Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pharmpy/pharmpy issues and pull requests

#1758 - Bump altair from 4.2.2 to 5.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#1754 - Better handling of case to only test solvers in estmethod tool

Issue - State: open - Opened by rikardn over 1 year ago - 1 comment
Labels: bug

#1752 - Bump nbclient from 0.7.4 to 0.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#1751 - Bump requests from 2.30.0 to 2.31.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#1750 - Bump fastjsonschema from 2.17.0 to 2.17.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#1748 - Bump fastjsonschema from 2.16.3 to 2.17.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#1747 - Raise when parameter in NONMEM model doesn't have record

Issue - State: open - Opened by stellabelin almost 2 years ago
Labels: bug

#1746 - Bump docutils from 0.19.0 to 0.20.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1745 - Add covariance method as dimension to estmethod

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1744 - Improve iivsearch to handle PD parameters

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1743 - Structural model search tool for PKPD models

Issue - State: closed - Opened by rikardn almost 2 years ago - 2 comments
Labels: enhancement

#1742 - Create transformation function for indirect response PD models

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1741 - Create a transformation for effect compartment PD models

Issue - State: open - Opened by rikardn almost 2 years ago
Labels: enhancement

#1740 - Create a transformation function for direct effect PD models

Issue - State: open - Opened by rikardn almost 2 years ago
Labels: enhancement

#1739 - Bump ipykernel from 6.23.0 to 6.23.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1738 - Estmethod – solvers

Issue - State: open - Opened by leiwolfm almost 2 years ago - 3 comments

#1737 - Save alias for variable names

Issue - State: open - Opened by JohanWBorg almost 2 years ago
Labels: enhancement

#1736 - Add function list_categories for a variable

Issue - State: open - Opened by rikardn almost 2 years ago
Labels: enhancement

#1735 - Handle mismatch in column names between datainfo and dataset

Issue - State: open - Opened by stellabelin almost 2 years ago - 1 comment
Labels: enhancement

#1734 - Add occasion column check

Issue - State: open - Opened by stellabelin almost 2 years ago - 1 comment
Labels: enhancement

#1733 - Bump distributed from 2023.4.1 to 2023.5.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1732 - Bump tornado from 6.3.1 to 6.3.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1731 - Bump dask from 2023.4.1 to 2023.5.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1730 - Bump sphinx from 7.0.0 to 7.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1729 - Bump platformdirs from 3.5.0 to 3.5.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1728 - Bump sympy from 1.11.1 to 1.12

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1727 - sphinx is blocking latest docutils

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: dependencies

#1725 - Add instructions how to read in results json

Issue - State: closed - Opened by stellabelin almost 2 years ago - 1 comment
Labels: docs

#1724 - Bump docutils from 0.19.0 to 0.20

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1723 - Bump altair from 4.2.2 to 5.0.0

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1722 - Model code changed using fit

Issue - State: closed - Opened by kevin199011 almost 2 years ago - 2 comments

#1721 - Bump ipykernel from 6.22.0 to 6.23.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1720 - Bump nbconvert from 7.3.1 to 7.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1719 - Bump tflite-runtime from 2.5.0.post1 to 2.12.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1718 - Support for ALAG in nlmixr/rxode

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago

#1717 - Bump fsspec from 2023.4.0 to 2023.5.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1716 - Bump certifi from 2022.12.7 to 2023.5.7

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1715 - Conversion tool update

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 1 comment

#1714 - Allow specification of admids

Issue - State: open - Opened by rikardn almost 2 years ago
Labels: enhancement

#1713 - Autogenerate CMT column when needed for NONMEM

Issue - State: closed - Opened by rikardn almost 2 years ago - 2 comments
Labels: enhancement

#1712 - Create IV+Oral start model

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1711 - Bump ipython from 8.13.1 to 8.13.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1710 - Bump requests from 2.29.0 to 2.30.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1709 - Develop structsearch for metabolite models

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1708 - Rescaled logit for iiv etas

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment

#1707 - Update add_metabolite function

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: enhancement

#1706 - Bump urllib3 from 1.26.15 to 2.0.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1705 - Bioavailability fixes and updates to conversion tool

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 1 comment

#1704 - Bump ipython from 8.12.0 to 8.13.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1703 - Bump distributed from 2023.4.0 to 2023.4.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1702 - Bump sphinx from 6.2.1 to 7.0.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1701 - Bump dask from 2023.4.0 to 2023.4.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1700 - Bump urllib3 from 1.26.15 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1699 - Standard deviation for model is set to 0

Issue - State: open - Opened by stellabelin almost 2 years ago - 3 comments
Labels: bug

#1698 - Bump platformdirs from 3.4.0 to 3.5.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1697 - Bump rich from 13.3.4 to 13.3.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1696 - urllib3 2.0.0 cannot be used together with requests

Issue - State: closed - Opened by rikardn almost 2 years ago
Labels: dependencies

#1695 - Bump platformdirs from 3.3.0 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1694 - Bump requests from 2.28.2 to 2.29.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1693 - Bump urllib3 from 1.26.15 to 2.0.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1692 - residual power model should perhaps have IPRED only once

Issue - State: open - Opened by rikardn almost 2 years ago

#1691 - print_model_diff is confusing

Issue - State: open - Opened by rikardn almost 2 years ago

#1689 - Number of warnings in model table does not match summary_errors

Issue - State: open - Opened by rikardn almost 2 years ago
Labels: bug

#1688 - ruvsearch stops if best proxy-model fails on nlme-side

Issue - State: open - Opened by rikardn almost 2 years ago

#1687 - Bump platformdirs from 3.2.0 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1686 - Bump nbclient from 0.7.3 to 0.7.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1685 - Bump sphinx from 6.1.3 to 6.2.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1684 - Bump pandas from 1.5.3 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#1683 - Having $TABLE property

Issue - State: open - Opened by OmarAshkar almost 2 years ago - 3 comments
Labels: enhancement

#1682 - Correction of ODE parsing and $DES assignment statements

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 2 comments

#1681 - Bump sphinx from 6.1.3 to 6.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1680 - Bump numpy from 1.24.2 to 1.24.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1679 - Bump tornado from 6.3 to 6.3.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1678 - Bump importlib-metadata from 6.5.0 to 6.6.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1677 - Wait for workflow action not working

Issue - State: open - Opened by stellabelin almost 2 years ago
Labels: dx

#1676 - Handle mixed case symbols in NONMEM models

Issue - State: open - Opened by rikardn almost 2 years ago

#1675 - Bump importlib-metadata from 6.4.1 to 6.5.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1674 - Bump pygments from 2.15.0 to 2.15.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1673 - Bump tornado from 6.1 to 6.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1672 - RxODE converter

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 2 comments

#1671 - Describe `results` option in AMD tool input documentation

Issue - State: closed - Opened by stellabelin almost 2 years ago - 1 comment
Labels: docs

#1670 - Bump psutil from 5.9.4 to 5.9.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1669 - Bump zict from 2.2.0 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1668 - Bump soupsieve from 2.4 to 2.4.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1667 - Bump importlib-metadata from 6.3.0 to 6.4.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1666 - Bump attrs from 22.2.0 to 23.1.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1665 - Bump dask from 2023.3.2 to 2023.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1664 - Bump distributed from 2023.3.2.1 to 2023.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1663 - RxODE conversion

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 1 comment

#1662 - Update to nlmixr conversion tool

Pull Request - State: closed - Opened by JohanWBorg almost 2 years ago - 1 comment

#1661 - Bump jupyter-client from 7.3.4 to 8.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#1660 - Bump packaging from 23.0 to 23.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1659 - Bump rich from 13.3.3 to 13.3.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1658 - Bump partd from 1.3.0 to 1.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1657 - Problems reading in old results.json using pandas 2.0.0

Issue - State: closed - Opened by rikardn almost 2 years ago - 1 comment
Labels: dependencies

#1656 - Bump importlib-metadata from 6.1.0 to 6.3.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#1655 - Bump nbconvert from 7.3.0 to 7.3.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies