Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / paul-buerkner/brms issues and pull requests
#1563 - second attempt to fix #1562
Pull Request -
State: closed - Opened by fusaroli 8 months ago
- 1 comment
#1562 - Stan error due to new array notation
Issue -
State: closed - Opened by fusaroli 8 months ago
- 12 comments
Labels: bug
#1561 - Add khat summary to cmdstanr-based variational stanfit
Pull Request -
State: closed - Opened by bmfazio 8 months ago
- 4 comments
#1560 - stanfit created from cmdstanr variational output missing a variable expected by rstan's summary method
Issue -
State: closed - Opened by bmfazio 8 months ago
- 3 comments
Labels: wontfix
#1559 - Special casing for lp_approx__
Pull Request -
State: closed - Opened by bmfazio 8 months ago
- 1 comment
#1558 - Unexpected behavior when using weights in a hurdle regression
Issue -
State: closed - Opened by Koalha 8 months ago
- 1 comment
#1557 - Error: Model predictions fail when model includes an interaction between monotonic effect and a scaled continuous variable
Issue -
State: closed - Opened by LukianAdams 8 months ago
- 3 comments
Labels: bug
#1556 - Make moment_match work natively with cmdstanr
Issue -
State: open - Opened by paul-buerkner 8 months ago
- 4 comments
Labels: feature
#1555 - zi mixture probs (draft)
Pull Request -
State: open - Opened by jsocolar 8 months ago
- 3 comments
#1554 - feature request – predict.brms: allow new values for random effects fit with splines
Issue -
State: open - Opened by kat3stewart 9 months ago
- 8 comments
Labels: feature
#1553 - add_criterion(, `loo`) with save_psis=TRUE doesn't do anything if save_psis=FALSE had been used before
Issue -
State: closed - Opened by avehtari 9 months ago
- 4 comments
Labels: documentation
#1552 - incorrect mixture probabilities returned when mixtures include hurdle families
Issue -
State: closed - Opened by jsocolar 9 months ago
- 7 comments
Labels: bug
#1551 - feature suggestion: posterior probability of being in the zero-inflation state
Issue -
State: open - Opened by jsocolar 9 months ago
- 10 comments
Labels: feature
#1550 - Update brms_threading.Rmd
Pull Request -
State: closed - Opened by jsocolar 9 months ago
- 1 comment
#1549 - feature request: force compilation with threading enabled
Issue -
State: open - Opened by jsocolar 9 months ago
- 1 comment
Labels: feature
#1548 - Update translation of silent argument to fix cmdstanr breakage
Pull Request -
State: closed - Opened by andrjohns 9 months ago
- 2 comments
#1547 - Error in `loo()`, `pp_check()`: mgcv::PredictMat can't find by variable
Issue -
State: closed - Opened by grcatlin 9 months ago
- 5 comments
Labels: bug
#1546 - Error: 'Explicit covariance terms can only be specified on 'mu'' when using an AR within a nlf
Issue -
State: closed - Opened by osupplisson 9 months ago
- 1 comment
#1545 - `silent` behavior change with `cmdstanr` 0.6.1
Issue -
State: closed - Opened by grcatlin 9 months ago
- 5 comments
Labels: bug
#1544 - caching of cmdstan binaries broken with >= 2.20 (for cmdstan >= 2.29)
Issue -
State: closed - Opened by wds15 10 months ago
- 10 comments
Labels: efficiency
#1543 - multivariate latent variable model (factor analysis) in brms
Issue -
State: closed - Opened by pcinereus 10 months ago
- 1 comment
#1542 - Inconsistency in `standata()` output between `resp_weights()` and `resp_trials()`
Issue -
State: closed - Opened by fweber144 10 months ago
- 3 comments
#1541 - Fix exclude_pars.R doc
Pull Request -
State: closed - Opened by ethanknights 11 months ago
- 1 comment
#1540 - Structured covariates don't allow for post-processing when `loop=FALSE`
Issue -
State: closed - Opened by wds15 11 months ago
- 3 comments
Labels: bug
#1539 - Too many thresholds in cumulative models
Issue -
State: closed - Opened by mkthalmann 11 months ago
- 1 comment
#1538 - Posterior predict in categorical family where refcat =NA
Issue -
State: closed - Opened by lauken13 11 months ago
- 1 comment
Labels: bug
#1537 - Can't set a lower bound directly on special coefficients (mi)
Issue -
State: closed - Opened by bmfazio 11 months ago
- 2 comments
Labels: bug
#1536 - Bug? Monotonic effect ignores ordered factor levels that are not present in the data (but defined as factor levels)
Issue -
State: closed - Opened by luwidmer 11 months ago
- 2 comments
Labels: bug
#1535 - `brms::t2()` example error, possibly related to `brms::conditional_smooths`.
Issue -
State: closed - Opened by hhp94 11 months ago
- 1 comment
#1534 - Maintain chain information from prediction functions
Issue -
State: open - Opened by n-kall 11 months ago
- 3 comments
Labels: feature
#1533 - Feature request: rescor for Bernoulli models
Issue -
State: closed - Opened by jokroese 12 months ago
- 3 comments
#1532 - loo not working with beta_binomial families
Issue -
State: closed - Opened by JCruk 12 months ago
- 4 comments
#1531 - Cannot produce emmeans from brmsfit if there is a quadratic term in the predictors
Issue -
State: closed - Opened by qdread 12 months ago
- 1 comment
Labels: bug
#1530 - How/is it possible to obtain intermediate models using brm function in Bayesian modeling studies
Issue -
State: closed - Opened by ZePedroBranco 12 months ago
- 2 comments
#1529 - Error when trying to print a `brmsprior` object without the source column
Issue -
State: closed - Opened by bmfazio 12 months ago
- 1 comment
#1528 - brms causing r session aborted in r 4.3.1
Issue -
State: closed - Opened by chientilee 12 months ago
- 1 comment
#1527 - Error in unserialize(node$con) : MultisessionFuture (<none>) failed to receive results from cluster RichSOCKnode
Issue -
State: closed - Opened by mohmdsh about 1 year ago
- 2 comments
#1526 - Error in brms cmpilation
Issue -
State: closed - Opened by AruhoTinka about 1 year ago
- 7 comments
#1525 - Modernize registration of S3 method for projpred generic
Pull Request -
State: closed - Opened by fweber144 about 1 year ago
- 3 comments
#1524 - `kfold()` fails with current `master` version
Issue -
State: closed - Opened by fweber144 about 1 year ago
- 1 comment
#1523 - Set `called_from_cvrefbuilder = TRUE` within `get_refmodel.brmsfit()`'s `cvrefbuilder` function
Pull Request -
State: closed - Opened by fweber144 about 1 year ago
- 2 comments
#1522 - Revert some ellipses from #1521
Pull Request -
State: closed - Opened by fweber144 about 1 year ago
- 1 comment
#1521 - Allow data validation to be skipped to improve `posterior_predict` performance with `newdata`
Pull Request -
State: closed - Opened by bmfazio about 1 year ago
- 3 comments
#1520 - `posterior_predict` fails when formula contains transformations of special terms and `newdata` is used
Issue -
State: closed - Opened by bmfazio about 1 year ago
- 2 comments
Labels: bug
#1519 - Error when using `posterior_linpred()`
Issue -
State: closed - Opened by isaactpetersen about 1 year ago
- 2 comments
#1518 - failed compilation
Issue -
State: closed - Opened by filpir328 about 1 year ago
- 1 comment
#1517 - Models does not sample with threading enabled
Issue -
State: closed - Opened by JCruk about 1 year ago
- 2 comments
#1516 - kfold returning elpd NAN
Issue -
State: closed - Opened by jscamac about 1 year ago
- 2 comments
#1515 - Error: conditional_effects() and conditional_smooths() stopped working
Issue -
State: closed - Opened by ZoeGold about 1 year ago
- 16 comments
Labels: bug
#1514 - Minor enhancements in Stan code in case of smoothed effects
Issue -
State: closed - Opened by fweber144 about 1 year ago
- 2 comments
Labels: efficiency, documentation
#1513 - Fitting a simple model hogs all memory and gets killed
Issue -
State: closed - Opened by jttoivon about 1 year ago
- 7 comments
#1512 - Feature request: avoid Rstan model conversion when exposing Stan functions
Issue -
State: closed - Opened by wds15 about 1 year ago
- 22 comments
Labels: feature
#1511 - log_lik fails with family = "bernoulli" if original outcome is all zeros but newdata has zeros and ones
Issue -
State: closed - Opened by bmfazio about 1 year ago
- 1 comment
Labels: bug
#1510 - Feature request: Multiple terms per autocorrelation class in formula ?
Issue -
State: open - Opened by osupplisson about 1 year ago
- 1 comment
Labels: feature
#1509 - multiresponse modeling
Issue -
State: open - Opened by TinyvanBoekel about 1 year ago
- 2 comments
Labels: feature
#1508 - Attempt to apply non-function using add_criterion for kfold after combine_models (backend = 'cmdstanr')
Issue -
State: closed - Opened by jflournoy about 1 year ago
- 3 comments
Labels: bug
#1507 - Identify vectorization problems of exposed functions from non-linear model with nested covariates
Issue -
State: open - Opened by wds15 about 1 year ago
- 3 comments
Labels: feature
#1506 - `posterior_predict` not working for fitted data
Issue -
State: closed - Opened by wds15 about 1 year ago
- 1 comment
#1505 - Use of `mi` with indexing leads to non-compiling Stan model with non-linear functions
Issue -
State: closed - Opened by wds15 about 1 year ago
- 2 comments
#1504 - Parsing fails if categorical predictor has spaces in its labels when combining with monotonic effect
Issue -
State: closed - Opened by rreareyes about 1 year ago
- 3 comments
Labels: bug
#1503 - Group K-fold CV for multilevel model fails
Issue -
State: closed - Opened by fweber144 about 1 year ago
- 2 comments
Labels: bug
#1502 - projpred-related seed fix and docs/NEWS
Pull Request -
State: closed - Opened by fweber144 about 1 year ago
- 3 comments
#1501 - Not specifying trials in logistic regression with y = 0 has trials set to 0
Issue -
State: closed - Opened by lauken13 about 1 year ago
- 2 comments
Labels: bug
#1500 - link to rpkg site
Pull Request -
State: closed - Opened by wibeasley about 1 year ago
- 1 comment
#1499 - Additional parameter initial value shows up in Wiener model
Issue -
State: closed - Opened by DominiqueMakowski about 1 year ago
- 1 comment
#1498 - set_prior(): spurious upper bound warning with wiener distributions
Issue -
State: closed - Opened by DominiqueMakowski about 1 year ago
- 1 comment
#1497 - Issue with `index` feature
Issue -
State: open - Opened by wds15 about 1 year ago
- 5 comments
Labels: feature
#1496 - Error: OpenCL is not supported by backend 'rstan' version 2.21.8.
Issue -
State: closed - Opened by alberto-arletti about 1 year ago
- 2 comments
#1495 - Compiling fails with cmdstan backend
Issue -
State: closed - Opened by JCruk about 1 year ago
- 5 comments
#1494 - Fix issue #1465
Pull Request -
State: closed - Opened by paul-buerkner about 1 year ago
#1493 - nested design difficulty and get_prior/set_prior mismatch
Issue -
State: closed - Opened by drjhw about 1 year ago
- 1 comment
#1492 - Support global shrinkage priors
Pull Request -
State: closed - Opened by paul-buerkner about 1 year ago
- 2 comments
Labels: feature
#1491 - convert data frame to class brmsprior
Issue -
State: closed - Opened by ASKurz about 1 year ago
- 5 comments
Labels: feature
#1490 - Opaque error message when specifying priors with custom distributional families
Issue -
State: closed - Opened by SimonCMills about 1 year ago
- 2 comments
#1489 - Stratified Cox regression
Issue -
State: open - Opened by wds15 about 1 year ago
- 2 comments
Labels: feature
#1488 - Structured covariates for non-linear functions
Issue -
State: closed - Opened by wds15 about 1 year ago
- 4 comments
Labels: feature
#1487 - Changing decimal delimiter to coma in brms
Issue -
State: closed - Opened by GuyHedelin about 1 year ago
- 1 comment
#1486 - Predicted data not consistent with priors
Issue -
State: closed - Opened by tmalsburg about 1 year ago
- 12 comments
#1485 - Predicted data not consistent with priors
Issue -
State: closed - Opened by tmalsburg about 1 year ago
#1484 - Linear Functionals of a Gaussian Process
Issue -
State: open - Opened by apeterson91 about 1 year ago
- 13 comments
Labels: feature
#1483 - Problems with `unstr` feature: prior setting & emmeans not working
Issue -
State: closed - Opened by wds15 about 1 year ago
- 11 comments
Labels: bug
#1482 - Enable access to priors pre-trained with neural networks
Issue -
State: closed - Opened by elizavetasemenova about 1 year ago
- 4 comments
Labels: feature
#1481 - Sampling progress not shown with cmstanr 0.5.3
Issue -
State: closed - Opened by bwiernik about 1 year ago
- 9 comments
#1480 - Many sampler warnings with cmdstanr, even with simple models
Issue -
State: closed - Opened by bwiernik about 1 year ago
- 6 comments
#1479 - add_criterion with moment_match=TRUE failing even when save_pars(all=TRUE) was set during model fit
Issue -
State: closed - Opened by eipi10 over 1 year ago
- 4 comments
#1478 - Add compress parameter to brm and write_brmsfit
Pull Request -
State: closed - Opened by mawilson1234 over 1 year ago
- 3 comments
#1477 - Issue 1476
Pull Request -
State: closed - Opened by paul-buerkner over 1 year ago
#1476 - RDS files saved by brms grow increasingly larger when brm is called from inside a function
Issue -
State: closed - Opened by mawilson1234 over 1 year ago
- 10 comments
Labels: feature
#1475 - `posterior_predict` fails when using softplus link with Fréchet distribution
Issue -
State: closed - Opened by flaviomorelli over 1 year ago
- 3 comments
Labels: bug
#1474 - stanvar doesnt work with a vector in x or name
Issue -
State: closed - Opened by bnicenboim over 1 year ago
- 7 comments
Labels: documentation
#1473 - Error: Can't find the following variable(s) in the output: lp_approx__
Issue -
State: closed - Opened by stephensrmmartin over 1 year ago
- 17 comments
Labels: bug
#1472 - b_Intercept vs prior_Intercept
Issue -
State: closed - Opened by bnicenboim over 1 year ago
- 5 comments
#1471 - Plotting brmshypothesis with "ranef" grouping factor generates as many repeated plots as group levels.
Issue -
State: closed - Opened by vascosa over 1 year ago
- 3 comments
Labels: bug
#1470 - Cannot remove Rtmp folder after brm call
Issue -
State: closed - Opened by GMFranceschini over 1 year ago
- 1 comment
#1469 - non-linear models and missing value modelling
Issue -
State: closed - Opened by wds15 over 1 year ago
- 2 comments
#1468 - Error: Family 'cumulative' requires either positive integers or ordered factors as responses
Issue -
State: closed - Opened by herryATcsiro over 1 year ago
- 1 comment
#1467 - Error in prepare predictions, non-numeric argument to pnorm
Issue -
State: closed - Opened by jflournoy over 1 year ago
- 4 comments
Labels: bug
#1466 - lower bound is specified as character string, not numeric
Issue -
State: closed - Opened by jflournoy over 1 year ago
- 4 comments
Labels: bug
#1465 - Spline model prediction inconsistencies when changing BLAS/LAPACK implementation
Issue -
State: closed - Opened by pmhogan over 1 year ago
- 41 comments
Labels: bug
#1464 - Monotonic effect with category specific effects
Issue -
State: open - Opened by shirdekel over 1 year ago
- 2 comments
Labels: feature, formula