Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / pdbeurope/arpeggio issues and pull requests
#31 - Arpeggio error: *** Open Babel Warning in PerceiveBondOrders Failed to kekulize aromatic bonds in OBMol::PerceiveBondOrders
Issue -
State: open - Opened by shoumo2021 2 days ago
#30 - Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows
Pull Request -
State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies
#29 - Allow missing chem_comp.name (fixes PDBeurope/arpeggio#28)
Pull Request -
State: open - Opened by xrobin 8 months ago
#28 - Arpeggio fails when chem_comp.name == "."
Issue -
State: open - Opened by m-crown 9 months ago
- 1 comment
#27 - fix: missing commas in config
Pull Request -
State: open - Opened by y1zhou 9 months ago
#26 - Arpeggio crashing for low occupancy ligands
Issue -
State: open - Opened by JavierSanchez-Utges 11 months ago
#25 - Updated GH workflow
Pull Request -
State: closed - Opened by sreenathnair 12 months ago
#24 - Added dependency for build job
Pull Request -
State: closed - Opened by sreenathnair 12 months ago
#23 - Separate build and deploy in GH workflow
Pull Request -
State: closed - Opened by sreenathnair 12 months ago
#22 - Bump up version
Pull Request -
State: closed - Opened by sreenathnair 12 months ago
#21 - Updated workflow file to fix the issue with pypi publishing
Pull Request -
State: closed - Opened by sreenathnair 12 months ago
#20 - Arpeggio not working for 5rfa preferred assembly
Issue -
State: open - Opened by JavierSanchez-Utges about 1 year ago
- 1 comment
#19 - Open Babel Warning in PerceiveBondOrders
Issue -
State: closed - Opened by Bae-SungHan about 1 year ago
- 7 comments
#18 - PDBE-6143: resolves missing _chem_comp.type issue reported in #17
Pull Request -
State: closed - Opened by roshkjr over 1 year ago
#17 - Removing component types for custom CIF files
Issue -
State: open - Opened by ljmartin almost 2 years ago
#16 - Resolve Pdbe 5434
Pull Request -
State: closed - Opened by roshkjr almost 2 years ago
#15 - Add workflow to publish to PyPI
Pull Request -
State: closed - Opened by otienoanyango almost 2 years ago
#14 - Pdbe 5434
Pull Request -
State: closed - Opened by roshkjr almost 2 years ago
#13 - arpeggio not working at all
Issue -
State: open - Opened by shoumo2021 over 2 years ago
- 1 comment
#12 - Match error disorder
Pull Request -
State: open - Opened by multimeric over 2 years ago
#11 - arpeggio fails on some PDB structures
Issue -
State: open - Opened by avivrosenberg over 2 years ago
#10 - `AttributeError` with newer `openbabel`
Issue -
State: open - Opened by multimeric almost 3 years ago
#9 - Remove check
Pull Request -
State: closed - Opened by mjrosengrant about 3 years ago
#8 - make show_contacts.py work with JSON output
Pull Request -
State: closed - Opened by reneeotten about 3 years ago
- 2 comments
#7 - AttributeError: 'OBAtom' object has no attribute 'IsHydrogen'
Issue -
State: open - Opened by luwei0917 about 3 years ago
- 1 comment
#6 - Fix conda new env instruction
Pull Request -
State: open - Opened by tonyyzy over 3 years ago
#5 - Issue #4: Update _establish_structure_mappping to not fail when serial number 0 is present
Pull Request -
State: open - Opened by mjrosengrant over 3 years ago
#4 - OBBioMatchError
Issue -
State: open - Opened by kuraisle over 3 years ago
- 5 comments
#3 - Unable to run with openbabel 3.x
Issue -
State: closed - Opened by eusebiu over 4 years ago
- 5 comments
Labels: enhancement
#2 - Run arpeggio from external app
Issue -
State: closed - Opened by eusebiu over 4 years ago
- 3 comments
Labels: enhancement
#1 - TypeError in process_protein_cli.py
Issue -
State: closed - Opened by lcscs12345 over 4 years ago
- 9 comments
Labels: bug