Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / paul-buerkner/brms issues and pull requests

#1463 - Parallelization settings not preserved when refitting via `update()`

Issue - State: closed - Opened by gserapio over 1 year ago - 4 comments
Labels: feature, post-processing

#1462 - GAM with t2() computed on RStudioServer (Linux): output for conditional_effect() incorrect on MacOS

Issue - State: closed - Opened by urskalbitzer over 1 year ago - 7 comments
Labels: duplicate

#1461 - non-matching draw subsets from `posterior_linpred`

Issue - State: closed - Opened by jsocolar over 1 year ago - 1 comment

#1460 - Amend #1459

Pull Request - State: closed - Opened by fweber144 over 1 year ago

#1459 - Fix #1457 (projpred `newdata` requiring more variables than necessary)

Pull Request - State: closed - Opened by fweber144 over 1 year ago - 7 comments

#1458 - `conditional_effects` produces an error if the `effects` argument contains `"method"`

Issue - State: closed - Opened by santikka over 1 year ago - 1 comment
Labels: bug

#1457 - Unnecessary variables required in `newdata` for predictions in projpred

Issue - State: closed - Opened by fweber144 over 1 year ago - 1 comment

#1456 - Check projpred version for latent projection

Pull Request - State: closed - Opened by fweber144 over 1 year ago - 4 comments

#1455 - Error for response-specific formulas (`categorical()` family)

Pull Request - State: closed - Opened by fweber144 over 1 year ago - 11 comments

#1454 - Rejecting initial value

Issue - State: closed - Opened by SP977 over 1 year ago

#1453 - Mixture cure models (Weibull and log-normal)

Pull Request - State: open - Opened by yananlong over 1 year ago - 4 comments

#1452 - Feature: Cure models

Issue - State: open - Opened by yananlong over 1 year ago - 1 comment
Labels: feature, family

#1451 - Latent projection

Pull Request - State: closed - Opened by fweber144 over 1 year ago - 9 comments

#1449 - mismatch btw family=shifted_lognormal and rshifted_lnorm()

Issue - State: closed - Opened by fusaroli over 1 year ago - 8 comments

#1448 - add hurdle_cumulative family to brms

Pull Request - State: closed - Opened by sjwild over 1 year ago - 10 comments

#1447 - Combining censoring with unstructured covariance matrices

Issue - State: closed - Opened by bjoernholzhauer over 1 year ago - 2 comments
Labels: feature

#1446 - Error when call to `arma` is very long

Issue - State: closed - Opened by mpdylan over 1 year ago - 2 comments
Labels: bug

#1445 - Bayesian Quantile Regression

Issue - State: closed - Opened by Steviey over 1 year ago - 2 comments

#1444 - About posterior distribution

Issue - State: closed - Opened by LfeiXie over 1 year ago - 1 comment

#1443 - kfold_compare errors only when criterion argument is supplied

Issue - State: closed - Opened by jflournoy over 1 year ago - 3 comments

#1442 - Fails to accept logical predictor values

Issue - State: closed - Opened by epkanol over 1 year ago - 2 comments

#1441 - Feature request: Are you open to a PR with a tutorial vignette + dataset?

Issue - State: closed - Opened by cjvanlissa over 1 year ago - 4 comments

#1440 - fcor does not work with se

Issue - State: closed - Opened by wds15 over 1 year ago - 1 comment

#1439 - Feature request: per group estimation of residual error structural terms

Issue - State: open - Opened by wds15 over 1 year ago
Labels: feature, autocorrelation

#1438 - Feature request: `reduce_sum` support for unstructured error terms

Issue - State: open - Opened by wds15 over 1 year ago
Labels: efficiency, feature, autocorrelation

#1436 - loo does not work with beta_binomial family

Issue - State: closed - Opened by andymilne over 1 year ago - 3 comments

#1435 - Unstructured (auto)correlation terms

Pull Request - State: closed - Opened by paul-buerkner over 1 year ago - 42 comments

#1434 - Feature request: nest `mi` terms in `reduce_sum` call

Issue - State: closed - Opened by saudiwin over 1 year ago - 2 comments
Labels: efficiency, Stan

#1433 - Many namespace collisions when using conflicted packages

Issue - State: closed - Opened by mattmoo over 1 year ago - 3 comments

#1432 - autocorrelation model does not compile with threading

Issue - State: closed - Opened by wds15 over 1 year ago - 1 comment
Labels: bug

#1431 - Typos in `horseshoe()` docs?

Issue - State: closed - Opened by fweber144 over 1 year ago - 3 comments
Labels: documentation

#1430 - feature request: Apache arrow for reading/writing arms files.

Issue - State: closed - Opened by go-bayes over 1 year ago - 3 comments
Labels: efficiency, feature

#1429 - Feature request: adding a hurdle cumulative family

Issue - State: closed - Opened by sjwild over 1 year ago - 24 comments
Labels: feature, family

#1428 - left-censored data in hurdle model

Issue - State: closed - Opened by lisamr over 1 year ago - 5 comments
Labels: family

#1427 - Issues with within chain threading and QR Decomp on HPC

Issue - State: closed - Opened by statslover123 over 1 year ago - 5 comments
Labels: bug

#1426 - Gumbel type in GEV distribution

Issue - State: closed - Opened by JackCaster over 1 year ago - 2 comments

#1424 - Slowdown in emmeans since version 2.14.0

Issue - State: closed - Opened by jkueser over 1 year ago - 2 comments
Labels: efficiency, post-processing

#1423 - Right-censored data

Issue - State: closed - Opened by simoncolumbus over 1 year ago - 6 comments
Labels: bug

#1422 - Setting upper and lower bounds for individual coefficient parameters

Issue - State: open - Opened by jcborders over 1 year ago - 2 comments
Labels: feature, priors

#1421 - Weibull proportional hazards as native family

Issue - State: open - Opened by anddis over 1 year ago - 6 comments
Labels: feature, family

#1420 - Reconsider deprecation of global priors for categorical/mulinomial?

Issue - State: closed - Opened by bwiernik over 1 year ago - 4 comments
Labels: feature, priors

#1419 - Zero inflated binomial -- trials -- Presence absence data

Issue - State: closed - Opened by charleygros over 1 year ago - 1 comment

#1418 - Threading option leads to indexing error: accessing element out of range

Issue - State: closed - Opened by erenelci over 1 year ago - 1 comment
Labels: bug

#1417 - Inconsistencies in Frechet parameterisation (?)

Issue - State: closed - Opened by markpayneatwork over 1 year ago - 4 comments
Labels: documentation

#1416 - qgen_extreme_value() is missing

Issue - State: closed - Opened by markpayneatwork over 1 year ago - 2 comments
Labels: feature, family

#1415 - was there a recent change in saved parameters?

Issue - State: closed - Opened by JWiley over 1 year ago - 1 comment

#1414 - [feature request] more flexible kfold_predict() applicable to external datasets

Issue - State: closed - Opened by fusaroli almost 2 years ago - 2 comments
Labels: feature, post-processing

#1409 - AR-correlated random effects; issue #1307

Pull Request - State: open - Opened by mpdylan almost 2 years ago - 10 comments

#1408 - improve doc of posterior_epred and posterior_linpred

Issue - State: open - Opened by isabellaghement almost 2 years ago - 5 comments
Labels: documentation

#1406 - brms issue

Issue - State: closed - Opened by jenniferroters almost 2 years ago - 2 comments

#1399 - Have coef return all nested random effects, not just one level

Issue - State: open - Opened by bakaburg1 almost 2 years ago - 4 comments
Labels: feature, post-processing

#1386 - posterior_epred with splines results in different results on different machines

Issue - State: closed - Opened by HaydenSchilling almost 2 years ago - 12 comments
Labels: bug, wontfix

#1376 - Warning: Declaration of arrays by placing brackets after a type is deprecated

Issue - State: closed - Opened by hsbadr almost 2 years ago - 11 comments
Labels: Stan

#1371 - Feature request: zero and one inflated proportional models

Issue - State: closed - Opened by ericward-noaa about 2 years ago - 4 comments
Labels: family

#1366 - Seemingly unrelated / Multivariate Probit Regression

Issue - State: closed - Opened by noamross about 2 years ago - 4 comments
Labels: feature, family

#1356 - class definition removed from ‘dbplyr’

Issue - State: closed - Opened by ASKurz about 2 years ago - 14 comments
Labels: bug

#1355 - "NAs are not allowed in grouping variables" error with re_formula=NULL in conditional_effects()

Issue - State: closed - Opened by eipi10 about 2 years ago - 6 comments
Labels: bug

#1354 - Add priorsense compatibility

Pull Request - State: closed - Opened by n-kall about 2 years ago - 14 comments

#1345 - The support of the GEV distribution is not enforced with the currently implemented xi transform

Issue - State: closed - Opened by danibarna about 2 years ago - 8 comments
Labels: feature, family

#1344 - mismatch between bridge_sampler result of a brms and stan object

Issue - State: closed - Opened by bnicenboim about 2 years ago - 5 comments

#1328 - Feature Request: conditional_effects() for sigmas

Issue - State: closed - Opened by thisisnickb over 2 years ago - 2 comments

#1317 - Gaussian Copulas

Issue - State: open - Opened by andrjohns over 2 years ago - 17 comments
Labels: feature

#1316 - Request: log link function for beta family

Issue - State: closed - Opened by mpirikL over 2 years ago - 5 comments
Labels: feature, family

#1315 - Allow brms to sample only from priors when the DV are all NAs

Issue - State: closed - Opened by bnicenboim over 2 years ago - 4 comments
Labels: feature

#1289 - Allow inclusion of stanvars into custom families to make them self contained objects

Issue - State: open - Opened by sims1253 over 2 years ago - 1 comment
Labels: feature, family

#1263 - .warmup meta column for inc_warmup = TRUE

Issue - State: closed - Opened by ASKurz over 2 years ago - 4 comments
Labels: feature, post-processing

#1261 - "Export" of redundant parameters with cmdstanr backend

Issue - State: closed - Opened by fweber144 over 2 years ago - 2 comments
Labels: feature

#1252 - Support for Model Profiling with cmdstanr backend

Issue - State: closed - Opened by ajnafa over 2 years ago - 3 comments
Labels: feature

#1235 - k-fold memory leak

Issue - State: closed - Opened by Famondir almost 3 years ago - 4 comments
Labels: feature, post-processing

#1199 - r-universe.dev

Issue - State: closed - Opened by aaelony-catasys almost 3 years ago - 4 comments
Labels: documentation

#1191 - Adding ordered beta regression to brms

Issue - State: open - Opened by saudiwin about 3 years ago - 4 comments
Labels: feature, family

#1186 - Define new SPDE smooth class

Issue - State: closed - Opened by lionel68 about 3 years ago - 6 comments
Labels: feature

#1185 - Matrix normal sampling to avoid direct computation of Kronecker products

Issue - State: closed - Opened by Jordan-Scott-Martin about 3 years ago - 14 comments
Labels: efficiency

#1139 - projpred: Pass `fit_elapsed_time` to `init_refmodel`

Pull Request - State: closed - Opened by paul-buerkner about 3 years ago - 6 comments

#1127 - Ability to use stats::filter or other distributed lag models in brms formulas

Issue - State: closed - Opened by DoktorMike over 3 years ago - 6 comments
Labels: feature

#1125 - Data "compression"

Issue - State: closed - Opened by StaffanBetner over 3 years ago - 5 comments
Labels: feature

#1113 - Generalized Pareto Distribution

Issue - State: closed - Opened by JackCaster over 3 years ago - 4 comments
Labels: feature, family, good first issue

#1105 - Using `diag_post_multiply` for random effects?

Issue - State: open - Opened by SteveBronder over 3 years ago - 5 comments
Labels: efficiency

#1094 - Priors: Impose bounds on more classes

Issue - State: closed - Opened by hsbadr over 3 years ago - 9 comments
Labels: feature

#1078 - Use Stan version 2.26 and its functions

Pull Request - State: closed - Opened by hsbadr over 3 years ago - 1 comment

#1077 - Use Stan 2.26 functions

Issue - State: closed - Opened by hsbadr over 3 years ago - 7 comments
Labels: efficiency

#1023 - allowing specification of mass matrix

Issue - State: closed - Opened by wds15 over 3 years ago - 1 comment
Labels: efficiency, feature

#1010 - Possibility of data leakage with `loo` on multiple imputed datasets

Issue - State: closed - Opened by al-obrien almost 4 years ago - 4 comments
Labels: feature, post-processing

#980 - Problems using emmeans with brms for Ordinal regression

Issue - State: closed - Opened by nvanzuy almost 4 years ago - 19 comments
Labels: feature, post-processing

#972 - BS variance modeling capabilities similar to existing WS variance modeling capabilities

Issue - State: closed - Opened by madelinecraft almost 4 years ago - 2 comments
Labels: feature, formula

#931 - Using estimated parameters in formulas

Issue - State: open - Opened by StaffanBetner about 4 years ago - 1 comment
Labels: feature, formula

#901 - Flexible grouping of monotonic effects

Issue - State: closed - Opened by fusaroli about 4 years ago - 5 comments
Labels: feature, formula

#888 - Equality constraints of parameters

Issue - State: open - Opened by tfjaeger about 4 years ago - 10 comments
Labels: feature, priors

#883 - feature request - functions to get and set initial values

Issue - State: open - Opened by drjhw about 4 years ago - 4 comments
Labels: feature, good first issue

#848 - Feature request: Delaporte distribution for skewed counts

Issue - State: closed - Opened by drjhw over 4 years ago - 3 comments
Labels: feature, family, good first issue

#805 - Consider implementing covariance regressions

Issue - State: closed - Opened by shannonajw over 4 years ago - 7 comments
Labels: feature, formula

#781 - Autoregressive Distributive Lag (ADL) model addition proposal

Issue - State: closed - Opened by mansillo over 4 years ago - 2 comments
Labels: feature, autocorrelation

#772 - Use multiple indexing in Stan code for varying effects

Issue - State: open - Opened by paul-buerkner over 4 years ago - 5 comments
Labels: efficiency, feature

#771 - possibly inefficient stan code generation for group-level coefficients for factors with many levels

Issue - State: closed - Opened by samkodes almost 5 years ago - 4 comments
Labels: efficiency, feature

#745 - create brmsfit object with empty $fit slot without need to compile model

Issue - State: closed - Opened by TedwardErker almost 5 years ago - 4 comments
Labels: feature, objects

#739 - Generalized Poisson distribution

Issue - State: open - Opened by paul-buerkner almost 5 years ago - 6 comments
Labels: feature, family, good first issue