Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / pharmpy/pharmpy issues and pull requests
#3120 - Bump dask from 2024.6.0 to 2024.6.1
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies
#3119 - Bump distributed from 2024.6.0 to 2024.6.1
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
- 2 comments
Labels: dependencies
#3118 - Bump pyright from 1.1.367 to 1.1.368
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies
#3117 - Bump psutil from 5.9.8 to 6.0.0
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies
#3116 - error for run_modelsearch
Issue -
State: closed - Opened by rosemarychen99 3 months ago
- 2 comments
#3115 - set_dataset() cannot use relative dataset path
Issue -
State: closed - Opened by rosemarychen99 3 months ago
- 5 comments
Labels: bug
#3114 - Bump urllib3 from 2.2.1 to 2.2.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3113 - run_amd bug
Issue -
State: closed - Opened by rosemarychen99 4 months ago
- 2 comments
#3112 - Clearer documentation of config-setup
Issue -
State: open - Opened by stellabelin 4 months ago
Labels: docs
#3111 - Not possible to have iiv-on-ruv on two DVs at the same time
Issue -
State: open - Opened by antoniaih 4 months ago
Labels: bug
#3110 - Bump dask from 2024.5.2 to 2024.6.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3109 - Bump distributed from 2024.5.2 to 2024.6.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3108 - Bump flake8 from 7.0.0 to 7.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3107 - Bump pycodestyle from 2.11.1 to 2.12.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3106 - Bump numpy from 1.26.4 to 2.0.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3105 - Bump fastjsonschema from 2.19.1 to 2.20.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3104 - Check if nmfe is available as part of the input validation
Issue -
State: open - Opened by rikardn 4 months ago
- 1 comment
Labels: enhancement
#3103 - FileNotFoundError: No path to NONMEM configured in pharmpy.conf and nmfe not in PATH
Issue -
State: open - Opened by Razan2512 4 months ago
- 8 comments
Labels: bug
#3102 - Wrong error model when using power after IIV on RUV
Issue -
State: open - Opened by antoniaih 4 months ago
Labels: bug
#3101 - Use MAT estimate if available when setting initial estimates for MDT
Issue -
State: open - Opened by rikardn 4 months ago
#3100 - Add PD MFLs to eq
Pull Request -
State: closed - Opened by antoniaih 4 months ago
#3099 - Error deleting temp directory when executing workflows on Windows
Issue -
State: open - Opened by stellabelin 4 months ago
#3098 - Raise proper error for NONMEM license file issues
Issue -
State: open - Opened by stellabelin 4 months ago
- 1 comment
#3097 - Bump filelock from 3.14.0 to 3.15.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3096 - Bump pyright from 1.1.366 to 1.1.367
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3095 - Example code produces error on Windows with conda
Issue -
State: closed - Opened by falkenhagen 4 months ago
- 6 comments
#3094 - How to allocate specified number of cpus while running in SLURM?
Issue -
State: open - Opened by eraimundez 4 months ago
- 3 comments
Labels: enhancement
#3093 - Bump more-itertools from 10.2.0 to 10.3.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3092 - Bump prompt-toolkit from 3.0.46 to 3.0.47
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3091 - Bump pkginfo from 1.11.0 to 1.11.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3090 - Bump packaging from 24.0 to 24.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3089 - Bump typing-extensions from 4.12.1 to 4.12.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3088 - Bump tornado from 6.4 to 6.4.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3087 - iivsearch: wrong output model
Issue -
State: open - Opened by rosemarychen99 4 months ago
- 1 comment
#3086 - Bump tox from 4.15.0 to 4.15.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3085 - Bump pyright from 1.1.365 to 1.1.366
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3084 - Bump pytest from 8.2.1 to 8.2.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3083 - Bump nodeenv from 1.9.0 to 1.9.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3082 - Bump prompt-toolkit from 3.0.45 to 3.0.46
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3081 - Bump zipp from 3.19.1 to 3.19.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3080 - Bump cryptography from 42.0.7 to 42.0.8
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3079 - Bump fsspec from 2024.5.0 to 2024.6.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3078 - error during run_amd
Issue -
State: open - Opened by rosemarychen99 4 months ago
- 1 comment
#3077 - Bump ipython from 8.24.0 to 8.25.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3076 - Bump pkginfo from 1.10.0 to 1.11.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3075 - Bump typing-extensions from 4.12.0 to 4.12.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3074 - Bump dask from 2024.5.1 to 2024.5.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3073 - Bump certifi from 2024.2.2 to 2024.6.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3072 - Bump zipp from 3.19.0 to 3.19.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3071 - Bump distributed from 2024.5.1 to 2024.5.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 2 comments
Labels: dependencies
#3070 - model search returns an error: All models fail the strictness criteria
Issue -
State: open - Opened by rosemarychen99 4 months ago
#3069 - Indexing argument in modeling functions
Issue -
State: open - Opened by JohanWBorg 4 months ago
#3068 - change index of appended estimation step function
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
#3067 - Empty results as input to tools is broken
Issue -
State: open - Opened by stellabelin 4 months ago
Labels: bug
#3066 - Bump requests from 2.32.2 to 2.32.3
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3065 - Bump sympy from 1.12 to 1.12.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3064 - Bump pyright from 1.1.364 to 1.1.365
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3063 - Add estimation option MCETA=1000 when linearizing model
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
#3062 - Bump jupyterlab-widgets from 3.0.10 to 3.0.11
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3061 - Bump prompt-toolkit from 3.0.44 to 3.0.45
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3060 - Bump nodeenv from 1.8.0 to 1.9.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3059 - Bump pydata-sphinx-theme from 0.15.2 to 0.15.3
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3058 - Bump ipywidgets from 8.1.2 to 8.1.3
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 2 comments
Labels: dependencies
#3057 - Bump widgetsnbextension from 4.0.10 to 4.0.11
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3056 - Add posterior_eta_type to EstimationStep
Pull Request -
State: open - Opened by JohanWBorg 4 months ago
#3055 - Bump prompt-toolkit from 3.0.43 to 3.0.44
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3054 - Add function to rename symbols in model
Issue -
State: open - Opened by stellabelin 4 months ago
Labels: enhancement
#3053 - Update mBIC implementation
Pull Request -
State: closed - Opened by stellabelin 4 months ago
#3052 - Allow to add IOV without IIV
Pull Request -
State: open - Opened by antoniaih 4 months ago
#3051 - Bump zipp from 3.18.2 to 3.19.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3050 - Bump scipy from 1.13.0 to 1.13.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3049 - Bump jupyter-client from 8.6.1 to 8.6.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3048 - Bump typing-extensions from 4.11.0 to 4.12.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3047 - Fix issue with create_report crashing for nlmixr models
Pull Request -
State: open - Opened by JohanWBorg 4 months ago
#3046 - Bump pyright from 1.1.363 to 1.1.364
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3045 - Creation of a dummy eta when removing all IIV etas
Issue -
State: closed - Opened by antoniaih 4 months ago
- 3 comments
Labels: bug
#3044 - Store input/final model within each tool
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
#3043 - Support linearization within IIVsearch
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
- 1 comment
#3042 - Bump requests from 2.32.1 to 2.32.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3041 - Use same rank type as input argument in bottom up algorithm in IIVSearch
Issue -
State: closed - Opened by stellabelin 4 months ago
#3040 - results.csv for pd.Series is bad
Issue -
State: open - Opened by rikardn 4 months ago
Labels: bug
#3039 - Use same rank type as input argument when comparing input and final model in IIVSearch
Issue -
State: closed - Opened by stellabelin 4 months ago
#3038 - Add comparison between input and final model as a step in IIVSearch
Issue -
State: closed - Opened by stellabelin 4 months ago
#3037 - Update nlmixr fitting
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
#3036 - Bump requests from 2.31.0 to 2.32.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3035 - covsearch: wrong final model is output in the result file
Issue -
State: closed - Opened by rosemarychen99 4 months ago
- 1 comment
#3034 - Avoid get_model_features in backwards search
Pull Request -
State: closed - Opened by JohanWBorg 4 months ago
#3033 - iivsearch json result summary tool missing information
Issue -
State: closed - Opened by rosemarychen99 4 months ago
- 4 comments
#3032 - Bump pytest from 8.2.0 to 8.2.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3031 - Bump distributed from 2024.5.0 to 2024.5.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
- 1 comment
Labels: dependencies
#3030 - Bump dask from 2024.5.0 to 2024.5.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3029 - Bump pytest-asyncio from 0.23.6 to 0.23.7
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#3028 - to add an timeout option for never-ending runs in the amd
Issue -
State: open - Opened by rosemarychen99 4 months ago
#3027 - Use new model database when running nlmixr
Pull Request -
State: closed - Opened by JohanWBorg 5 months ago
#3026 - Bump twine from 5.0.0 to 5.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies
#3025 - Bump zipp from 3.18.1 to 3.18.2
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies
#3024 - Restructure linearize tool
Pull Request -
State: closed - Opened by JohanWBorg 5 months ago
- 1 comment
#3023 - Bump fsspec from 2024.3.1 to 2024.5.0
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies
#3022 - Bump pyright from 1.1.362 to 1.1.363
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies
#3021 - Bump platformdirs from 4.2.1 to 4.2.2
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies