Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / paul-buerkner/brms issues and pull requests

#1742 - `scale_global` in `horseshoe()` does not affect the result

Issue - State: closed - Opened by MatsuuraKentaro 11 days ago - 2 comments

#1741 - Seeking opinions on inference time marginalization in BRMS

Issue - State: open - Opened by lll6924 11 days ago - 1 comment

#1740 - store original bounday factor L for approximate GPs

Pull Request - State: closed - Opened by nicholasjclark 12 days ago - 3 comments
Labels: bug

#1739 - [bug] Incorrect predictions from approximate GP terms

Issue - State: closed - Opened by nicholasjclark 13 days ago - 6 comments
Labels: bug

#1738 - [Bug] Random effect in a non-linear ordinal model not compiling

Issue - State: open - Opened by atkissoncj 13 days ago - 2 comments

#1736 - [Feature request] Visualizing (different) priors

Issue - State: open - Opened by Temperche 14 days ago - 3 comments
Labels: feature, priors

#1735 - Align step() with Stan and add int_step()

Pull Request - State: closed - Opened by danielinteractive 17 days ago - 1 comment

#1734 - Mismatch of `step(0)` value between Stan and `brms`

Issue - State: closed - Opened by danielinteractive 18 days ago - 1 comment

#1733 - Generalize mi predictor terms

Pull Request - State: closed - Opened by paul-buerkner 18 days ago - 1 comment
Labels: feature

#1732 - `stanvar` generated integer array uses outdated Stan syntax

Issue - State: closed - Opened by wds15 20 days ago - 1 comment
Labels: bug

#1731 - [Feature request] Specify models with mathematical notation

Issue - State: open - Opened by stefanocoretta 20 days ago - 5 comments
Labels: feature

#1730 - brm ignores chains option for pathfinder, always does single chain

Issue - State: closed - Opened by benkay86 20 days ago - 1 comment
Labels: bug

#1729 - Create native Dirichlet multinomial family

Pull Request - State: closed - Opened by tom-peatman 24 days ago - 9 comments

#1728 - creating a custom_family with a categorical-like response (e.g., Dirichlet-multinomial)

Issue - State: closed - Opened by tom-peatman 28 days ago - 11 comments
Labels: feature

#1727 - Add `weights` argument to `gr()`, for #1719

Pull Request - State: open - Opened by bschneidr 28 days ago - 9 comments
Labels: feature

#1726 - updated docs of GP formula fn to include more details on hyperparameters

Pull Request - State: open - Opened by jr-leary7 29 days ago - 1 comment
Labels: documentation

#1725 - [Feature Request] Better documentation of the estimated parameters for Gaussian processes

Issue - State: open - Opened by jr-leary7 about 1 month ago - 9 comments
Labels: documentation

#1724 - lprior argument to prior, enabling separate lprior variables

Pull Request - State: open - Opened by n-kall about 1 month ago - 14 comments

#1722 - Update hypothesis.R to allow for backquoted parameters

Pull Request - State: open - Opened by stemangiola about 1 month ago - 1 comment

#1721 - Index Out of Range Error with com_poisson family

Issue - State: closed - Opened by MichaelSchatz 2 months ago - 2 comments
Labels: bug

#1719 - Feature request: Allow weights to also be specified at group level

Issue - State: open - Opened by bschneidr 2 months ago - 3 comments
Labels: feature

#1718 - Hierarchical Quantile Regression - Convergence Issues

Issue - State: closed - Opened by marcos060482 2 months ago - 1 comment

#1717 - Add the brms_seed to loo_R2

Pull Request - State: closed - Opened by mcol 2 months ago - 4 comments

#1716 - problem with censoring and shape

Issue - State: closed - Opened by jknape 2 months ago - 3 comments
Labels: bug

#1715 - How to set priors when computing ordinal model

Issue - State: closed - Opened by wenboyu0803 3 months ago - 3 comments

#1714 - fix misplaced paren in .loo_R2

Pull Request - State: closed - Opened by avehtari 3 months ago - 1 comment

#1713 - loo_R2: add seed argument

Issue - State: closed - Opened by avehtari 3 months ago - 1 comment
Labels: feature

#1712 - R2 doc improvements

Pull Request - State: closed - Opened by avehtari 3 months ago - 1 comment

#1711 - loo_R2 and further arguments passed to ‘posterior_epred’ and ‘log_lik’

Issue - State: open - Opened by avehtari 3 months ago - 1 comment
Labels: feature

#1710 - New data with bayes_R2 doesn't work

Issue - State: closed - Opened by ashwanijha1 3 months ago - 5 comments
Labels: bug

#1709 - [Feature Request] Allow Passing `save_dso = FALSE` with `rstan` backend

Issue - State: closed - Opened by emstruong 3 months ago - 7 comments

#1702 - Allow installation without RStan

Issue - State: open - Opened by WardBrian 4 months ago - 1 comment
Labels: feature

#1693 - Fixed typo in prepare_predictions.R

Pull Request - State: closed - Opened by mages 4 months ago - 1 comment

#1692 - Errors with new laplace and pathfinder algorithms

Issue - State: closed - Opened by jebyrnes 5 months ago - 1 comment

#1691 - Add periodic kernel for HSGP

Issue - State: open - Opened by avehtari 5 months ago - 1 comment
Labels: feature

#1690 - fun_von_mises.stan missing

Issue - State: closed - Opened by ps2-2 5 months ago - 5 comments

#1689 - Discrete Burr Type XII distribution

Issue - State: open - Opened by paul-buerkner 5 months ago
Labels: feature, family, good first issue

#1688 - Implement more GP kernels

Pull Request - State: closed - Opened by paul-buerkner 5 months ago - 1 comment

#1687 - Use random effects as predictors in formula via 're' terms

Pull Request - State: closed - Opened by paul-buerkner 5 months ago - 4 comments

#1685 - Warning message when running models with `mi()` syntax?

Issue - State: closed - Opened by maxdrohde 5 months ago - 1 comment

#1684 - Support for future with cmdstanr?

Issue - State: closed - Opened by wds15 6 months ago - 5 comments
Labels: feature

#1682 - "observatio" typo

Pull Request - State: closed - Opened by athowes 6 months ago - 1 comment

#1681 - Significant number of package conflicts in the brms package

Issue - State: closed - Opened by benscarlson 6 months ago - 2 comments

#1679 - `lb` and `ub` as either `<NA>` or empty `""`

Issue - State: closed - Opened by athowes 6 months ago - 2 comments

#1678 - remove outdated include statement

Pull Request - State: closed - Opened by venpopov 6 months ago - 1 comment

#1677 - Weibull distribution with proportional hazards parametrisation

Issue - State: open - Opened by wds15 6 months ago - 2 comments
Labels: feature, family, good first issue

#1676 - Expose `brms:::validate_formula`?

Issue - State: open - Opened by athowes 7 months ago - 7 comments
Labels: feature

#1675 - R2D2 help file request

Issue - State: closed - Opened by jpkrooney 7 months ago - 5 comments
Labels: documentation

#1674 - Support moment matching LOO for LOO predictions

Issue - State: closed - Opened by avehtari 7 months ago - 1 comment
Labels: feature, post-processing

#1673 - Include Pathfinder in brm documentation?

Issue - State: closed - Opened by athowes 7 months ago - 1 comment
Labels: documentation

#1672 - `lprior` not available if `normalize = FALSE`

Issue - State: closed - Opened by n-kall 7 months ago - 3 comments
Labels: bug, documentation

#1670 - "Global state has changed" warning

Issue - State: closed - Opened by rempsyc 8 months ago - 4 comments

#1668 - misleading wording in multivariate model vignette?

Issue - State: closed - Opened by soskuthy 8 months ago - 1 comment
Labels: documentation

#1667 - Error in x$terms

Issue - State: closed - Opened by JCruk 8 months ago - 3 comments

#1666 - Error in fcor() for nonlinear model

Issue - State: closed - Opened by abstrathe 8 months ago - 1 comment
Labels: bug

#1665 - More documentation for loo(reloo_args)

Issue - State: closed - Opened by ASKurz 8 months ago - 2 comments
Labels: documentation

#1664 - Code for threaded categorical outcome models does not work

Issue - State: closed - Opened by chrishanretty 9 months ago - 4 comments
Labels: bug

#1663 - Fix creating stanfit from csv when rstan not loaded

Pull Request - State: closed - Opened by andrjohns 9 months ago - 1 comment

#1662 - Use draws from pathfinder posterior as inits

Issue - State: open - Opened by StaffanBetner 9 months ago - 1 comment
Labels: feature

#1661 - remove importMethodsFrom rstan summary

Pull Request - State: closed - Opened by venpopov 9 months ago - 1 comment

#1660 - Potential breaking change for brms 3.0: no special treatment for mu

Issue - State: open - Opened by venpopov 9 months ago - 1 comment
Labels: feature

#1659 - feature request: mixtures over groups / participants

Issue - State: open - Opened by pmusfeld 9 months ago
Labels: feature

#1658 - brms::log_lik creating zombies if cmdstanr is loaded

Issue - State: open - Opened by avehtari 9 months ago - 15 comments
Labels: bug

#1657 - feature request: alternative approach for censored data

Issue - State: open - Opened by hansvancalster 9 months ago - 28 comments
Labels: feature

#1656 - car example uses deprecated formula

Issue - State: closed - Opened by avehtari 9 months ago - 1 comment
Labels: documentation

#1655 - R2D2 does not account for scale of the data

Issue - State: closed - Opened by n-kall 9 months ago - 4 comments
Labels: feature, documentation

#1654 - Possible bug in brms/emmeans integration

Issue - State: closed - Opened by wlandau 9 months ago - 20 comments

#1653 - Implement the brmsframe layer

Pull Request - State: closed - Opened by paul-buerkner 9 months ago

#1652 - Incomplete info in documentation regarding the combinations for `<group>=NA` and `re_formula=NULL`

Issue - State: closed - Opened by mattansb 9 months ago - 5 comments
Labels: documentation

#1651 - Random effects on thresholds in cumulative models are added to the model twice

Issue - State: closed - Opened by singmann 10 months ago - 3 comments
Labels: bug

#1650 - Error thrown with variational algorithms

Issue - State: closed - Opened by marcus-waldman 10 months ago - 6 comments
Labels: bug

#1649 - autoselect type for pp_check with group argument

Issue - State: open - Opened by venpopov 10 months ago - 1 comment
Labels: feature

#1648 - Error: Internal renaming led to duplicated names

Issue - State: closed - Opened by bhara033 10 months ago - 8 comments
Labels: bug

#1647 - Dynamic Panel Ordered Probit Model

Issue - State: open - Opened by DjakissO 10 months ago

#1646 - Prototype for set_inits()

Pull Request - State: open - Opened by venpopov 10 months ago - 8 comments
Labels: feature

#1645 - thoughts about a set_inits() or gen_inits() function?

Issue - State: open - Opened by venpopov 10 months ago - 3 comments
Labels: feature

#1644 - Bug when y ~ 0 + Intercept & family = 'poisson' & sample_prior = 'yes'

Issue - State: closed - Opened by half-normal 10 months ago - 1 comment
Labels: bug

#1643 - add loo_epred

Pull Request - State: closed - Opened by avehtari 11 months ago - 9 comments
Labels: feature

#1642 - Use of weights with cox() family

Issue - State: closed - Opened by cccnrc 11 months ago - 1 comment
Labels: bug

#1641 - Add loo_epred

Issue - State: closed - Opened by avehtari 11 months ago - 2 comments
Labels: feature

#1640 - Savage-Dickey density ratios aren't computed with QR decomposition

Issue - State: closed - Opened by josh-fiechter 11 months ago - 1 comment

#1639 - Fix p limits for some q* distribution functions; fix qgen_extreme_value

Pull Request - State: closed - Opened by venpopov 11 months ago - 1 comment

#1638 - The centred intercept `Intercept` is exported

Issue - State: closed - Opened by stefanocoretta 11 months ago - 4 comments

#1636 - Got unrecoverable error when trying to fit a model with only intercept

Issue - State: closed - Opened by chenshuai416 11 months ago - 4 comments

#1635 - Use certain internal brms functions in non-linear formulas

Issue - State: closed - Opened by dbarneche 11 months ago - 12 comments
Labels: feature

#1634 - cannot use tan_half link in custom family

Issue - State: closed - Opened by venpopov 11 months ago - 2 comments
Labels: bug

#1633 - use von_mises_lpdf directly instead of von_mises2_lpdf after next stan update

Issue - State: closed - Opened by venpopov 11 months ago - 3 comments
Labels: efficiency

#1632 - change default prior for von_mises mu tan_half link

Pull Request - State: closed - Opened by venpopov 11 months ago - 2 comments

#1631 - default prior for mu in von_mises with tan_half link

Issue - State: closed - Opened by venpopov 11 months ago - 1 comment

#1630 - brms/emmeans integration with nuisance variables

Issue - State: closed - Opened by wlandau 11 months ago - 2 comments