Ecosyste.ms: Issues

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GitHub / phac-nml/irida-staramr-results issues and pull requests

#35 - results not including all Analysis for all hours of a specified start/end date

Issue - State: open - Opened by JeffreyThiessen almost 3 years ago - 1 comment
Labels: bug

#34 - Fixed conda build issue and added installation instructions

Pull Request - State: closed - Opened by JeffreyThiessen about 3 years ago

#33 - fixed pointfinder not being added to output

Pull Request - State: closed - Opened by JeffreyThiessen about 3 years ago

#32 - Progress bar

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#31 - Merge Development to Main

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#30 - Update Setup.py

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago - 1 comment

#29 - Update setup.py

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#28 - Progress Bar

Issue - State: closed - Opened by mariellemanlulu over 3 years ago
Labels: enhancement

#27 - Less api calls

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#26 - Logging and small changes

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#25 - Docs

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#24 - Refactor and other changes

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#23 - Date range filter

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#22 - Renamed output files as the created date of the Analysis run

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago - 2 comments

#20 - Unit test for irida_api.py

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#19 - Filter analysis that get output by date

Issue - State: closed - Opened by JeffreyThiessen over 3 years ago - 2 comments
Labels: enhancement

#18 - Output files should be named according to the datetime of when the analysis was run

Issue - State: closed - Opened by JeffreyThiessen over 3 years ago
Labels: enhancement

#17 - Add output files to directory based on project.

Issue - State: open - Opened by JeffreyThiessen over 3 years ago
Labels: enhancement

#16 - Fix formatting of Settings sheet. Add logging messages

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago

#15 - Remove extra column that contains the row index.

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago - 1 comment

#14 - Write results to an excel file #4

Pull Request - State: closed - Opened by mariellemanlulu over 3 years ago - 1 comment

#13 - Refactor irida_api so that functions takes project_id.

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#12 - User Configuration

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#11 - Make API calls consistent with iridauploader's functions

Issue - State: closed - Opened by mariellemanlulu almost 4 years ago

#10 - Fix ModuleNotFound error

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#9 - Added _get_link function and filter only amr detection analysis

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#8 - Main entry point #1

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#7 - Base script

Pull Request - State: closed - Opened by mariellemanlulu almost 4 years ago

#6 - Add end to end test

Issue - State: open - Opened by JeffreyThiessen almost 4 years ago

#5 - Add Unit Tests

Issue - State: open - Opened by JeffreyThiessen almost 4 years ago

#4 - Generate the excel file

Issue - State: closed - Opened by JeffreyThiessen almost 4 years ago

#3 - User configuration

Issue - State: closed - Opened by JeffreyThiessen almost 4 years ago - 1 comment

#2 - Filter analysis list to only return StarAMR analysis

Issue - State: closed - Opened by JeffreyThiessen almost 4 years ago

#1 - Create main entry point function

Issue - State: closed - Opened by JeffreyThiessen almost 4 years ago