Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / pharmpy/pharmpy issues and pull requests

#3397 - Reinstate assert in is_strictness_fulfilled

Issue - State: open - Opened by rikardn 29 days ago
Labels: bug

#3396 - Bump pyright from 1.1.385 to 1.1.386

Pull Request - State: closed - Opened by dependabot[bot] 30 days ago
Labels: dependencies

#3394 - Bump tox from 4.23.0 to 4.23.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3393 - Bump rich from 13.9.2 to 13.9.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3392 - Bump pydata-sphinx-theme from 0.15.4 to 0.16.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3391 - Risk of permission denied on multi user system

Issue - State: open - Opened by rikardn about 1 month ago - 1 comment

#3390 - error with PKPD (unable to find dosing records in the dataset)

Issue - State: open - Opened by rosemarychen99 about 1 month ago - 1 comment

#3389 - `pharmpy.modeling.calculate_eps_shrinkage`

Issue - State: open - Opened by king-of-poppk about 1 month ago - 7 comments
Labels: enhancement

#3388 - Bump networkx from 3.4.1 to 3.4.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3387 - Bump narwhals from 1.9.4 to 1.10.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3386 - the source nonmem file is changed after set_dataset

Issue - State: closed - Opened by rosemarychen99 about 1 month ago - 1 comment

#3385 - Bump cryptography from 43.0.1 to 43.0.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3384 - Bump markupsafe from 3.0.1 to 3.0.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3383 - Bump fsspec from 2024.9.0 to 2024.10.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3382 - Bump statsmodels from 0.14.2 to 0.14.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3381 - Error for PKPD search space

Issue - State: open - Opened by rosemarychen99 about 1 month ago - 2 comments
Labels: bug

#3380 - pkpd error

Issue - State: closed - Opened by rosemarychen99 about 1 month ago - 2 comments
Labels: bug

#3379 - Model gets stored twice in database if type is generic

Issue - State: open - Opened by stellabelin about 1 month ago
Labels: bug

#3377 - Bump tox from 4.22.0 to 4.23.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3376 - Bump narwhals from 1.9.3 to 1.9.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3375 - Bump psutil from 6.0.0 to 6.1.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3374 - Bump virtualenv from 20.26.6 to 20.27.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3373 - Bump the dask group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3372 - Bump pyright from 1.1.384 to 1.1.385

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3371 - Bump tox from 4.21.2 to 4.22.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3370 - First Version of SAMBA approach

Pull Request - State: closed - Opened by pengmanhht about 1 month ago

#3369 - Bump networkx from 3.4 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3368 - Bump sphinx from 8.0.2 to 8.1.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies

#3367 - Bump cloudpickle from 3.0.0 to 3.1.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3366 - Bump narwhals from 1.9.2 to 1.9.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3365 - Bump sphinx from 8.0.2 to 8.1.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago - 1 comment
Labels: dependencies

#3364 - Bump debugpy from 1.8.6 to 1.8.7

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3363 - Bump networkx from 3.3 to 3.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3362 - Bump pkginfo from 1.11.1 to 1.11.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3361 - Bump distlib from 0.3.8 to 0.3.9

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3360 - Bump check-manifest from 0.49 to 0.50

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3359 - Bump charset-normalizer from 3.3.2 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3358 - Bump pyright from 1.1.383 to 1.1.384

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3357 - Bump narwhals from 1.9.1 to 1.9.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3356 - Bump sphinx-tabs from 3.4.5 to 3.4.7

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3355 - Bump markupsafe from 3.0.0 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3354 - Bump jsonschema-specifications from 2023.12.1 to 2024.10.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 month ago
Labels: dependencies

#3353 - New tool for strictness and ranking

Issue - State: open - Opened by rikardn about 2 months ago
Labels: enhancement

#3352 - Bump markupsafe from 2.1.5 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3351 - Bump black from 24.8.0 to 24.10.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3350 - Bump numpy from 2.1.1 to 2.1.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3349 - Bump rich from 13.9.1 to 13.9.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3348 - Bump narwhals from 1.9.0 to 1.9.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3347 - Bump build from 1.2.2 to 1.2.2.post1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3346 - Bump toolz from 0.12.1 to 1.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3345 - Add seed-attribute to ExecutionStep

Issue - State: open - Opened by stellabelin about 2 months ago

#3344 - Bump tox from 4.21.1 to 4.21.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3343 - Bump ipython from 8.27.0 to 8.28.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3342 - Bump tomli from 2.0.1 to 2.0.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3341 - Bump tox from 4.21.0 to 4.21.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3340 - Add testing on macos-14 (arm) on GHA

Pull Request - State: closed - Opened by rikardn about 2 months ago

#3339 - Bump pyright from 1.1.382.post1 to 1.1.383

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3338 - Bump tox from 4.20.0 to 4.21.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3337 - Bump rich from 13.8.1 to 13.9.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3336 - Export is_strictness_criteria

Issue - State: closed - Opened by stellabelin about 2 months ago - 1 comment

#3335 - Bump symengine from 0.11.0 to 0.13.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3334 - Bump virtualenv from 20.26.5 to 20.26.6

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3333 - Bump pyright from 1.1.382.post0 to 1.1.382.post1

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3332 - Bump pyproject-hooks from 1.1.0 to 1.2.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3331 - Bump the dask group with 2 updates

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3330 - Bump pyright from 1.1.381 to 1.1.382.post0

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3329 - Bump prompt-toolkit from 3.0.47 to 3.0.48

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3328 - Metadata generated from amd is mostly incorrect

Issue - State: closed - Opened by rikardn about 2 months ago
Labels: bug

#3327 - Bump debugpy from 1.8.5 to 1.8.6

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#3326 - Add error message to output

Issue - State: closed - Opened by yahanhsutw about 2 months ago - 2 comments

#3325 - Bump tzdata from 2024.1 to 2024.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 months ago - 1 comment
Labels: dependencies

#3324 - Parent - Metabolite - pharmr 1.2.0

Issue - State: closed - Opened by SylvieRetout 2 months ago - 2 comments

#3323 - Bump keyring from 25.4.0 to 25.4.1

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3322 - Bump pandas from 2.2.2 to 2.2.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3320 - Remove tflite-warning

Issue - State: closed - Opened by stellabelin 2 months ago

#3319 - Bump tox from 4.19.0 to 4.20.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3318 - Bump pyright from 1.1.380 to 1.1.381

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3317 - Bump sympy from 1.13.2 to 1.13.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3316 - Bump pyproject-api from 1.7.2 to 1.8.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3315 - Raise InputValidationError in AMD

Issue - State: open - Opened by stellabelin 2 months ago

#3314 - Correct AMD example

Issue - State: open - Opened by stellabelin 2 months ago
Labels: docs

#3313 - Bump jupyter-client from 8.6.2 to 8.6.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3312 - Bump virtualenv from 20.26.4 to 20.26.5

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3311 - Bump filelock from 3.16.0 to 3.16.1

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3310 - Bump platformdirs from 4.3.3 to 4.3.6

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3309 - Bump pyproject-api from 1.7.1 to 1.7.2

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3308 - Bump keyring from 25.3.0 to 25.4.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3307 - Bump tox from 4.18.1 to 4.19.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#3306 - Propagate seed throughout tools

Issue - State: open - Opened by stellabelin 2 months ago - 2 comments

#3305 - Add trace messages to tools

Issue - State: open - Opened by stellabelin 2 months ago

#3304 - NMTRAN TIME parsing for hh:mm:ss raises

Issue - State: open - Opened by rikardn 2 months ago
Labels: bug

#3302 - Bump zipp from 3.20.1 to 3.20.2

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, python

#3301 - Bump platformdirs from 4.3.2 to 4.3.3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, python

#3300 - Bump distributed from 2024.8.2 to 2024.9.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 2 comments
Labels: dependencies, python

#3299 - Bump dask from 2024.8.2 to 2024.9.0

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, python

#3298 - Bump idna from 3.8 to 3.10

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies, python