Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / pharmpy/pharmpy issues and pull requests
#2182 - Drug metabolite default search space and correct candidate models
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
#2181 - Implement user specified strictness filtering #2053
Pull Request -
State: open - Opened by antoniaih about 1 year ago
- 1 comment
#2180 - Use ModelEntry in structsearch
Issue -
State: closed - Opened by stellabelin about 1 year ago
Labels: dx
#2179 - Use ModelEntry in ruvsearch
Issue -
State: closed - Opened by stellabelin about 1 year ago
Labels: dx
#2178 - Use ModelEntry in modelsearch
Issue -
State: closed - Opened by stellabelin about 1 year ago
Labels: dx
#2177 - Use ModelEntry in modelfit
Issue -
State: closed - Opened by stellabelin about 1 year ago
- 1 comment
Labels: dx
#2176 - Use ModelEntry in iovsearch
Issue -
State: closed - Opened by stellabelin about 1 year ago
Labels: dx
#2175 - Use ModelEntry in iivsearch
Issue -
State: open - Opened by stellabelin about 1 year ago
Labels: dx
#2174 - Use ModelEntry in estmethod
Issue -
State: open - Opened by stellabelin about 1 year ago
Labels: dx
#2173 - Use ModelEntry in covsearch
Issue -
State: closed - Opened by stellabelin about 1 year ago
- 1 comment
Labels: dx
#2172 - Use ModelEntry in Bootstrap
Issue -
State: open - Opened by stellabelin about 1 year ago
Labels: dx
#2171 - Use ModelEntry in AMD
Issue -
State: closed - Opened by stellabelin about 1 year ago
Labels: dx
#2170 - Bump bleach from 6.0.0 to 6.1.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2169 - Bump markdown from 3.4.4 to 3.5
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2168 - parent_model in structsearch should be start_model without start_model being in the results
Issue -
State: open - Opened by antoniaih about 1 year ago
Labels: enhancement
#2167 - Bump nbconvert from 7.9.1 to 7.9.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2166 - Bump rpds-py from 0.10.3 to 0.10.4
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2165 - add final_model to AMD results
Issue -
State: open - Opened by antoniaih about 1 year ago
Labels: enhancement
#2164 - Bump tflite-runtime from 2.5.0.post1 to 2.14.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#2163 - Bump nbconvert from 7.8.0 to 7.9.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2162 - Extend docstring for transform_blq
Pull Request -
State: open - Opened by antoniaih about 1 year ago
- 1 comment
#2161 - Parameter naming error when going from 1 to 10 transits
Issue -
State: open - Opened by stellabelin about 1 year ago
- 9 comments
Labels: bug
#2160 - Networkx error when adding a transit to a model with transits
Issue -
State: open - Opened by stellabelin about 1 year ago
Labels: bug
#2159 - Fix issues in structsearch for tmdd models
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
#2158 - Bump tflite-runtime from 2.5.0.post1 to 2.14.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#2157 - Bump babel from 2.12.1 to 2.13.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2156 - Bump traitlets from 5.10.1 to 5.11.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2155 - Bump altair from 5.1.1 to 5.1.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2154 - Add covariate extraction to get_model_features()
Issue -
State: open - Opened by JohanWBorg about 1 year ago
Labels: enhancement
#2153 - Add argument for prioritized/mechanical covariates in AMD
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
Labels: enhancement
#2152 - Allow for mandatory/optional covariates in MFL using "?"
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
Labels: enhancement
#2151 - Implement covariates within ModelFeatures class + covsearch
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
Labels: enhancement
#2150 - Dissallow combination of absorption INST and LAGTIME/TRANSITS
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
#2149 - Fix least number of transformations for transits
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2148 - Only index models with results not None in summary_models
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2147 - Fix frozenmapping issue
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 2 comments
#2146 - Calculate the correct BIC for drug metabolite
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2145 - Error when creating report on cluster
Issue -
State: closed - Opened by rikardn about 1 year ago
- 1 comment
Labels: bug
#2144 - Bump platformdirs from 3.10.0 to 3.11.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2143 - Bump jedi from 0.19.0 to 0.19.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2142 - Bump ipython from 8.16.0 to 8.16.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2141 - Bump urllib3 from 2.0.5 to 2.0.6
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2140 - Fix structsearch
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
#2139 - Bump mistune from 3.0.1 to 3.0.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2138 - Bump stack-data from 0.6.2 to 0.6.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2137 - Bump executing from 1.2.0 to 2.0.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2136 - Bump rich from 13.5.3 to 13.6.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2135 - Bump dask from 2023.9.2 to 2023.9.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#2134 - Bump wcwidth from 0.2.7 to 0.2.8
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2133 - Bump fastjsonschema from 2.18.0 to 2.18.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2132 - Bump distributed from 2023.9.2 to 2023.9.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#2131 - Bump ipython from 8.15.0 to 8.16.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2130 - Bump packaging from 23.1 to 23.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2129 - Bump charset-normalizer from 3.2.0 to 3.3.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2128 - pharmr fails to find nmfe script for nonmem
Issue -
State: open - Opened by Eliford about 1 year ago
- 12 comments
#2127 - Enable TMDD for structsearch
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
#2126 - Remove all non-linear eliminations from default search spaces
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2125 - Correct drug metabolite filtration
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
#2124 - Change LCfree to LAfree
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
#2123 - Enable `_parse_modelfit_results` to parse models with `$DESIGN`
Pull Request -
State: closed - Opened by vrognas about 1 year ago
- 1 comment
#2122 - Changes to Wagner and QSS TMDD models
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
#2121 - Move results to workflows
Pull Request -
State: closed - Opened by stellabelin about 1 year ago
- 1 comment
#2118 - Add `test_parse_multiple_problem`
Issue -
State: open - Opened by vrognas about 1 year ago
Labels: dx
#2117 - Remove all eliminations except first order from the default search space in amd
Issue -
State: closed - Opened by rikardn about 1 year ago
- 1 comment
#2116 - Updated documentation for iv+oral
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 2 comments
#2115 - Updated MFL- and modelsearch docs
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 2 comments
#2114 - Update structsearch documentation
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2113 - Enable search_space for structsearch in AMD
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 2 comments
#2112 - MFL for structsearch in AMD
Issue -
State: closed - Opened by antoniaih about 1 year ago
Labels: bug
#2111 - Refactor `_parse_table`
Pull Request -
State: closed - Opened by vrognas about 1 year ago
- 1 comment
#2110 - Bump jupyter-core from 5.3.1 to 5.3.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2109 - Bump scipy from 1.11.2 to 1.11.3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2108 - Fix docstrings for PD models. Additive -> Proportional
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
#2107 - Add documentation for structsearch for PKPD
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
#2106 - Change docstrings for PKPD model transformations
Issue -
State: closed - Opened by antoniaih about 1 year ago
Labels: docs
#2105 - Update to automatic CMT column update
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
#2104 - Changes to Wagner and QSS models
Issue -
State: closed - Opened by antoniaih about 1 year ago
#2103 - Documentation for structsearch for drug-metabolite
Issue -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
Labels: docs
#2102 - Make changes to structsearch for pkpd
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 2 comments
#2101 - Extend documentation for IV+ORAL models
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
Labels: docs
#2100 - Update MFL / modelsearch documentation
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
Labels: docs
#2099 - Update lower bounds for thetas
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 2 comments
#2098 - Correct default search space in AMD
Pull Request -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2097 - Use context manager
Pull Request -
State: closed - Opened by vrognas about 1 year ago
- 1 comment
Labels: dx
#2096 - write_model does not work for generic model
Issue -
State: closed - Opened by antoniaih about 1 year ago
Labels: bug
#2095 - Refactor `tools/external/nonmem/results.py`
Pull Request -
State: closed - Opened by vrognas about 1 year ago
- 3 comments
Labels: dx
#2094 - AMD for PK and PD part
Issue -
State: closed - Opened by antoniaih about 1 year ago
Labels: enhancement
#2093 - Bump traitlets from 5.10.0 to 5.10.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2092 - Bump numexpr from 2.8.6 to 2.8.7
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2091 - Add `test_create_base_model`
Issue -
State: open - Opened by vrognas about 1 year ago
- 1 comment
Labels: dx
#2090 - Create a user guide for the structsearch tool
Issue -
State: closed - Opened by rikardn about 1 year ago
- 2 comments
Labels: docs
#2089 - Negative lower bounds are converted into 0 in nonmem models
Issue -
State: closed - Opened by antoniaih about 1 year ago
- 6 comments
Labels: bug
#2088 - Support parsing `$DESIGN` models
Issue -
State: closed - Opened by vrognas about 1 year ago
Labels: enhancement
#2087 - Add test model for `$DESIGN`
Pull Request -
State: closed - Opened by vrognas about 1 year ago
- 2 comments
Labels: enhancement, dx
#2086 - Suggestion for more informative documentation on transform_blq()
Issue -
State: open - Opened by schaedeli about 1 year ago
- 2 comments
Labels: docs, enhancement
#2085 - transform_BLQ: M1 method appears not correctly implemented
Issue -
State: closed - Opened by schaedeli about 1 year ago
- 2 comments
Labels: bug
#2084 - Bump partd from 1.4.0 to 1.4.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#2083 - Extend logic in modelsearch to hinder instantaneous absorption and lagtime
Issue -
State: closed - Opened by JohanWBorg about 1 year ago
- 1 comment
#2082 - Add structsearch for TMMD in AMD
Pull Request -
State: closed - Opened by antoniaih about 1 year ago
- 1 comment
#2081 - Bump fsspec from 2023.9.1 to 2023.9.2
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies