Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pharmpy/pharmpy issues and pull requests

#3443 - Bump patsy from 0.5.6 to 1.0.1

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3442 - Bump narwhals from 1.13.3 to 1.13.4

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3441 - The MFL transits nodepot is confusing

Issue - State: open - Opened by rikardn 3 months ago

#3440 - Split algorithms in IIVsearch documentation

Issue - State: open - Opened by stellabelin 3 months ago
Labels: docs

#3439 - Bump tomli from 2.0.2 to 2.1.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3438 - Bump jedi from 0.19.1 to 0.19.2

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3437 - Bump the dask group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3436 - Bad repr of pre-systemic circulation metabolite model

Issue - State: open - Opened by rikardn 3 months ago
Labels: bug

#3434 - Missing documentation for METABOLITE in mfl docs

Issue - State: open - Opened by rikardn 3 months ago
Labels: docs

#3433 - Bump packaging from 24.1 to 24.2

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3432 - Bump zipp from 3.20.2 to 3.21.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3431 - Bump narwhals from 1.13.2 to 1.13.3

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3430 - Bump the dask group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3429 - covsearch in AMD failed when IOV exists

Issue - State: closed - Opened by yahanhsutw 3 months ago

#3428 - Missing effects in adaptive scope reduction in Covsearch

Issue - State: open - Opened by stellabelin 3 months ago
Labels: bug

#3427 - Bump debugpy from 1.8.7 to 1.8.8

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3426 - Bump rpds-py from 0.20.1 to 0.21.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3425 - Bump pyright from 1.1.387 to 1.1.388

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3424 - Bump narwhals from 1.13.1 to 1.13.2

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies

#3422 - Exclude off-diagonals in RSE strictness criteria

Issue - State: open - Opened by stellabelin 3 months ago - 1 comment

#3421 - Use different initial estimate for indirect effect for degradation

Issue - State: closed - Opened by stellabelin 3 months ago - 2 comments

#3420 - Unreasonable initial value for pkpd modeling

Issue - State: open - Opened by rosemarychen99 3 months ago

#3419 - Bump rich from 13.9.3 to 13.9.4

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3418 - Bump narwhals from 1.12.1 to 1.13.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3417 - Bump numpy from 2.1.2 to 2.1.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3415 - Bump rpds-py from 0.20.0 to 0.20.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3414 - able to run modelsearch without results file

Issue - State: open - Opened by yahanhsutw 4 months ago

#3413 - Bump pyright from 1.1.386 to 1.1.387

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3412 - run_amd failed plotting vpc

Issue - State: closed - Opened by yahanhsutw 4 months ago - 3 comments
Labels: bug

#3411 - Bump bleach from 6.1.0 to 6.2.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3410 - Bump narwhals from 1.11.1 to 1.12.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3408 - run_amd for ivory

Issue - State: open - Opened by rosemarychen99 4 months ago

#3407 - Bump virtualenv from 20.27.0 to 20.27.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3406 - Bump narwhals from 1.10.0 to 1.11.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3403 - Bump narwhals from 1.10.0 to 1.11.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#3402 - Bump pip from 24.2 to 24.3.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3401 - Bump keyring from 25.4.1 to 25.5.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3400 - Bump ipython from 8.28.0 to 8.29.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3398 - Bump tinycss2 from 1.3.0 to 1.4.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3397 - Reinstate assert in is_strictness_fulfilled

Issue - State: open - Opened by rikardn 4 months ago
Labels: bug

#3396 - Bump pyright from 1.1.385 to 1.1.386

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3394 - Bump tox from 4.23.0 to 4.23.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3393 - Bump rich from 13.9.2 to 13.9.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3392 - Bump pydata-sphinx-theme from 0.15.4 to 0.16.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3391 - Risk of permission denied on multi user system

Issue - State: open - Opened by rikardn 4 months ago - 1 comment

#3390 - error with PKPD (unable to find dosing records in the dataset)

Issue - State: open - Opened by rosemarychen99 4 months ago - 1 comment

#3389 - `pharmpy.modeling.calculate_eps_shrinkage`

Issue - State: open - Opened by king-of-poppk 4 months ago - 7 comments
Labels: enhancement

#3388 - Bump networkx from 3.4.1 to 3.4.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3387 - Bump narwhals from 1.9.4 to 1.10.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3386 - the source nonmem file is changed after set_dataset

Issue - State: closed - Opened by rosemarychen99 4 months ago - 1 comment

#3385 - Bump cryptography from 43.0.1 to 43.0.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3384 - Bump markupsafe from 3.0.1 to 3.0.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3383 - Bump fsspec from 2024.9.0 to 2024.10.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3382 - Bump statsmodels from 0.14.2 to 0.14.4

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3381 - Error for PKPD search space

Issue - State: open - Opened by rosemarychen99 4 months ago - 2 comments
Labels: bug

#3380 - pkpd error

Issue - State: closed - Opened by rosemarychen99 4 months ago - 2 comments
Labels: bug

#3379 - Model gets stored twice in database if type is generic

Issue - State: open - Opened by stellabelin 4 months ago
Labels: bug

#3377 - Bump tox from 4.22.0 to 4.23.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3376 - Bump narwhals from 1.9.3 to 1.9.4

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3375 - Bump psutil from 6.0.0 to 6.1.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3374 - Bump virtualenv from 20.26.6 to 20.27.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3373 - Bump the dask group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3372 - Bump pyright from 1.1.384 to 1.1.385

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3371 - Bump tox from 4.21.2 to 4.22.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3370 - First Version of SAMBA approach

Pull Request - State: closed - Opened by pengmanhht 4 months ago

#3369 - Bump networkx from 3.4 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3368 - Bump sphinx from 8.0.2 to 8.1.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#3367 - Bump cloudpickle from 3.0.0 to 3.1.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3366 - Bump narwhals from 1.9.2 to 1.9.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3365 - Bump sphinx from 8.0.2 to 8.1.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago - 1 comment
Labels: dependencies

#3364 - Bump debugpy from 1.8.6 to 1.8.7

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3363 - Bump networkx from 3.3 to 3.4

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3362 - Bump pkginfo from 1.11.1 to 1.11.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3361 - Bump distlib from 0.3.8 to 0.3.9

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3360 - Bump check-manifest from 0.49 to 0.50

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3359 - Bump charset-normalizer from 3.3.2 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3358 - Bump pyright from 1.1.383 to 1.1.384

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3357 - Bump narwhals from 1.9.1 to 1.9.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3356 - Bump sphinx-tabs from 3.4.5 to 3.4.7

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3355 - Bump markupsafe from 3.0.0 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3354 - Bump jsonschema-specifications from 2023.12.1 to 2024.10.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3353 - New tool for strictness and ranking

Issue - State: open - Opened by rikardn 4 months ago
Labels: enhancement

#3352 - Bump markupsafe from 2.1.5 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3351 - Bump black from 24.8.0 to 24.10.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3350 - Bump numpy from 2.1.1 to 2.1.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3349 - Bump rich from 13.9.1 to 13.9.2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3348 - Bump narwhals from 1.9.0 to 1.9.1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3347 - Bump build from 1.2.2 to 1.2.2.post1

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3346 - Bump toolz from 0.12.1 to 1.0.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#3345 - Add seed-attribute to ExecutionStep

Issue - State: open - Opened by stellabelin 5 months ago

#3344 - Bump tox from 4.21.1 to 4.21.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies