago
Labels: enhancement

GitHub / pipefunc/pipefunc issues and pull requests