Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / paul-buerkner/brms issues and pull requests

#1563 - second attempt to fix #1562

Pull Request - State: closed - Opened by fusaroli 8 months ago - 1 comment

#1562 - Stan error due to new array notation

Issue - State: closed - Opened by fusaroli 8 months ago - 12 comments
Labels: bug

#1561 - Add khat summary to cmdstanr-based variational stanfit

Pull Request - State: closed - Opened by bmfazio 8 months ago - 4 comments

#1559 - Special casing for lp_approx__

Pull Request - State: closed - Opened by bmfazio 8 months ago - 1 comment

#1558 - Unexpected behavior when using weights in a hurdle regression

Issue - State: closed - Opened by Koalha 8 months ago - 1 comment

#1556 - Make moment_match work natively with cmdstanr

Issue - State: open - Opened by paul-buerkner 8 months ago - 4 comments
Labels: feature

#1555 - zi mixture probs (draft)

Pull Request - State: open - Opened by jsocolar 8 months ago - 3 comments

#1554 - feature request – predict.brms: allow new values for random effects fit with splines

Issue - State: open - Opened by kat3stewart 9 months ago - 8 comments
Labels: feature

#1553 - add_criterion(, `loo`) with save_psis=TRUE doesn't do anything if save_psis=FALSE had been used before

Issue - State: closed - Opened by avehtari 9 months ago - 4 comments
Labels: documentation

#1552 - incorrect mixture probabilities returned when mixtures include hurdle families

Issue - State: closed - Opened by jsocolar 9 months ago - 7 comments
Labels: bug

#1551 - feature suggestion: posterior probability of being in the zero-inflation state

Issue - State: open - Opened by jsocolar 9 months ago - 10 comments
Labels: feature

#1550 - Update brms_threading.Rmd

Pull Request - State: closed - Opened by jsocolar 9 months ago - 1 comment

#1549 - feature request: force compilation with threading enabled

Issue - State: open - Opened by jsocolar 9 months ago - 1 comment
Labels: feature

#1548 - Update translation of silent argument to fix cmdstanr breakage

Pull Request - State: closed - Opened by andrjohns 9 months ago - 2 comments

#1547 - Error in `loo()`, `pp_check()`: mgcv::PredictMat can't find by variable

Issue - State: closed - Opened by grcatlin 9 months ago - 5 comments
Labels: bug

#1545 - `silent` behavior change with `cmdstanr` 0.6.1

Issue - State: closed - Opened by grcatlin 9 months ago - 5 comments
Labels: bug

#1544 - caching of cmdstan binaries broken with >= 2.20 (for cmdstan >= 2.29)

Issue - State: closed - Opened by wds15 10 months ago - 10 comments
Labels: efficiency

#1543 - multivariate latent variable model (factor analysis) in brms

Issue - State: closed - Opened by pcinereus 10 months ago - 1 comment

#1541 - Fix exclude_pars.R doc

Pull Request - State: closed - Opened by ethanknights 11 months ago - 1 comment

#1540 - Structured covariates don't allow for post-processing when `loop=FALSE`

Issue - State: closed - Opened by wds15 11 months ago - 3 comments
Labels: bug

#1539 - Too many thresholds in cumulative models

Issue - State: closed - Opened by mkthalmann 11 months ago - 1 comment

#1538 - Posterior predict in categorical family where refcat =NA

Issue - State: closed - Opened by lauken13 11 months ago - 1 comment
Labels: bug

#1537 - Can't set a lower bound directly on special coefficients (mi)

Issue - State: closed - Opened by bmfazio 11 months ago - 2 comments
Labels: bug

#1535 - `brms::t2()` example error, possibly related to `brms::conditional_smooths`.

Issue - State: closed - Opened by hhp94 11 months ago - 1 comment

#1534 - Maintain chain information from prediction functions

Issue - State: open - Opened by n-kall 11 months ago - 3 comments
Labels: feature

#1533 - Feature request: rescor for Bernoulli models

Issue - State: closed - Opened by jokroese 12 months ago - 3 comments

#1532 - loo not working with beta_binomial families

Issue - State: closed - Opened by JCruk 12 months ago - 4 comments

#1531 - Cannot produce emmeans from brmsfit if there is a quadratic term in the predictors

Issue - State: closed - Opened by qdread 12 months ago - 1 comment
Labels: bug

#1529 - Error when trying to print a `brmsprior` object without the source column

Issue - State: closed - Opened by bmfazio 12 months ago - 1 comment

#1528 - brms causing r session aborted in r 4.3.1

Issue - State: closed - Opened by chientilee 12 months ago - 1 comment

#1526 - Error in brms cmpilation

Issue - State: closed - Opened by AruhoTinka about 1 year ago - 7 comments

#1525 - Modernize registration of S3 method for projpred generic

Pull Request - State: closed - Opened by fweber144 about 1 year ago - 3 comments

#1524 - `kfold()` fails with current `master` version

Issue - State: closed - Opened by fweber144 about 1 year ago - 1 comment

#1522 - Revert some ellipses from #1521

Pull Request - State: closed - Opened by fweber144 about 1 year ago - 1 comment

#1519 - Error when using `posterior_linpred()`

Issue - State: closed - Opened by isaactpetersen about 1 year ago - 2 comments

#1518 - failed compilation

Issue - State: closed - Opened by filpir328 about 1 year ago - 1 comment

#1517 - Models does not sample with threading enabled

Issue - State: closed - Opened by JCruk about 1 year ago - 2 comments

#1516 - kfold returning elpd NAN

Issue - State: closed - Opened by jscamac about 1 year ago - 2 comments

#1515 - Error: conditional_effects() and conditional_smooths() stopped working

Issue - State: closed - Opened by ZoeGold about 1 year ago - 16 comments
Labels: bug

#1514 - Minor enhancements in Stan code in case of smoothed effects

Issue - State: closed - Opened by fweber144 about 1 year ago - 2 comments
Labels: efficiency, documentation

#1513 - Fitting a simple model hogs all memory and gets killed

Issue - State: closed - Opened by jttoivon about 1 year ago - 7 comments

#1512 - Feature request: avoid Rstan model conversion when exposing Stan functions

Issue - State: closed - Opened by wds15 about 1 year ago - 22 comments
Labels: feature

#1510 - Feature request: Multiple terms per autocorrelation class in formula ?

Issue - State: open - Opened by osupplisson about 1 year ago - 1 comment
Labels: feature

#1509 - multiresponse modeling

Issue - State: open - Opened by TinyvanBoekel about 1 year ago - 2 comments
Labels: feature

#1507 - Identify vectorization problems of exposed functions from non-linear model with nested covariates

Issue - State: open - Opened by wds15 about 1 year ago - 3 comments
Labels: feature

#1506 - `posterior_predict` not working for fitted data

Issue - State: closed - Opened by wds15 about 1 year ago - 1 comment

#1503 - Group K-fold CV for multilevel model fails

Issue - State: closed - Opened by fweber144 about 1 year ago - 2 comments
Labels: bug

#1502 - projpred-related seed fix and docs/NEWS

Pull Request - State: closed - Opened by fweber144 about 1 year ago - 3 comments

#1501 - Not specifying trials in logistic regression with y = 0 has trials set to 0

Issue - State: closed - Opened by lauken13 about 1 year ago - 2 comments
Labels: bug

#1500 - link to rpkg site

Pull Request - State: closed - Opened by wibeasley about 1 year ago - 1 comment

#1499 - Additional parameter initial value shows up in Wiener model

Issue - State: closed - Opened by DominiqueMakowski about 1 year ago - 1 comment

#1498 - set_prior(): spurious upper bound warning with wiener distributions

Issue - State: closed - Opened by DominiqueMakowski about 1 year ago - 1 comment

#1497 - Issue with `index` feature

Issue - State: open - Opened by wds15 about 1 year ago - 5 comments
Labels: feature

#1496 - Error: OpenCL is not supported by backend 'rstan' version 2.21.8.

Issue - State: closed - Opened by alberto-arletti about 1 year ago - 2 comments

#1495 - Compiling fails with cmdstan backend

Issue - State: closed - Opened by JCruk about 1 year ago - 5 comments

#1494 - Fix issue #1465

Pull Request - State: closed - Opened by paul-buerkner about 1 year ago

#1493 - nested design difficulty and get_prior/set_prior mismatch

Issue - State: closed - Opened by drjhw about 1 year ago - 1 comment

#1492 - Support global shrinkage priors

Pull Request - State: closed - Opened by paul-buerkner about 1 year ago - 2 comments
Labels: feature

#1491 - convert data frame to class brmsprior

Issue - State: closed - Opened by ASKurz about 1 year ago - 5 comments
Labels: feature

#1489 - Stratified Cox regression

Issue - State: open - Opened by wds15 about 1 year ago - 2 comments
Labels: feature

#1488 - Structured covariates for non-linear functions

Issue - State: closed - Opened by wds15 about 1 year ago - 4 comments
Labels: feature

#1487 - Changing decimal delimiter to coma in brms

Issue - State: closed - Opened by GuyHedelin about 1 year ago - 1 comment

#1486 - Predicted data not consistent with priors

Issue - State: closed - Opened by tmalsburg about 1 year ago - 12 comments

#1485 - Predicted data not consistent with priors

Issue - State: closed - Opened by tmalsburg about 1 year ago

#1484 - Linear Functionals of a Gaussian Process

Issue - State: open - Opened by apeterson91 about 1 year ago - 13 comments
Labels: feature

#1483 - Problems with `unstr` feature: prior setting & emmeans not working

Issue - State: closed - Opened by wds15 about 1 year ago - 11 comments
Labels: bug

#1482 - Enable access to priors pre-trained with neural networks

Issue - State: closed - Opened by elizavetasemenova about 1 year ago - 4 comments
Labels: feature

#1481 - Sampling progress not shown with cmstanr 0.5.3

Issue - State: closed - Opened by bwiernik about 1 year ago - 9 comments

#1480 - Many sampler warnings with cmdstanr, even with simple models

Issue - State: closed - Opened by bwiernik about 1 year ago - 6 comments

#1478 - Add compress parameter to brm and write_brmsfit

Pull Request - State: closed - Opened by mawilson1234 over 1 year ago - 3 comments

#1477 - Issue 1476

Pull Request - State: closed - Opened by paul-buerkner over 1 year ago

#1476 - RDS files saved by brms grow increasingly larger when brm is called from inside a function

Issue - State: closed - Opened by mawilson1234 over 1 year ago - 10 comments
Labels: feature

#1475 - `posterior_predict` fails when using softplus link with Fréchet distribution

Issue - State: closed - Opened by flaviomorelli over 1 year ago - 3 comments
Labels: bug

#1474 - stanvar doesnt work with a vector in x or name

Issue - State: closed - Opened by bnicenboim over 1 year ago - 7 comments
Labels: documentation

#1473 - Error: Can't find the following variable(s) in the output: lp_approx__

Issue - State: closed - Opened by stephensrmmartin over 1 year ago - 17 comments
Labels: bug

#1472 - b_Intercept vs prior_Intercept

Issue - State: closed - Opened by bnicenboim over 1 year ago - 5 comments

#1470 - Cannot remove Rtmp folder after brm call

Issue - State: closed - Opened by GMFranceschini over 1 year ago - 1 comment

#1469 - non-linear models and missing value modelling

Issue - State: closed - Opened by wds15 over 1 year ago - 2 comments

#1467 - Error in prepare predictions, non-numeric argument to pnorm

Issue - State: closed - Opened by jflournoy over 1 year ago - 4 comments
Labels: bug

#1466 - lower bound is specified as character string, not numeric

Issue - State: closed - Opened by jflournoy over 1 year ago - 4 comments
Labels: bug

#1465 - Spline model prediction inconsistencies when changing BLAS/LAPACK implementation

Issue - State: closed - Opened by pmhogan over 1 year ago - 41 comments
Labels: bug

#1464 - Monotonic effect with category specific effects

Issue - State: open - Opened by shirdekel over 1 year ago - 2 comments
Labels: feature, formula