Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / peptoneltd/adopt issues and pull requests

#41 - onxxruntime _create_inference_session: ValueError

Issue - State: closed - Opened by klaasdewaele over 1 year ago - 2 comments

#40 - module 'esm' has no attribute 'pretrained'

Issue - State: closed - Opened by agarrubio almost 2 years ago - 1 comment

#39 - Dev

Pull Request - State: closed - Opened by CFisicaro about 2 years ago - 1 comment

#38 - Nonexistant folder in dockerfile

Issue - State: closed - Opened by oliverdutton over 2 years ago - 2 comments

#37 - Fix ESM1v inference model input

Issue - State: open - Opened by CFisicaro over 2 years ago
Labels: bug

#36 - Refactor code + simple webservice

Pull Request - State: closed - Opened by fabio-peptone over 2 years ago

#35 - Dev

Pull Request - State: closed - Opened by CFisicaro over 2 years ago - 1 comment

#34 - Download of several databases when model type just esm1b

Issue - State: open - Opened by oliverdutton almost 3 years ago - 1 comment
Labels: bug

#33 - Add default options

Issue - State: closed - Opened by oliverdutton almost 3 years ago - 1 comment
Labels: enhancement

#32 - Change brmid in p_name

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: enhancement

#31 - Train a model on chezod (1325 + 117)

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#30 - @falkph please remove all the installation commands

Issue - State: closed - Opened by CFisicaro about 3 years ago
Labels: enhancement

#29 - Adopt example

Pull Request - State: closed - Opened by falkph about 3 years ago - 3 comments

#27 - Github action to update the adopt docker container after each release

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#26 - Add stability plot

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#26 - Add stability plot

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#25 - Viz routines

Pull Request - State: closed - Opened by CFisicaro about 3 years ago - 1 comment
Labels: feature

#24 - Separate examples from scripts

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: enhancement

#23 - Standardise inference phase.

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: enhancement

#22 - MSA extract script with GPU support

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#21 - Esm msa dev

Pull Request - State: closed - Opened by CFisicaro about 3 years ago

#20 - Develop

Pull Request - State: closed - Opened by CFisicaro about 3 years ago
Labels: feature

#19 - Interactive disorder pred

Pull Request - State: closed - Opened by CFisicaro about 3 years ago - 1 comment

#18 - Add notebooks description in README

Issue - State: closed - Opened by CFisicaro about 3 years ago
Labels: documentation

#17 - Attention viz

Pull Request - State: closed - Opened by CFisicaro about 3 years ago
Labels: feature

#16 - Add scripts usage in README

Issue - State: closed - Opened by CFisicaro about 3 years ago
Labels: documentation

#15 - Onnx runtime

Pull Request - State: closed - Opened by CFisicaro about 3 years ago
Labels: bug, enhancement

#14 - Web server integration

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: feature

#13 - Create documentation

Issue - State: open - Opened by CFisicaro about 3 years ago
Labels: documentation

#12 - Bad inference results

Issue - State: closed - Opened by CFisicaro about 3 years ago
Labels: bug

#11 - Super linter integration

Pull Request - State: closed - Opened by CFisicaro about 3 years ago

#10 - ci: add super-linter action

Pull Request - State: closed - Opened by CFisicaro about 3 years ago - 1 comment

#9 - Use argparse library in place of getopt library

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#8 - Add bash script for inference

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#7 - Add bash script for training

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#6 - Add CHANGELOG

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#5 - Add jupyter notebooks tutorial

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#4 - Add viz routines

Issue - State: open - Opened by CFisicaro over 3 years ago - 1 comment
Labels: feature

#3 - Use ESM as submodule once ADOPT goes public

Issue - State: closed - Opened by CFisicaro over 3 years ago - 1 comment
Labels: feature

#2 - Include ESM-MSA pre trained model

Issue - State: closed - Opened by CFisicaro over 3 years ago
Labels: feature

#1 - Better README

Issue - State: closed - Opened by ktamiola over 3 years ago - 1 comment
Labels: feature