Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / phenopolis/phenopolis_genomics_browser issues and pull requests
#51 - Integrate the native Flask logging library
Issue -
State: closed - Opened by priesgo over 4 years ago
- 4 comments
#51 - Integrate the native Flask logging library
Issue -
State: closed - Opened by priesgo over 4 years ago
- 4 comments
#50 - Demo database missing some new tables
Issue -
State: closed - Opened by priesgo over 4 years ago
- 5 comments
#50 - Demo database missing some new tables
Issue -
State: closed - Opened by priesgo over 4 years ago
- 5 comments
#49 - Replace PySAM with cyvcf2
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 6 comments
#49 - Replace PySAM with cyvcf2
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 6 comments
#48 - db: make all column names lower case
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#48 - db: make all column names lower case
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#47 - db: split variants table into internal and external annotations
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#47 - db: split variants table into internal and external annotations
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#46 - db create ids for each table
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#45 - endpoint to save/load filters
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#45 - endpoint to save/load filters
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: Python API
#44 - create new patient endpoint
Issue -
State: closed - Opened by pontikos over 4 years ago
- 7 comments
#44 - create new patient endpoint
Issue -
State: closed - Opened by pontikos over 4 years ago
- 7 comments
#43 - Reoganised and pylinted
Pull Request -
State: closed - Opened by IsmailM over 4 years ago
- 5 comments
#43 - Reoganised and pylinted
Pull Request -
State: closed - Opened by IsmailM over 4 years ago
- 5 comments
#42 - Reorganised and pylinted
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 1 comment
#42 - Reorganised and pylinted
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 1 comment
#40 - Use db session instead of file session #32
Pull Request -
State: closed - Opened by pontikos over 4 years ago
#40 - Use db session instead of file session #32
Pull Request -
State: closed - Opened by pontikos over 4 years ago
#39 - AWS: one RDS server instead of two
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 1 comment
#39 - AWS: one RDS server instead of two
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 1 comment
#38 - AWS: Add Code Pipeline for automatic deployment
Issue -
State: closed - Opened by IsmailM over 4 years ago
#38 - AWS: Add Code Pipeline for automatic deployment
Issue -
State: closed - Opened by IsmailM over 4 years ago
#37 - getting the API to start on new environment
Pull Request -
State: closed - Opened by priesgo over 4 years ago
- 1 comment
#37 - getting the API to start on new environment
Pull Request -
State: closed - Opened by priesgo over 4 years ago
- 1 comment
#36 - Emailing Errors
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 2 comments
#36 - Emailing Errors
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 2 comments
#35 - Alan dev
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 2 comments
#35 - Alan dev
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 2 comments
#34 - Alan dev
Pull Request -
State: closed - Opened by IsmailM over 4 years ago
- 1 comment
#34 - Alan dev
Pull Request -
State: closed - Opened by IsmailM over 4 years ago
- 1 comment
#33 - Docker version option
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 2 comments
#33 - Docker version option
Pull Request -
State: closed - Opened by alanwilter over 4 years ago
- 2 comments
#32 - Session should be stored in database
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 5 comments
#32 - Session should be stored in database
Issue -
State: closed - Opened by IsmailM over 4 years ago
- 5 comments
#31 - Create a dockerfile for phenolopolis_api
Issue -
State: closed - Opened by alanwilter over 4 years ago
- 1 comment
#31 - Create a dockerfile for phenolopolis_api
Issue -
State: closed - Opened by alanwilter over 4 years ago
- 1 comment
#30 - Check pysam==0.9 and werkzeug==0.16.0 requirements
Issue -
State: closed - Opened by alanwilter over 4 years ago
- 3 comments
#30 - Check pysam==0.9 and werkzeug==0.16.0 requirements
Issue -
State: closed - Opened by alanwilter over 4 years ago
- 3 comments
#29 - Matchmaker exchange phenotype
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: enhancement, Python API
#29 - Matchmaker exchange phenotype
Issue -
State: open - Opened by pontikos over 4 years ago
Labels: enhancement, Python API
#28 - #CHROM bug CHROM
Issue -
State: closed - Opened by pontikos over 4 years ago
- 3 comments
Labels: bug
#28 - #CHROM bug CHROM
Issue -
State: closed - Opened by pontikos over 4 years ago
- 3 comments
Labels: bug
#26 - https://phenopolis.org/hpo/Abnormal%20chorioretinal%20morphology
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
#26 - https://phenopolis.org/hpo/Abnormal%20chorioretinal%20morphology
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
#25 - https://phenopolis.org/variant/1-94511518-G-A very slow
Issue -
State: closed - Opened by pontikos about 5 years ago
- 2 comments
#25 - https://phenopolis.org/variant/1-94511518-G-A very slow
Issue -
State: closed - Opened by pontikos about 5 years ago
- 2 comments
#24 - implement user Management
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
Labels: Python API
#24 - implement user Management
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
Labels: Python API
#23 - user registration to replace demo account
Issue -
State: closed - Opened by pontikos about 5 years ago
- 19 comments
#23 - user registration to replace demo account
Issue -
State: closed - Opened by pontikos about 5 years ago
- 19 comments
#22 - Implement Analyses
Issue -
State: open - Opened by pontikos about 5 years ago
- 1 comment
Labels: Python API
#22 - Implement Analyses
Issue -
State: open - Opened by pontikos about 5 years ago
- 1 comment
Labels: Python API
#21 - implement hipaa compliant audit trail
Issue -
State: open - Opened by pontikos about 5 years ago
- 3 comments
Labels: enhancement, Python API
#21 - implement hipaa compliant audit trail
Issue -
State: open - Opened by pontikos about 5 years ago
- 3 comments
Labels: enhancement, Python API
#20 - store VCF file in db
Issue -
State: open - Opened by pontikos about 5 years ago
- 4 comments
Labels: Python API
#20 - store VCF file in db
Issue -
State: open - Opened by pontikos about 5 years ago
- 4 comments
Labels: Python API
#19 - move individual endpoint to sqlalchemy
Issue -
State: closed - Opened by pontikos about 5 years ago
- 4 comments
#19 - move individual endpoint to sqlalchemy
Issue -
State: closed - Opened by pontikos about 5 years ago
- 4 comments
#18 - Cannot currently edit patient
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
Labels: bug
#18 - Cannot currently edit patient
Issue -
State: closed - Opened by pontikos about 5 years ago
- 1 comment
Labels: bug
#17 - specify related individuals
Issue -
State: open - Opened by pontikos about 5 years ago
Labels: Python API
#17 - specify related individuals
Issue -
State: open - Opened by pontikos about 5 years ago
Labels: Python API
#16 - update fav.ico
Issue -
State: closed - Opened by pontikos about 5 years ago
#16 - update fav.ico
Issue -
State: closed - Opened by pontikos about 5 years ago
#15 - add endpoint for candidate variants and pubmed
Issue -
State: open - Opened by pontikos about 5 years ago
- 2 comments
Labels: Python API
#15 - add endpoint for candidate variants and pubmed
Issue -
State: open - Opened by pontikos about 5 years ago
- 2 comments
Labels: Python API
#14 - email errors to [email protected]
Issue -
State: closed - Opened by pontikos about 5 years ago
#14 - email errors to [email protected]
Issue -
State: closed - Opened by pontikos about 5 years ago
#13 - update patient information in try except finally clause
Pull Request -
State: closed - Opened by pontikos about 5 years ago
#13 - update patient information in try except finally clause
Pull Request -
State: closed - Opened by pontikos about 5 years ago
#12 - Missing genes from the database (gene C16orf80 and CFAP20)
Issue -
State: closed - Opened by pontikos about 5 years ago
- 9 comments
Labels: bug
#12 - Missing genes from the database (gene C16orf80 and CFAP20)
Issue -
State: closed - Opened by pontikos about 5 years ago
- 9 comments
Labels: bug
#11 - add /hpoApp/hpoMinGraph/hpo1,hpo2
Pull Request -
State: closed - Opened by logust79 over 5 years ago
#11 - add /hpoApp/hpoMinGraph/hpo1,hpo2
Pull Request -
State: closed - Opened by logust79 over 5 years ago
#10 - add /hpoApp/hpoMinGraph/hpo1,hpo2
Pull Request -
State: closed - Opened by logust79 over 5 years ago
- 1 comment
#10 - add /hpoApp/hpoMinGraph/hpo1,hpo2
Pull Request -
State: closed - Opened by logust79 over 5 years ago
- 1 comment
#9 - hard to setup dev
Issue -
State: closed - Opened by logust79 over 5 years ago
- 3 comments
#7 - merge master into dev
Pull Request -
State: closed - Opened by pontikos over 5 years ago
#5 - keep GQ and AD information in variant het and hom table
Issue -
State: open - Opened by pontikos almost 6 years ago
- 4 comments
Labels: Python API
#4 - handle gene synonyms in genes endpoint
Issue -
State: closed - Opened by pontikos almost 6 years ago
- 4 comments
Labels: bug
#3 - implement beacon api
Issue -
State: open - Opened by pontikos almost 6 years ago
Labels: TODO, Python API
#2 - Move all text to user config file to facilitate translation and customisation
Issue -
State: closed - Opened by pontikos almost 6 years ago
Labels: TODO
#1 - User config files
Issue -
State: closed - Opened by pontikos almost 6 years ago
Labels: TODO