Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / paul-buerkner/brms issues and pull requests

#1691 - Add periodic kernel for HSGP

Issue - State: open - Opened by avehtari 8 days ago - 1 comment
Labels: feature

#1690 - fun_von_mises.stan missing

Issue - State: closed - Opened by ps2-2 12 days ago - 5 comments

#1689 - Discrete Burr Type XII distribution

Issue - State: open - Opened by paul-buerkner 16 days ago
Labels: feature, family, good first issue

#1688 - Implement more GP kernels

Pull Request - State: closed - Opened by paul-buerkner 19 days ago - 1 comment

#1685 - Warning message when running models with `mi()` syntax?

Issue - State: closed - Opened by maxdrohde 30 days ago - 1 comment

#1684 - Support for future with cmdstanr?

Issue - State: closed - Opened by wds15 about 1 month ago - 5 comments
Labels: feature

#1682 - "observatio" typo

Pull Request - State: closed - Opened by athowes about 1 month ago - 1 comment

#1681 - Significant number of package conflicts in the brms package

Issue - State: closed - Opened by benscarlson about 1 month ago - 2 comments

#1680 - Setting 'decomp = QR' in an intercept-only model generates Stan code with unused variables

Issue - State: closed - Opened by wzbillings about 2 months ago - 2 comments
Labels: bug

#1679 - `lb` and `ub` as either `<NA>` or empty `""`

Issue - State: closed - Opened by athowes about 2 months ago - 2 comments

#1678 - remove outdated include statement

Pull Request - State: closed - Opened by venpopov about 2 months ago - 1 comment

#1677 - Weibull distribution with proportional hazards parametrisation

Issue - State: open - Opened by wds15 about 2 months ago - 2 comments
Labels: feature, family, good first issue

#1676 - Expose `brms:::validate_formula`?

Issue - State: open - Opened by athowes 2 months ago - 7 comments
Labels: feature

#1675 - R2D2 help file request

Issue - State: closed - Opened by jpkrooney 3 months ago - 5 comments
Labels: documentation

#1674 - Support moment matching LOO for LOO predictions

Issue - State: closed - Opened by avehtari 3 months ago - 1 comment
Labels: feature, post-processing

#1673 - Include Pathfinder in brm documentation?

Issue - State: closed - Opened by athowes 3 months ago - 1 comment
Labels: documentation

#1672 - `lprior` not available if `normalize = FALSE`

Issue - State: closed - Opened by n-kall 3 months ago - 3 comments
Labels: bug, documentation

#1670 - "Global state has changed" warning

Issue - State: closed - Opened by rempsyc 3 months ago - 1 comment

#1668 - misleading wording in multivariate model vignette?

Issue - State: closed - Opened by soskuthy 3 months ago - 1 comment
Labels: documentation

#1667 - Error in x$terms

Issue - State: closed - Opened by JCruk 3 months ago - 3 comments

#1666 - Error in fcor() for nonlinear model

Issue - State: closed - Opened by abstrathe 4 months ago - 1 comment
Labels: bug

#1665 - More documentation for loo(reloo_args)

Issue - State: closed - Opened by ASKurz 4 months ago - 2 comments
Labels: documentation

#1664 - Code for threaded categorical outcome models does not work

Issue - State: closed - Opened by chrishanretty 4 months ago - 4 comments
Labels: bug

#1663 - Fix creating stanfit from csv when rstan not loaded

Pull Request - State: closed - Opened by andrjohns 4 months ago - 1 comment

#1662 - Use draws from pathfinder posterior as inits

Issue - State: open - Opened by StaffanBetner 4 months ago - 1 comment
Labels: feature

#1661 - remove importMethodsFrom rstan summary

Pull Request - State: closed - Opened by venpopov 5 months ago - 1 comment

#1660 - Potential breaking change for brms 3.0: no special treatment for mu

Issue - State: open - Opened by venpopov 5 months ago
Labels: feature

#1659 - feature request: mixtures over groups / participants

Issue - State: open - Opened by pmusfeld 5 months ago
Labels: feature

#1658 - brms::log_lik creating zombies if cmdstanr is loaded

Issue - State: closed - Opened by avehtari 5 months ago - 13 comments
Labels: bug

#1657 - feature request: alternative approach for censored data

Issue - State: open - Opened by hansvancalster 5 months ago - 28 comments
Labels: feature

#1656 - car example uses deprecated formula

Issue - State: closed - Opened by avehtari 5 months ago - 1 comment
Labels: documentation

#1655 - R2D2 does not account for scale of the data

Issue - State: closed - Opened by n-kall 5 months ago - 4 comments
Labels: feature, documentation

#1654 - Possible bug in brms/emmeans integration

Issue - State: closed - Opened by wlandau 5 months ago - 20 comments

#1653 - Implement the brmsframe layer

Pull Request - State: closed - Opened by paul-buerkner 5 months ago

#1652 - Incomplete info in documentation regarding the combinations for `<group>=NA` and `re_formula=NULL`

Issue - State: closed - Opened by mattansb 5 months ago - 5 comments
Labels: documentation

#1651 - Random effects on thresholds in cumulative models are added to the model twice

Issue - State: closed - Opened by singmann 5 months ago - 3 comments
Labels: bug

#1650 - Error thrown with variational algorithms

Issue - State: closed - Opened by marcus-waldman 5 months ago - 6 comments
Labels: bug

#1649 - autoselect type for pp_check with group argument

Issue - State: open - Opened by venpopov 6 months ago - 1 comment
Labels: feature

#1648 - Error: Internal renaming led to duplicated names

Issue - State: closed - Opened by bhara033 6 months ago - 8 comments
Labels: bug

#1647 - Dynamic Panel Ordered Probit Model

Issue - State: open - Opened by DjakissO 6 months ago

#1646 - Prototype for set_inits()

Pull Request - State: open - Opened by venpopov 6 months ago - 8 comments
Labels: feature

#1645 - thoughts about a set_inits() or gen_inits() function?

Issue - State: open - Opened by venpopov 6 months ago - 3 comments
Labels: feature

#1644 - Bug when y ~ 0 + Intercept & family = 'poisson' & sample_prior = 'yes'

Issue - State: closed - Opened by half-normal 6 months ago - 1 comment
Labels: bug

#1643 - add loo_epred

Pull Request - State: closed - Opened by avehtari 6 months ago - 9 comments
Labels: feature

#1642 - Use of weights with cox() family

Issue - State: closed - Opened by cccnrc 6 months ago - 1 comment
Labels: bug

#1641 - Add loo_epred

Issue - State: closed - Opened by avehtari 6 months ago - 2 comments
Labels: feature

#1640 - Savage-Dickey density ratios aren't computed with QR decomposition

Issue - State: closed - Opened by josh-fiechter 6 months ago - 1 comment

#1639 - Fix p limits for some q* distribution functions; fix qgen_extreme_value

Pull Request - State: closed - Opened by venpopov 6 months ago - 1 comment

#1638 - The centred intercept `Intercept` is exported

Issue - State: closed - Opened by stefanocoretta 6 months ago - 4 comments

#1635 - Use certain internal brms functions in non-linear formulas

Issue - State: closed - Opened by dbarneche 6 months ago - 12 comments
Labels: feature

#1634 - cannot use tan_half link in custom family

Issue - State: closed - Opened by venpopov 7 months ago - 2 comments
Labels: bug

#1633 - use von_mises_lpdf directly instead of von_mises2_lpdf after next stan update

Issue - State: closed - Opened by venpopov 7 months ago - 3 comments
Labels: efficiency

#1632 - change default prior for von_mises mu tan_half link

Pull Request - State: closed - Opened by venpopov 7 months ago - 2 comments

#1631 - default prior for mu in von_mises with tan_half link

Issue - State: closed - Opened by venpopov 7 months ago - 1 comment

#1630 - brms/emmeans integration with nuisance variables

Issue - State: closed - Opened by wlandau 7 months ago - 2 comments

#1629 - Document equivalence of re_formula = NA and re_formula = ~0 in predict methods

Issue - State: closed - Opened by wpetry 7 months ago - 1 comment
Labels: documentation

#1628 - non-linear functions are forced to be in the global scope

Issue - State: closed - Opened by wds15 7 months ago - 3 comments

#1627 - posterior_predict for truncated 'skew_normal' returns NA

Issue - State: closed - Opened by avehtari 7 months ago - 1 comment

#1625 - A more informative message when brmsfit contains only warmup samples

Issue - State: closed - Opened by venpopov 7 months ago - 1 comment

#1624 - update doc and loo recommendations

Pull Request - State: closed - Opened by avehtari 7 months ago - 2 comments

#1623 - Allow read_csv_as_stanfit to work when inv_metric is not recorded

Pull Request - State: closed - Opened by venpopov 7 months ago - 2 comments

#1622 - Interval censoring fails due to differing dimensions of resp_cens arguments

Issue - State: closed - Opened by StaffanBetner 7 months ago - 2 comments
Labels: bug

#1621 - Syntax Error still not fixed with latest BRMS from GitHub

Issue - State: closed - Opened by rogerzzz123 7 months ago - 1 comment

#1620 - Unexpected results of `emtrends()` with meausurement error model

Issue - State: closed - Opened by kthayashi 7 months ago - 2 comments

#1619 - Read csv as stanfit v2 (alternative version)

Pull Request - State: closed - Opened by venpopov 7 months ago - 3 comments

#1616 - gam contrainted to pass through fixed value - add argument paraPen?

Issue - State: closed - Opened by beckyfisher 7 months ago - 1 comment

#1615 - make restructure an S3 method

Pull Request - State: closed - Opened by venpopov 7 months ago - 1 comment

#1614 - A better default prior for shape parameter of negative binomial

Issue - State: closed - Opened by avehtari 7 months ago - 9 comments
Labels: feature, priors

#1613 - Within-chain parallelization in Ubuntu (WSL) not working.

Issue - State: closed - Opened by qymera0 7 months ago - 2 comments

#1612 - Syntax error when adding a Gaussian Process term with cmdstanr

Issue - State: closed - Opened by FredericBlum 7 months ago - 4 comments

#1611 - make restructure() also into a generic method?

Issue - State: closed - Opened by venpopov 7 months ago - 3 comments

#1610 - Expose keep_mu option to users to make mu explicit in code and summary

Pull Request - State: closed - Opened by venpopov 7 months ago - 4 comments
Labels: feature

#1609 - moment_matching p_loo is wrong

Issue - State: closed - Opened by avehtari 7 months ago - 2 comments
Labels: bug

#1607 - support joint log score in kfold

Issue - State: closed - Opened by avehtari 7 months ago - 8 comments
Labels: feature

#1606 - Update readme and messages to take into account latest loo release

Issue - State: closed - Opened by avehtari 7 months ago - 5 comments
Labels: documentation

#1605 - kfold doc errors

Issue - State: closed - Opened by avehtari 7 months ago - 6 comments
Labels: documentation

#1604 - Proposal: transform get_prior, make_stancode and make_standata into S3 methods

Pull Request - State: closed - Opened by venpopov 7 months ago - 10 comments
Labels: feature

#1599 - Add an option to enforce the same parameter on monotonic effects

Issue - State: closed - Opened by ksuresh17 8 months ago - 4 comments

#1598 - Drop rows with missing values in the by variable.

Issue - State: closed - Opened by rubenarslan 8 months ago - 2 comments
Labels: bug

#1596 - custom families and `mu` parameter

Issue - State: closed - Opened by venpopov 8 months ago - 4 comments
Labels: feature

#1595 - Make shinystan optional

Issue - State: closed - Opened by alyst 8 months ago - 2 comments

#1594 - Support for handling censored data in PPC plots via imputation

Issue - State: open - Opened by avehtari 8 months ago - 2 comments
Labels: feature, post-processing

#1591 - Implement new fit algorithms: Laplace & Pathfinder

Issue - State: closed - Opened by wpetry 8 months ago - 6 comments
Labels: feature

#1590 - (potentially) Incorrect output of pvon_mises()

Issue - State: closed - Opened by venpopov 8 months ago - 3 comments
Labels: documentation

#1589 - "meanfield" variational method doesn't complete successfully

Issue - State: closed - Opened by colinorourke 9 months ago - 2 comments

#1588 - incorrect output of rmulti_normal()

Issue - State: closed - Opened by venpopov 9 months ago - 2 comments
Labels: bug

#1587 - Incorrect indexing when using custom likelihood with threading

Issue - State: closed - Opened by frankhezemans 9 months ago - 2 comments
Labels: documentation